| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is mshA [H]
Identifier: 74316758
GI number: 74316758
Start: 784173
End: 785501
Strand: Direct
Name: mshA [H]
Synonym: Tbd_0740
Alternate gene names: 74316758
Gene position: 784173-785501 (Clockwise)
Preceding gene: 74316757
Following gene: 74316759
Centisome position: 26.95
GC content: 69.9
Gene sequence:
>1329_bases ATGTCACGACGCATTGCGCTCATCAGCGATCACGCTTCGCCGCTCGCGGTCCTCGGCGGCGTCGACAGCGGCGGCCAGAA CGTCTACGTTGCGCAGGTCGCGCGCGAGCTCGCGGCGCGCGGACACGAGGTCGACGTGTTCACGCGCCGCTACCGCAGCG GGCAGCCGCGCATCGTCGAGTGGTGCAGGAACGTGCGCGTCATCCATGTGCCGGCGGGGCCGGCGACCGACGTGCGCAAA GAGGACCTGCTGCCTTACATGGCCGATTTCGCGCGCTGGATGATCGGCTTTTGCCGGATGCGGGGTGGCTACGACCTGCT TCACGCCAACTTCTTCATGTCCGGCGTCGTCGCGCGGCAGGTGAGGCGCGCGCTCGGCACGCCGTTCGTGATTACCTTTC ATGCCCTCGGCCGCGTGCGTCGCAAGTATCAGCGCGAGGCGGACGAGTTTCCCGACGAGCGCGCAGAGATCGAGGAGCAG TTGGTCGCCGAAGCCGACGCGGTCATCGCCGAATGCCCGCAGGACAAATCCGACCTCGAGACGCTCTACGGTGCCGATCC GGCCAGGCTCCACGTCGTGCCGTGCGGCTTCGAGAAGGACGCGTTCCTGCCGCTGCCGCGCCACTTCGCGCGCCAGGTGC TCGGCATCGCGCCCGAAGAGCGCCTGCTCGTGAACGTCGGCAGGCTGGTGCCGCGCAAGGGCATCGACAACGCGATCCGT GGCCTCGGTTGTCTGCGGCGCGTATACGGCATCGACGCGACGCTGCTCGTCGTCGGCGGCAATTCGGACGTCCCCGATCC CCACGAGACGCCCGAGATCGGCCGGCTCGCCGAGGTCGCGGCGCACGACGCGGCCGGTCAGCGCGTGATCTTCACGGGGC GGCGCTCGCGCGAATTGCTCAAGCTTTATTACGCGGCCGCGGACGCGCTCGTGACGACGCCCTGGTACGAGCCCTTCGGC ATCACGCCGCTCGAAGCGATGGCCTGCGGGACGCCCGTGATCGGGTCCGACGTCGGCGGCCTCAAGTACACGATCCAGGA CGGCGAGACCGGCTTTCTCGTTCCACCCGACGACCCCGAGGCGCTCGGCGAGCGCTTCGCGCGCTTCTACGGCAGCCCGC GCCTGATGCGGCGCATGAGCCGCAGCGCGCTGCGCCGCGCCAACAGCTTGTTCACCTGGGACCGCGTCGTCGCCAGGCTC GATCGTGTCTACGCGCGCGCGGCGCGATGGGACGCGCCGGCGGCAATCGTCACCCCGTTGCGTCCGCCGCGGGCGCTCCC GCCCGAAGCCGAATTGCCCGGCGTGCTCGGAGGCGCGCTCTTGCCATGA
Upstream 100 bases:
>100_bases AATCAATGGCTTACGAACGTTTCCGCGAGCCGGGGCATGGCGGTTGCTTTTTTGCCATTCAAGTTTCCCATTCGGAGCCA CCCGTGTTTCGGGCGCCGCC
Downstream 100 bases:
>100_bases CCCGCGCCGTGTTTCTCGACAAGGACGGCACGCTCGTCGACGACGTGCCGTACAACGCCGACCCGACGAAGATCCGGCTC GCCGCGGGCGCCGGCCGCGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSRRIALISDHASPLAVLGGVDSGGQNVYVAQVARELAARGHEVDVFTRRYRSGQPRIVEWCRNVRVIHVPAGPATDVRK EDLLPYMADFARWMIGFCRMRGGYDLLHANFFMSGVVARQVRRALGTPFVITFHALGRVRRKYQREADEFPDERAEIEEQ LVAEADAVIAECPQDKSDLETLYGADPARLHVVPCGFEKDAFLPLPRHFARQVLGIAPEERLLVNVGRLVPRKGIDNAIR GLGCLRRVYGIDATLLVVGGNSDVPDPHETPEIGRLAEVAAHDAAGQRVIFTGRRSRELLKLYYAAADALVTTPWYEPFG ITPLEAMACGTPVIGSDVGGLKYTIQDGETGFLVPPDDPEALGERFARFYGSPRLMRRMSRSALRRANSLFTWDRVVARL DRVYARAARWDAPAAIVTPLRPPRALPPEAELPGVLGGALLP
Sequences:
>Translated_442_residues MSRRIALISDHASPLAVLGGVDSGGQNVYVAQVARELAARGHEVDVFTRRYRSGQPRIVEWCRNVRVIHVPAGPATDVRK EDLLPYMADFARWMIGFCRMRGGYDLLHANFFMSGVVARQVRRALGTPFVITFHALGRVRRKYQREADEFPDERAEIEEQ LVAEADAVIAECPQDKSDLETLYGADPARLHVVPCGFEKDAFLPLPRHFARQVLGIAPEERLLVNVGRLVPRKGIDNAIR GLGCLRRVYGIDATLLVVGGNSDVPDPHETPEIGRLAEVAAHDAAGQRVIFTGRRSRELLKLYYAAADALVTTPWYEPFG ITPLEAMACGTPVIGSDVGGLKYTIQDGETGFLVPPDDPEALGERFARFYGSPRLMRRMSRSALRRANSLFTWDRVVARL DRVYARAARWDAPAAIVTPLRPPRALPPEAELPGVLGGALLP >Mature_441_residues SRRIALISDHASPLAVLGGVDSGGQNVYVAQVARELAARGHEVDVFTRRYRSGQPRIVEWCRNVRVIHVPAGPATDVRKE DLLPYMADFARWMIGFCRMRGGYDLLHANFFMSGVVARQVRRALGTPFVITFHALGRVRRKYQREADEFPDERAEIEEQL VAEADAVIAECPQDKSDLETLYGADPARLHVVPCGFEKDAFLPLPRHFARQVLGIAPEERLLVNVGRLVPRKGIDNAIRG LGCLRRVYGIDATLLVVGGNSDVPDPHETPEIGRLAEVAAHDAAGQRVIFTGRRSRELLKLYYAAADALVTTPWYEPFGI TPLEAMACGTPVIGSDVGGLKYTIQDGETGFLVPPDDPEALGERFARFYGSPRLMRRMSRSALRRANSLFTWDRVVARLD RVYARAARWDAPAAIVTPLRPPRALPPEAELPGVLGGALLP
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=355, Percent_Identity=27.3239436619718, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI32564184, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 48857; Mature: 48726
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRIALISDHASPLAVLGGVDSGGQNVYVAQVARELAARGHEVDVFTRRYRSGQPRIVE CCCEEEEEECCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHH WCRNVRVIHVPAGPATDVRKEDLLPYMADFARWMIGFCRMRGGYDLLHANFFMSGVVARQ HHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VRRALGTPFVITFHALGRVRRKYQREADEFPDERAEIEEQLVAEADAVIAECPQDKSDLE HHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLYGADPARLHVVPCGFEKDAFLPLPRHFARQVLGIAPEERLLVNVGRLVPRKGIDNAIR HHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH GLGCLRRVYGIDATLLVVGGNSDVPDPHETPEIGRLAEVAAHDAAGQRVIFTGRRSRELL HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHH KLYYAAADALVTTPWYEPFGITPLEAMACGTPVIGSDVGGLKYTIQDGETGFLVPPDDPE HHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCHH ALGERFARFYGSPRLMRRMSRSALRRANSLFTWDRVVARLDRVYARAARWDAPAAIVTPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCC RPPRALPPEAELPGVLGGALLP CCCCCCCCCCCCCCHHCCCCCC >Mature Secondary Structure SRRIALISDHASPLAVLGGVDSGGQNVYVAQVARELAARGHEVDVFTRRYRSGQPRIVE CCEEEEEECCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHH WCRNVRVIHVPAGPATDVRKEDLLPYMADFARWMIGFCRMRGGYDLLHANFFMSGVVARQ HHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VRRALGTPFVITFHALGRVRRKYQREADEFPDERAEIEEQLVAEADAVIAECPQDKSDLE HHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLYGADPARLHVVPCGFEKDAFLPLPRHFARQVLGIAPEERLLVNVGRLVPRKGIDNAIR HHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH GLGCLRRVYGIDATLLVVGGNSDVPDPHETPEIGRLAEVAAHDAAGQRVIFTGRRSRELL HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHH KLYYAAADALVTTPWYEPFGITPLEAMACGTPVIGSDVGGLKYTIQDGETGFLVPPDDPE HHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCHH ALGERFARFYGSPRLMRRMSRSALRRANSLFTWDRVVARLDRVYARAARWDAPAAIVTPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCC RPPRALPPEAELPGVLGGALLP CCCCCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA