| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316753
Identifier: 74316753
GI number: 74316753
Start: 778168
End: 779067
Strand: Reverse
Name: 74316753
Synonym: Tbd_0735
Alternate gene names: NA
Gene position: 779067-778168 (Counterclockwise)
Preceding gene: 74316756
Following gene: 74316752
Centisome position: 26.77
GC content: 69.56
Gene sequence:
>900_bases ATGAGTGTCGTCCTCAAGAACCGCCACCTCGAAGTCACGGTGCGCCCCGAGTGCGGGGGCCGCATCGACCAGATCACCGA TCTCGCACGCGCCAAGGAATGGCTCTGGCACCCGCCGGAGTATGACCCCGACGCCGCCCGCCCGGTGACGGAAGCGGCTT CGTTCGACGCCTGCTGGCAGGGCGGCTTCGAGGAGATGTTTCCGAACGACGCGGCGTGCACGGTCGACGGCCGCGCGCTG CCCGACCATGGCGAAACCTGGTCCGCGGTCTGGGACTCCAAGCTCGACGCGCCGCACCGCCTCGCCCTCACGCTCGAGTG CCGGACCGTTCCGGTGCGTCTCGAAAAGCTGCTCGTGCTCGAACCCGACGCCCCGGTCCTGCATCTGCGCTACCGCATGA CCAACCTGGGCGCGTCCCCGGTGCCGTGCATGCTCAAGCTCCACCCCGCGCTCGCGATCGAGGAAGGCGACGAAATCGAC CTGCCCGACTGCACCGTCGAGGCCGTCGCGATCGAATTCAGCCGCCTGATCGGACGCGAGGGCAAGACGCGCTGGCCGGA CGGCCGCACCGCCGACGGCGGCACCGTGCGGCTCGACCGCACCCGCCCCGCGGACAGCGGCCTGCGCGAGTTCGTCTACT GCTCGGCGCTCGAAGAAGGACGCTGCGGCGTGCGCAACGCGCGGACCGGCAGCCGGCTCAGCTTCGCGTTCGACCGCGCC GCCTTCCCGTTCGTCTGGGTGTTCCAGAGCTACGGCGGCTTCAACGGCCACTACGTGCTGATGCTCGAACCCTGCACCAG CAAGCCCTACGACCTGCGCGAAGTGATCGCGCGCGACACCGCGTTCTGGCTCGGTCGCGACACGATGCGCACGCTCGACC TCAGTCTGCACGTCGACTGA
Upstream 100 bases:
>100_bases TGACGAAGGGGGAAACCCGGCATTCAGCAGAAAGCGTGCCCATCTCCACCCCGGCACGTGGCTTGCAAGATCGTTCGCAT CGCCGTCTTCCGCCAGAAAC
Downstream 100 bases:
>100_bases GTCCCTGCCGCAAACCCTAGACTGGAGGAAGAAACGTGGCCGCACTGACTGACCAGGTGGTAGTCGTCACCGGAGGCGGG CGAGGCCTGGGCGCCTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSVVLKNRHLEVTVRPECGGRIDQITDLARAKEWLWHPPEYDPDAARPVTEAASFDACWQGGFEEMFPNDAACTVDGRAL PDHGETWSAVWDSKLDAPHRLALTLECRTVPVRLEKLLVLEPDAPVLHLRYRMTNLGASPVPCMLKLHPALAIEEGDEID LPDCTVEAVAIEFSRLIGREGKTRWPDGRTADGGTVRLDRTRPADSGLREFVYCSALEEGRCGVRNARTGSRLSFAFDRA AFPFVWVFQSYGGFNGHYVLMLEPCTSKPYDLREVIARDTAFWLGRDTMRTLDLSLHVD
Sequences:
>Translated_299_residues MSVVLKNRHLEVTVRPECGGRIDQITDLARAKEWLWHPPEYDPDAARPVTEAASFDACWQGGFEEMFPNDAACTVDGRAL PDHGETWSAVWDSKLDAPHRLALTLECRTVPVRLEKLLVLEPDAPVLHLRYRMTNLGASPVPCMLKLHPALAIEEGDEID LPDCTVEAVAIEFSRLIGREGKTRWPDGRTADGGTVRLDRTRPADSGLREFVYCSALEEGRCGVRNARTGSRLSFAFDRA AFPFVWVFQSYGGFNGHYVLMLEPCTSKPYDLREVIARDTAFWLGRDTMRTLDLSLHVD >Mature_298_residues SVVLKNRHLEVTVRPECGGRIDQITDLARAKEWLWHPPEYDPDAARPVTEAASFDACWQGGFEEMFPNDAACTVDGRALP DHGETWSAVWDSKLDAPHRLALTLECRTVPVRLEKLLVLEPDAPVLHLRYRMTNLGASPVPCMLKLHPALAIEEGDEIDL PDCTVEAVAIEFSRLIGREGKTRWPDGRTADGGTVRLDRTRPADSGLREFVYCSALEEGRCGVRNARTGSRLSFAFDRAA FPFVWVFQSYGGFNGHYVLMLEPCTSKPYDLREVIARDTAFWLGRDTMRTLDLSLHVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33570; Mature: 33439
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVLKNRHLEVTVRPECGGRIDQITDLARAKEWLWHPPEYDPDAARPVTEAASFDACWQ CEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHC GGFEEMFPNDAACTVDGRALPDHGETWSAVWDSKLDAPHRLALTLECRTVPVRLEKLLVL CCHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEECCEEEEEEEEE EPDAPVLHLRYRMTNLGASPVPCMLKLHPALAIEEGDEIDLPDCTVEAVAIEFSRLIGRE CCCCCEEEEEEEEHHCCCCCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC GKTRWPDGRTADGGTVRLDRTRPADSGLREFVYCSALEEGRCGVRNARTGSRLSFAFDRA CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC AFPFVWVFQSYGGFNGHYVLMLEPCTSKPYDLREVIARDTAFWLGRDTMRTLDLSLHVD CCCEEEEEHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC >Mature Secondary Structure SVVLKNRHLEVTVRPECGGRIDQITDLARAKEWLWHPPEYDPDAARPVTEAASFDACWQ EEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHC GGFEEMFPNDAACTVDGRALPDHGETWSAVWDSKLDAPHRLALTLECRTVPVRLEKLLVL CCHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEECCEEEEEEEEE EPDAPVLHLRYRMTNLGASPVPCMLKLHPALAIEEGDEIDLPDCTVEAVAIEFSRLIGRE CCCCCEEEEEEEEHHCCCCCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC GKTRWPDGRTADGGTVRLDRTRPADSGLREFVYCSALEEGRCGVRNARTGSRLSFAFDRA CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC AFPFVWVFQSYGGFNGHYVLMLEPCTSKPYDLREVIARDTAFWLGRDTMRTLDLSLHVD CCCEEEEEHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA