| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fecA [H]
Identifier: 74316740
GI number: 74316740
Start: 763663
End: 765690
Strand: Reverse
Name: fecA [H]
Synonym: Tbd_0722
Alternate gene names: 74316740
Gene position: 765690-763663 (Counterclockwise)
Preceding gene: 74316741
Following gene: 74316739
Centisome position: 26.31
GC content: 66.96
Gene sequence:
>2028_bases ATGAAGAAGAAGCTGTTGGCTGTACTGATTCCCCTGGCGTTTTCCGCGCACGCGCAGGAGACCGAGCAACTCGAGGCGGT GAGCGTGAGCGCCGACTGGCTCGGCGCCGCGACGCCGGAAGCGGCGAAGAAGCACCCCGGTGCACGCACCGTCGTCACCG AGCAGGAACTCGCCGAATCGGGCGCGCGCACCGTCGAAGACGCCTTGCGCACGGTGCCCGGCGTGCGCGTCCTCGACGAA AGCGGGACCGGCATCCTGCCCAACATCGGCGTGCGCGGCCTCAGCCCGCTGCGCAGCGAACAGGTGCTGGTGCTCGTCGA CGGCATGCCGATCACGCTCGCGCCCTACGGCCAGACCGGTTTGTCGCTGTTTCCGCTGACGCTCAATGCGGTCGAGGCGA TCGACGTGGCGCGCGGCGGCGTCGCGGTCCACTACGGCCCGAACAACGTCGGCGGCGTGATCAATTTCGTGACCAAGCGC ATCCCGCGCAAACCCGCTTTCACTGCGAAGGAGACGCTGTCGATCGCGAGCAGCGGCAATCTGCTCAGCGACACCTACCT GCGCGCGGGCGGCTTCGTCAGCGAGCGTCTGGGCCTGCAGGCCCAGGCCAATCTCATCGAAGGCGAAGCCGAGCGCGACC ATTCGAGCACCTCCGTGCAGAACCTCATGCTCGACGCCGACTGGTTCCTGACCGACAGCGCCAACCTCCGCGCCGGCCTG CAGTACTACAAGACCGAGAACGACATGCCCGGCGCGCTGACGCCGGCCTCGTACGAAGCCGACCGCGAGCAGTCGACCCG CCCGCTCGACCGCTTCGACGGCGACACGCTGCGCGGCCACGTCACCTACAGCCAGGCTTTCGCCAACGGCGCGGAATTGA GCTGGGCGAATTTCGCCCACCGCAGCAACCGGCAGTTCTTCTTCGGCAACTCGAGCAACGCCGACACGCCGTCGACCAAC GAGATGTCGTCGCCGCGCGAATTCTGGGTCTACGGCAGCGAGCCGCGGCTGACCTTCGACATCGACGCGGGCGTCAAGCA GAAGATCTCGCTCGGCGCGCGCTACCTGCGCGAGGAGGTCGACTACGTCGTCGACTCGCGCACGCTGGCGACCAATGCCT ACGCGGTCACGCGCGACTGGCGCTTCGAGAACGACGCCGTCGCCGCCTACCTGAGCGACACCTTCTTCCTGCTCGACGAC AGGCTCAAGGTCACGCCCGGCGTCCGCCACGAAACGGTCGACCTCTATTACCGCAATAACCTGACCGGCGCGGAAACGCG TGACACGACCAAGGACTGGCTGCCCGGCATCGACATCGGCTATCAGGCGAGCGACGCGGTCTTCCTGTTCGCGAACTATC ACAAGTCGCTGCGGCCGGTGCAGTTCACGCAGATCACCTTCGGCGGCGACCTCGACGCCGAGCGCGCGGAAAACTACGAA GCCGGCATCCGCGTCGCGCCGACCGCGAACGTCGATACGAGCCTGACCGCCTTCCGCTTCGACTTCGACAACAAGCTCGA ATTCGTCAGCCAGGCCGTCGGCTTCCGCAACCTCGGCGAGGCGCGCCATCAGGGCGTCGAGGCCGAAGTCGCGTGGCGCC CGGCCGCGGTGCGCGGGCTCGAACTCAAGACCGCCTACACCTACGTCGACACCGAGCAACGCTCGGGCCAGTTCGAGGGC AACGAACTGCCGCTCGCCCCGCACCACCAGCTCAACCTGCAGGGCAACTACCGCAGCGGCGACTGGAACTGGAACCTGAA CGGCCTCTACCAGAGCGCGTCCTTCTCCGACGGCGCGAACACGGTCGACGAGAACGCGACCGGCTCGGTCGGACGCATCC CGGCCTATTCGGTATGGAACGCGCAGGTCACGCGCGACTTCCGCTGGAACGGCACGAAGATGAAGGCCGCGCTCGCGCTC AACAACCTGTTCGATCGCGACTATTACTTCCGCGGCGTCGACTTCAGCCAGGGCCGCATGCCGGCGCCGGGCCGCGCCGC CTTGCTCACGCTACAGATGGACATGTGA
Upstream 100 bases:
>100_bases CTTCGCGGCCGCCGGGCCCGCCCACCCTATCGAGTAGAACCGCTACCACCCAGCCAGCCTTACAGCCAGCCAGAAATCCT TAACCGTATCTGGAGGCTGC
Downstream 100 bases:
>100_bases GGAGGGCGACCATGCGAGAGCTCATCCTGCTGGCCCACGTGCCGACCGATTCGGTCAACGACGGCTTCATTCCGGCAGCG CAGCGGCGCGGCCTGTCGGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MKKKLLAVLIPLAFSAHAQETEQLEAVSVSADWLGAATPEAAKKHPGARTVVTEQELAESGARTVEDALRTVPGVRVLDE SGTGILPNIGVRGLSPLRSEQVLVLVDGMPITLAPYGQTGLSLFPLTLNAVEAIDVARGGVAVHYGPNNVGGVINFVTKR IPRKPAFTAKETLSIASSGNLLSDTYLRAGGFVSERLGLQAQANLIEGEAERDHSSTSVQNLMLDADWFLTDSANLRAGL QYYKTENDMPGALTPASYEADREQSTRPLDRFDGDTLRGHVTYSQAFANGAELSWANFAHRSNRQFFFGNSSNADTPSTN EMSSPREFWVYGSEPRLTFDIDAGVKQKISLGARYLREEVDYVVDSRTLATNAYAVTRDWRFENDAVAAYLSDTFFLLDD RLKVTPGVRHETVDLYYRNNLTGAETRDTTKDWLPGIDIGYQASDAVFLFANYHKSLRPVQFTQITFGGDLDAERAENYE AGIRVAPTANVDTSLTAFRFDFDNKLEFVSQAVGFRNLGEARHQGVEAEVAWRPAAVRGLELKTAYTYVDTEQRSGQFEG NELPLAPHHQLNLQGNYRSGDWNWNLNGLYQSASFSDGANTVDENATGSVGRIPAYSVWNAQVTRDFRWNGTKMKAALAL NNLFDRDYYFRGVDFSQGRMPAPGRAALLTLQMDM
Sequences:
>Translated_675_residues MKKKLLAVLIPLAFSAHAQETEQLEAVSVSADWLGAATPEAAKKHPGARTVVTEQELAESGARTVEDALRTVPGVRVLDE SGTGILPNIGVRGLSPLRSEQVLVLVDGMPITLAPYGQTGLSLFPLTLNAVEAIDVARGGVAVHYGPNNVGGVINFVTKR IPRKPAFTAKETLSIASSGNLLSDTYLRAGGFVSERLGLQAQANLIEGEAERDHSSTSVQNLMLDADWFLTDSANLRAGL QYYKTENDMPGALTPASYEADREQSTRPLDRFDGDTLRGHVTYSQAFANGAELSWANFAHRSNRQFFFGNSSNADTPSTN EMSSPREFWVYGSEPRLTFDIDAGVKQKISLGARYLREEVDYVVDSRTLATNAYAVTRDWRFENDAVAAYLSDTFFLLDD RLKVTPGVRHETVDLYYRNNLTGAETRDTTKDWLPGIDIGYQASDAVFLFANYHKSLRPVQFTQITFGGDLDAERAENYE AGIRVAPTANVDTSLTAFRFDFDNKLEFVSQAVGFRNLGEARHQGVEAEVAWRPAAVRGLELKTAYTYVDTEQRSGQFEG NELPLAPHHQLNLQGNYRSGDWNWNLNGLYQSASFSDGANTVDENATGSVGRIPAYSVWNAQVTRDFRWNGTKMKAALAL NNLFDRDYYFRGVDFSQGRMPAPGRAALLTLQMDM >Mature_675_residues MKKKLLAVLIPLAFSAHAQETEQLEAVSVSADWLGAATPEAAKKHPGARTVVTEQELAESGARTVEDALRTVPGVRVLDE SGTGILPNIGVRGLSPLRSEQVLVLVDGMPITLAPYGQTGLSLFPLTLNAVEAIDVARGGVAVHYGPNNVGGVINFVTKR IPRKPAFTAKETLSIASSGNLLSDTYLRAGGFVSERLGLQAQANLIEGEAERDHSSTSVQNLMLDADWFLTDSANLRAGL QYYKTENDMPGALTPASYEADREQSTRPLDRFDGDTLRGHVTYSQAFANGAELSWANFAHRSNRQFFFGNSSNADTPSTN EMSSPREFWVYGSEPRLTFDIDAGVKQKISLGARYLREEVDYVVDSRTLATNAYAVTRDWRFENDAVAAYLSDTFFLLDD RLKVTPGVRHETVDLYYRNNLTGAETRDTTKDWLPGIDIGYQASDAVFLFANYHKSLRPVQFTQITFGGDLDAERAENYE AGIRVAPTANVDTSLTAFRFDFDNKLEFVSQAVGFRNLGEARHQGVEAEVAWRPAAVRGLELKTAYTYVDTEQRSGQFEG NELPLAPHHQLNLQGNYRSGDWNWNLNGLYQSASFSDGANTVDENATGSVGRIPAYSVWNAQVTRDFRWNGTKMKAALAL NNLFDRDYYFRGVDFSQGRMPAPGRAALLTLQMDM
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=656, Percent_Identity=34.7560975609756, Blast_Score=343, Evalue=3e-95, Organism=Escherichia coli, GI1788478, Length=703, Percent_Identity=22.0483641536273, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790405, Length=160, Percent_Identity=35.625, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1786798, Length=175, Percent_Identity=30.2857142857143, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 74419; Mature: 74419
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLLAVLIPLAFSAHAQETEQLEAVSVSADWLGAATPEAAKKHPGARTVVTEQELAES CCCHHEEHHHHHHHCCCCCHHHHEEEEEECCHHCCCCCCHHHHHCCCCCEEEEHHHHHHC GARTVEDALRTVPGVRVLDESGTGILPNIGVRGLSPLRSEQVLVLVDGMPITLAPYGQTG CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC LSLFPLTLNAVEAIDVARGGVAVHYGPNNVGGVINFVTKRIPRKPAFTAKETLSIASSGN CEEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHEEECCCCC LLSDTYLRAGGFVSERLGLQAQANLIEGEAERDHSSTSVQNLMLDADWFLTDSANLRAGL CCHHHHHHCCCCHHHHCCCEEECCEECCCCCCCCCHHHHHHEEEECCEEEECCCCHHHCC QYYKTENDMPGALTPASYEADREQSTRPLDRFDGDTLRGHVTYSQAFANGAELSWANFAH CEEECCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCEEEEEEEHHHHCCCCCCCHHHHHH RSNRQFFFGNSSNADTPSTNEMSSPREFWVYGSEPRLTFDIDAGVKQKISLGARYLREEV CCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH DYVVDSRTLATNAYAVTRDWRFENDAVAAYLSDTFFLLDDRLKVTPGVRHETVDLYYRNN HHHHCCCEEECCEEEEEECCCCCCCEEEEEECCEEEEEECCEEECCCCCEEEEEEEEECC LTGAETRDTTKDWLPGIDIGYQASDAVFLFANYHKSLRPVQFTQITFGGDLDAERAENYE CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHCCCC AGIRVAPTANVDTSLTAFRFDFDNKLEFVSQAVGFRNLGEARHQGVEAEVAWRPAAVRGL CCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHHCCCCEEEEECCHHCCCE ELKTAYTYVDTEQRSGQFEGNELPLAPHHQLNLQGNYRSGDWNWNLNGLYQSASFSDGAN EEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCC TVDENATGSVGRIPAYSVWNAQVTRDFRWNGTKMKAALALNNLFDRDYYFRGVDFSQGRM CCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCCEEECCCCCCCCC PAPGRAALLTLQMDM CCCCCEEEEEEEECC >Mature Secondary Structure MKKKLLAVLIPLAFSAHAQETEQLEAVSVSADWLGAATPEAAKKHPGARTVVTEQELAES CCCHHEEHHHHHHHCCCCCHHHHEEEEEECCHHCCCCCCHHHHHCCCCCEEEEHHHHHHC GARTVEDALRTVPGVRVLDESGTGILPNIGVRGLSPLRSEQVLVLVDGMPITLAPYGQTG CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC LSLFPLTLNAVEAIDVARGGVAVHYGPNNVGGVINFVTKRIPRKPAFTAKETLSIASSGN CEEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHEEECCCCC LLSDTYLRAGGFVSERLGLQAQANLIEGEAERDHSSTSVQNLMLDADWFLTDSANLRAGL CCHHHHHHCCCCHHHHCCCEEECCEECCCCCCCCCHHHHHHEEEECCEEEECCCCHHHCC QYYKTENDMPGALTPASYEADREQSTRPLDRFDGDTLRGHVTYSQAFANGAELSWANFAH CEEECCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCEEEEEEEHHHHCCCCCCCHHHHHH RSNRQFFFGNSSNADTPSTNEMSSPREFWVYGSEPRLTFDIDAGVKQKISLGARYLREEV CCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH DYVVDSRTLATNAYAVTRDWRFENDAVAAYLSDTFFLLDDRLKVTPGVRHETVDLYYRNN HHHHCCCEEECCEEEEEECCCCCCCEEEEEECCEEEEEECCEEECCCCCEEEEEEEEECC LTGAETRDTTKDWLPGIDIGYQASDAVFLFANYHKSLRPVQFTQITFGGDLDAERAENYE CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHCCCC AGIRVAPTANVDTSLTAFRFDFDNKLEFVSQAVGFRNLGEARHQGVEAEVAWRPAAVRGL CCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHHCCCCEEEEECCHHCCCE ELKTAYTYVDTEQRSGQFEGNELPLAPHHQLNLQGNYRSGDWNWNLNGLYQSASFSDGAN EEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCC TVDENATGSVGRIPAYSVWNAQVTRDFRWNGTKMKAALALNNLFDRDYYFRGVDFSQGRM CCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCCEEECCCCCCCCC PAPGRAALLTLQMDM CCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]