The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is fatA [H]

Identifier: 74316733

GI number: 74316733

Start: 753230

End: 755326

Strand: Reverse

Name: fatA [H]

Synonym: Tbd_0715

Alternate gene names: 74316733

Gene position: 755326-753230 (Counterclockwise)

Preceding gene: 74316734

Following gene: 74316732

Centisome position: 25.96

GC content: 66.48

Gene sequence:

>2097_bases
ATGAAATTCCGTCTCTCCGCGCTGGCAGGCGCGCTTTCGCTCGCGTTCTCGGCGTCACCGGTCAACGCCCAGACTCCGCA
GGAAAACCCGCCCGGCGAACTCGACACGGTCACCGTCTGGTCGGAATACGCGGGCAGCTTCAAGTCCGACACGGTCCAGG
TCGGCACCTTCCGCGAGGCGTCGCCGCTCGACGTGCCGCAGACCAGCAACGTCGTGACGCGCGAAGTGCTCGACGCGCAG
GCCGCGTCGACGCTGTTCGGCGCCTTGCGCAACACCGCGGGGGTCACCCGCTCGCAACTCAACGGCTCGACCTACGACAA
CATCGCGATCCGCGGCATCCTGGTCGAGAACCGCGGCAACTACCGGCTCAACGGCTCCTTGCCGATCATCAACCTGATCG
ATGTGCCGCTCGAAAACAAGGAGCGCGTCGAAGTGCTCAAGGGCGCCTCGTCGCTCTACTACGGCTTCGTGCCGCCGTCG
GGCATCGTGAACCTCGTCACCAAGCGCGCGGGCAAGGACCCGGTGTCGAGCCTGGCGCTGTCGGCCAACCACTACGGCGG
CGCCAATGTGCACGCCGACGTCGGCCGGCGCTTCGGTGAAGAGCAGCAGTTCGGCGCACGCGTCAATCTGCTTGCCGGCC
GCGAGGATATCGGCGTCGACAACTACTCTGGCGACCGCTCCCTCGGCGCGGTCGCGTTCGACTGGCAGGCCAGCGACGCG
CTGTCGTTCAAGCTCGACGTCGAGCACTACCGCAAGGACGTTTCCGAGCAAGCGGCGATCAAAGTGCTGGCCCCGAACGC
AGACGGGACGATCACGCTGCCCGCCATTCCGGACGCCCGGACCAATCTTGCGGGCGAATGGCAGACCTACGACGCCGACG
CGACCAACGTGCTCTTCCGTACCGACTACGTGCTGAGCGACGACTGGGGTTTGCTGCTCGAAGCCGGCCACGCGCAGACC
AACCGCGACCGACGCTTCTCCCAGTTCGAGAACTACAACCTCGCGACCGGGGACGGCACGCTGAAAATCTTCTTCAGCCC
GAACCAGGAATACGAGAACAGCAACTACCGCGCCGAGAGCTTCGGTCACATCCCCGGCACCTGGGTCAGCCACGACCTCT
CGTTCGGCTACACCGCGAACCAGCGCGACCAGAATTCCCGTTCCGGCGGCAGCGTCAGCGTCGCGCAGAACCTCTACGAC
CCGACCGAGGTGCCGGAACAGACCGCCCCCTCGGCCCCGAGCCACAACCCGTCCACGATCGAGGATCGCGGCTGGTATCT
GTTCGACCGCATGTCTTTCGGCGAAAAGTGGCAACTCATGCTCGGCGCGCGCGCCAGCCGTTATGTGAGCGAAACGACGA
GCACGCGCTACGAGGCGGACGACGTCAATCCGTCCGTCGCGATCATGTACAAGCCGGTCGCCGGCGTGTCGGTCTATGGC
AGCTATCTCGAGGGCCTCGAGGAAAGCGGCCAGGCGCCGGCCCACCGCGCCAACGCCGGCGAGCTGCTGCCGCCTGCGCT
GTCGAAGCAGAAGGAAATCGGCGTCAAGGCCGAGGTAGCGCAAGGCGTCCTGCTGCAGGCCGCGTATTTCGACATCGAGC
GCCCCTCGACGACGGTCGACGCGTCCAACCGCTTCGTCCTCAACGGCCTCGCCCAGTACCGCGGCATCGAACTCGCGGCC
AGCGGCGAAGTCACGCGCTACCTGGCGCTGATCGGGTCCGCCCTCTTTCTCGACGCCGAGCAGCAGAACGCAGCCAACCC
GGCGACCTTCGGCAAGGTGCCGGACAATACGCCCGAGCGCACGGCGAGCCTGTTCGCGGAATACCGGCTGCCCGCTGTGC
CGGGGCTCGCGCTGAGCGGCGGCCTCTACTACGTCGGCAAGCGCCCGGTGGACAACGAAAACCGCGCCTTCGTCGACGGC
TACACGACGCTTTCGCTCGGCGCCCGCCACAGCACGAAGCTGAATGGCAAGCGCACGACCTTCCAGGCCGTCGTCGACAA
TGTGACCAACGAAAGCTACTGGAGCACGGCGGGCAACGGCCTGCTCGGCGTCGGCGCGCCGCGCACGCTGAAGCTGACGG
CAAAGGTCGAGTTCTGA

Upstream 100 bases:

>100_bases
TCACGCCAGCCACTGACCCCTCCCGGCACGGAGGTGGGTCGCAGCCAGCAGCTTGCTTTGCGGCGACTTCCATCCTTCCA
ACGAGAAAAAGGTCAGATCC

Downstream 100 bases:

>100_bases
TCGCCACAGCAGGCCGCGTGTCGAACGCCGGGGCAAGGGAAGCCGCAGCGATGACGGCACGCCGCCTCGTCGTCAAGCTC
CACCTCTATACGGGGCTCTT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: OM2 [H]

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKFRLSALAGALSLAFSASPVNAQTPQENPPGELDTVTVWSEYAGSFKSDTVQVGTFREASPLDVPQTSNVVTREVLDAQ
AASTLFGALRNTAGVTRSQLNGSTYDNIAIRGILVENRGNYRLNGSLPIINLIDVPLENKERVEVLKGASSLYYGFVPPS
GIVNLVTKRAGKDPVSSLALSANHYGGANVHADVGRRFGEEQQFGARVNLLAGREDIGVDNYSGDRSLGAVAFDWQASDA
LSFKLDVEHYRKDVSEQAAIKVLAPNADGTITLPAIPDARTNLAGEWQTYDADATNVLFRTDYVLSDDWGLLLEAGHAQT
NRDRRFSQFENYNLATGDGTLKIFFSPNQEYENSNYRAESFGHIPGTWVSHDLSFGYTANQRDQNSRSGGSVSVAQNLYD
PTEVPEQTAPSAPSHNPSTIEDRGWYLFDRMSFGEKWQLMLGARASRYVSETTSTRYEADDVNPSVAIMYKPVAGVSVYG
SYLEGLEESGQAPAHRANAGELLPPALSKQKEIGVKAEVAQGVLLQAAYFDIERPSTTVDASNRFVLNGLAQYRGIELAA
SGEVTRYLALIGSALFLDAEQQNAANPATFGKVPDNTPERTASLFAEYRLPAVPGLALSGGLYYVGKRPVDNENRAFVDG
YTTLSLGARHSTKLNGKRTTFQAVVDNVTNESYWSTAGNGLLGVGAPRTLKLTAKVEF

Sequences:

>Translated_698_residues
MKFRLSALAGALSLAFSASPVNAQTPQENPPGELDTVTVWSEYAGSFKSDTVQVGTFREASPLDVPQTSNVVTREVLDAQ
AASTLFGALRNTAGVTRSQLNGSTYDNIAIRGILVENRGNYRLNGSLPIINLIDVPLENKERVEVLKGASSLYYGFVPPS
GIVNLVTKRAGKDPVSSLALSANHYGGANVHADVGRRFGEEQQFGARVNLLAGREDIGVDNYSGDRSLGAVAFDWQASDA
LSFKLDVEHYRKDVSEQAAIKVLAPNADGTITLPAIPDARTNLAGEWQTYDADATNVLFRTDYVLSDDWGLLLEAGHAQT
NRDRRFSQFENYNLATGDGTLKIFFSPNQEYENSNYRAESFGHIPGTWVSHDLSFGYTANQRDQNSRSGGSVSVAQNLYD
PTEVPEQTAPSAPSHNPSTIEDRGWYLFDRMSFGEKWQLMLGARASRYVSETTSTRYEADDVNPSVAIMYKPVAGVSVYG
SYLEGLEESGQAPAHRANAGELLPPALSKQKEIGVKAEVAQGVLLQAAYFDIERPSTTVDASNRFVLNGLAQYRGIELAA
SGEVTRYLALIGSALFLDAEQQNAANPATFGKVPDNTPERTASLFAEYRLPAVPGLALSGGLYYVGKRPVDNENRAFVDG
YTTLSLGARHSTKLNGKRTTFQAVVDNVTNESYWSTAGNGLLGVGAPRTLKLTAKVEF
>Mature_698_residues
MKFRLSALAGALSLAFSASPVNAQTPQENPPGELDTVTVWSEYAGSFKSDTVQVGTFREASPLDVPQTSNVVTREVLDAQ
AASTLFGALRNTAGVTRSQLNGSTYDNIAIRGILVENRGNYRLNGSLPIINLIDVPLENKERVEVLKGASSLYYGFVPPS
GIVNLVTKRAGKDPVSSLALSANHYGGANVHADVGRRFGEEQQFGARVNLLAGREDIGVDNYSGDRSLGAVAFDWQASDA
LSFKLDVEHYRKDVSEQAAIKVLAPNADGTITLPAIPDARTNLAGEWQTYDADATNVLFRTDYVLSDDWGLLLEAGHAQT
NRDRRFSQFENYNLATGDGTLKIFFSPNQEYENSNYRAESFGHIPGTWVSHDLSFGYTANQRDQNSRSGGSVSVAQNLYD
PTEVPEQTAPSAPSHNPSTIEDRGWYLFDRMSFGEKWQLMLGARASRYVSETTSTRYEADDVNPSVAIMYKPVAGVSVYG
SYLEGLEESGQAPAHRANAGELLPPALSKQKEIGVKAEVAQGVLLQAAYFDIERPSTTVDASNRFVLNGLAQYRGIELAA
SGEVTRYLALIGSALFLDAEQQNAANPATFGKVPDNTPERTASLFAEYRLPAVPGLALSGGLYYVGKRPVDNENRAFVDG
YTTLSLGARHSTKLNGKRTTFQAVVDNVTNESYWSTAGNGLLGVGAPRTLKLTAKVEF

Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=754, Percent_Identity=23.7400530503979, Blast_Score=125, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 75569; Mature: 75569

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRLSALAGALSLAFSASPVNAQTPQENPPGELDTVTVWSEYAGSFKSDTVQVGTFREA
CCEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCC
SPLDVPQTSNVVTREVLDAQAASTLFGALRNTAGVTRSQLNGSTYDNIAIRGILVENRGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEECCCC
YRLNGSLPIINLIDVPLENKERVEVLKGASSLYYGFVPPSGIVNLVTKRAGKDPVSSLAL
EEECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHEE
SANHYGGANVHADVGRRFGEEQQFGARVNLLAGREDIGVDNYSGDRSLGAVAFDWQASDA
ECCCCCCCCEEHHHHHHCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
LSFKLDVEHYRKDVSEQAAIKVLAPNADGTITLPAIPDARTNLAGEWQTYDADATNVLFR
EEEEEEHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEE
TDYVLSDDWGLLLEAGHAQTNRDRRFSQFENYNLATGDGTLKIFFSPNQEYENSNYRAES
ECEEEECCCCEEEECCCCCCCCCHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCHHH
FGHIPGTWVSHDLSFGYTANQRDQNSRSGGSVSVAQNLYDPTEVPEQTAPSAPSHNPSTI
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHCCCCCCCCCCCCC
EDRGWYLFDRMSFGEKWQLMLGARASRYVSETTSTRYEADDVNPSVAIMYKPVAGVSVYG
CCCCEEEEEECCCCCCEEEEECCHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCHHHHH
SYLEGLEESGQAPAHRANAGELLPPALSKQKEIGVKAEVAQGVLLQAAYFDIERPSTTVD
HHHHHHHHCCCCCCCCCCCCCCCCCHHCHHHHCCCHHHHHCCCEEEEEEEECCCCCCEEC
ASNRFVLNGLAQYRGIELAASGEVTRYLALIGSALFLDAEQQNAANPATFGKVPDNTPER
CCCCEEEECHHHHCCEEEEECCCHHHHHHHHHHHHEEECHHCCCCCCCCCCCCCCCCHHH
TASLFAEYRLPAVPGLALSGGLYYVGKRPVDNENRAFVDGYTTLSLGARHSTKLNGKRTT
HHHHHHHHCCCCCCCEEECCCEEEECCCCCCCCCCEEEECEEEEEECCCCCCCCCCCHHH
FQAVVDNVTNESYWSTAGNGLLGVGAPRTLKLTAKVEF
HHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKFRLSALAGALSLAFSASPVNAQTPQENPPGELDTVTVWSEYAGSFKSDTVQVGTFREA
CCEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCC
SPLDVPQTSNVVTREVLDAQAASTLFGALRNTAGVTRSQLNGSTYDNIAIRGILVENRGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEECCCC
YRLNGSLPIINLIDVPLENKERVEVLKGASSLYYGFVPPSGIVNLVTKRAGKDPVSSLAL
EEECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHEE
SANHYGGANVHADVGRRFGEEQQFGARVNLLAGREDIGVDNYSGDRSLGAVAFDWQASDA
ECCCCCCCCEEHHHHHHCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
LSFKLDVEHYRKDVSEQAAIKVLAPNADGTITLPAIPDARTNLAGEWQTYDADATNVLFR
EEEEEEHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEE
TDYVLSDDWGLLLEAGHAQTNRDRRFSQFENYNLATGDGTLKIFFSPNQEYENSNYRAES
ECEEEECCCCEEEECCCCCCCCCHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCHHH
FGHIPGTWVSHDLSFGYTANQRDQNSRSGGSVSVAQNLYDPTEVPEQTAPSAPSHNPSTI
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHCCCCCCCCCCCCC
EDRGWYLFDRMSFGEKWQLMLGARASRYVSETTSTRYEADDVNPSVAIMYKPVAGVSVYG
CCCCEEEEEECCCCCCEEEEECCHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCHHHHH
SYLEGLEESGQAPAHRANAGELLPPALSKQKEIGVKAEVAQGVLLQAAYFDIERPSTTVD
HHHHHHHHCCCCCCCCCCCCCCCCCHHCHHHHCCCHHHHHCCCEEEEEEEECCCCCCEEC
ASNRFVLNGLAQYRGIELAASGEVTRYLALIGSALFLDAEQQNAANPATFGKVPDNTPER
CCCCEEEECHHHHCCEEEEECCCHHHHHHHHHHHHEEECHHCCCCCCCCCCCCCCCCHHH
TASLFAEYRLPAVPGLALSGGLYYVGKRPVDNENRAFVDGYTTLSLGARHSTKLNGKRTT
HHHHHHHHCCCCCCCEEECCCEEEECCCCCCCCCCEEEECEEEEEECCCCCCCCCCCHHH
FQAVVDNVTNESYWSTAGNGLLGVGAPRTLKLTAKVEF
HHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2830268; 13129954; 2311935 [H]