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The map label for this gene is rfaF [C]

Identifier: 74316756

GI number: 74316756

Start: 780903

End: 781946

Strand: Reverse

Name: rfaF [C]

Synonym: Tbd_0738

Alternate gene names: 74316756

Gene position: 781946-780903 (Counterclockwise)

Preceding gene: 74316762

Following gene: 74316753

Centisome position: 26.87

GC content: 74.23

Gene sequence:

>1044_bases
ATGGAGAGCTTCGACGCGTCCCCCGCCTCACCGAGCTGGTTCGACCGCCACGCGCCCGCGTCGGTCGTCGTCTTCCGCGC
GCTTCAGGTCGGCGACCTGCTGTGTGCGGTGCCGGCCCTGCGCGCGCTGCGCTGGCGCCTGCCCGACGCGCGCATCGCGC
TCGTCGGCCTGCCCTGGGCCGAGCAGTTCGTCGAGCGCTTCGCGATGCTGGTCAACGAATTCATTGCTTTTCCCGGCCAC
CCCGGCCTGCCCGAACGGCAGCCGGCGCCCGAGGCCTATCCGCCTTTCCTCGAATCCGTGCGCGCCCGCCGCTTCGATCT
TGCGCTGCAGCTGCACGGCAACGGCCGCATCGTCAACGCGCTCGTCGCACAGTTCGGCACGGTCTGGCAGGCCGGCTTCG
ACGACGACGCGAGCGCGCGCGGCGCGAGCTTCCTGCGCTATCCGGCGCGCGGCCACGAGATCCACCGCCTGCTCGCGCTG
ACGACGCACCTCGGCGCGCCGCCGCGCGGCGACCACCTCCGCTTTCCCCTGCTCGACGCCGACGCGCGCGAACTCGCGCG
CTCGGGCCTCAAACTCCCGCCGCCGGGCGCCCCTTACGTCTGCCTGCACCCCGGCGCGCGCGACGCCGCGCGACGCTGGC
CGCCCGAGCGCTTCGCCGCGCTCGGCGACGCGCTCGCCGCGCACGGACTGCAGGTCGTCCTGACCGGATCCGAGGCCGAG
CGGCCGCTCACCGCGGCCGTGTCGGCGGCGATGTGCGCACCCGCCTTCGACGCCGCTGCCGCCATCTCGCTCGGCGCGAT
GGCCCATCTCATGGCCGGCGCGGCGCTCCTCGTCTGCAACGACACCGGCACCTCGCACATCGCCTGCGGCCTCGGCCTGC
CGAGCGTCGTGATCTTCCGGGCTTCCGAGATGAGCCGCTGGGCGCCGCTCGACCCGTCGTGCCACCGTGCCGTCTGGGAC
CCGCTCGGAATCCGCGCTCAGGCCGTGCTCGACGAGGCGCTCGACCTGCTCGTCAGCACCTCGGCGAGCAGCGCGAGCGC
CTGA

Upstream 100 bases:

>100_bases
CTGACGGCGTCCCCCGATCCCCCGCTCGGCAAGAAGCATGCCGCCGCCGCCTGCGGGCACGATTGCTGCTGGAACGGGGC
ACCCCCTTCCGGAGACAGCC

Downstream 100 bases:

>100_bases
TCGCGCACCGCGTCGACCGATACGGCGTCGACGAAGCTCACGTCGTGTGCGCAGCGCGCGCCGACGTTGTCCTGCCCGCA
CACCGGGCAGCGGGGGTCGA

Product: putative LPS biosynthesis related glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Transferase; Glycosyl Transferase; LPS Biosynthesis Related Glycosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase II; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Heptosyltransferase; ADP-HeptoseLPS Heptosyltransferase

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MESFDASPASPSWFDRHAPASVVVFRALQVGDLLCAVPALRALRWRLPDARIALVGLPWAEQFVERFAMLVNEFIAFPGH
PGLPERQPAPEAYPPFLESVRARRFDLALQLHGNGRIVNALVAQFGTVWQAGFDDDASARGASFLRYPARGHEIHRLLAL
TTHLGAPPRGDHLRFPLLDADARELARSGLKLPPPGAPYVCLHPGARDAARRWPPERFAALGDALAAHGLQVVLTGSEAE
RPLTAAVSAAMCAPAFDAAAAISLGAMAHLMAGAALLVCNDTGTSHIACGLGLPSVVIFRASEMSRWAPLDPSCHRAVWD
PLGIRAQAVLDEALDLLVSTSASSASA

Sequences:

>Translated_347_residues
MESFDASPASPSWFDRHAPASVVVFRALQVGDLLCAVPALRALRWRLPDARIALVGLPWAEQFVERFAMLVNEFIAFPGH
PGLPERQPAPEAYPPFLESVRARRFDLALQLHGNGRIVNALVAQFGTVWQAGFDDDASARGASFLRYPARGHEIHRLLAL
TTHLGAPPRGDHLRFPLLDADARELARSGLKLPPPGAPYVCLHPGARDAARRWPPERFAALGDALAAHGLQVVLTGSEAE
RPLTAAVSAAMCAPAFDAAAAISLGAMAHLMAGAALLVCNDTGTSHIACGLGLPSVVIFRASEMSRWAPLDPSCHRAVWD
PLGIRAQAVLDEALDLLVSTSASSASA
>Mature_347_residues
MESFDASPASPSWFDRHAPASVVVFRALQVGDLLCAVPALRALRWRLPDARIALVGLPWAEQFVERFAMLVNEFIAFPGH
PGLPERQPAPEAYPPFLESVRARRFDLALQLHGNGRIVNALVAQFGTVWQAGFDDDASARGASFLRYPARGHEIHRLLAL
TTHLGAPPRGDHLRFPLLDADARELARSGLKLPPPGAPYVCLHPGARDAARRWPPERFAALGDALAAHGLQVVLTGSEAE
RPLTAAVSAAMCAPAFDAAAAISLGAMAHLMAGAALLVCNDTGTSHIACGLGLPSVVIFRASEMSRWAPLDPSCHRAVWD
PLGIRAQAVLDEALDLLVSTSASSASA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36973; Mature: 36973

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFDASPASPSWFDRHAPASVVVFRALQVGDLLCAVPALRALRWRLPDARIALVGLPWA
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHH
EQFVERFAMLVNEFIAFPGHPGLPERQPAPEAYPPFLESVRARRFDLALQLHGNGRIVNA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHH
LVAQFGTVWQAGFDDDASARGASFLRYPARGHEIHRLLALTTHLGAPPRGDHLRFPLLDA
HHHHHHHHHCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DARELARSGLKLPPPGAPYVCLHPGARDAARRWPPERFAALGDALAAHGLQVVLTGSEAE
CHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCC
RPLTAAVSAAMCAPAFDAAAAISLGAMAHLMAGAALLVCNDTGTSHIACGLGLPSVVIFR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEEEEE
ASEMSRWAPLDPSCHRAVWDPLGIRAQAVLDEALDLLVSTSASSASA
CHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESFDASPASPSWFDRHAPASVVVFRALQVGDLLCAVPALRALRWRLPDARIALVGLPWA
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHH
EQFVERFAMLVNEFIAFPGHPGLPERQPAPEAYPPFLESVRARRFDLALQLHGNGRIVNA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHH
LVAQFGTVWQAGFDDDASARGASFLRYPARGHEIHRLLALTTHLGAPPRGDHLRFPLLDA
HHHHHHHHHCCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCC
DARELARSGLKLPPPGAPYVCLHPGARDAARRWPPERFAALGDALAAHGLQVVLTGSEAE
CHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCC
RPLTAAVSAAMCAPAFDAAAAISLGAMAHLMAGAALLVCNDTGTSHIACGLGLPSVVIFR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEEEEE
ASEMSRWAPLDPSCHRAVWDPLGIRAQAVLDEALDLLVSTSASSASA
CHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA