| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316732
Identifier: 74316732
GI number: 74316732
Start: 752091
End: 753179
Strand: Reverse
Name: 74316732
Synonym: Tbd_0714
Alternate gene names: NA
Gene position: 753179-752091 (Counterclockwise)
Preceding gene: 74316733
Following gene: 74316731
Centisome position: 25.88
GC content: 69.79
Gene sequence:
>1089_bases ATGACGGCACGCCGCCTCGTCGTCAAGCTCCACCTCTATACGGGGCTCTTCGTCGGCCTGCTGCTGGCGGTGACGGGGCT GAGCGGCAGCGTGCTCGTATTCCGCGAGGAGCTCGAAGCGCTCGCCCATCAGCATCTGCTCGTTTCCGACGGGTCAGGCG AGCGCGTTGCGGTGGCAGACGTGGTGGCGGCCGTGCAGCGCGCCTACCCGGCCGACAAGCCCTTCGCGATCCGCGTGCCG CGCGCGCCGCAGGAGACCTATCTCGTCAAGCTCAATAACGCACACGACCGCTTCGTCTATGTGGATCCCTACGACGGCAG CATCCTCGGCACGCATCGCCAGCGCGAGACCGTGCTCGGATGGCTTGCACTGCTGCACACCGAACTGCTGGCCGGCGAGG CGGGCGAGACCGTGGTCGGAGTCGGCGGGCTGCTGCTGCTCGGCCTGGGCGCGACGGGGGTCGTCCTCTGGTGGCCGCGA AACGGAAAACTTTCGCAGGGCTTCAAGATGCAGTGGTCGGCGCACTGGAAGCGGCTGAATTTCGACCTCCACCGCGCGAC CGGCATCTACGCGGTGCTGTTCCTCTCGATCACGGCTGCGACCGGCGCCGCCTTCGTGTTCAACGCAAGCGCGATCGATC TCGTCGACGCACTGACCGCGAGCGCGCCGCGGCCGCCGGCACCGCGCCTCCCGCCCGATCGCCCGGGCGCGCCTGCGCCG ACGCTCGACGCGCTGCTGCAAGCGGCCGACCGCGCGCTGCCCTTGCCGACCACCTGGGTCAGCCTGCCGCAAACCGCGAG CGCGCCGCTCGTCGTGCGCAAGAAACGGCCGGACGAGCCGCACCCGAACGGACGCAACTTCGTCTTTCTCGATCCGCGTT CCGGCGCGGTGCTGCAGCTCGAACGCGACCTGTTGGCGCCGCGCGGCACGCGCGTCTTCAATACCCTTTATCCGCTGCAC GTCGGGGCGATCGCGGGGACGCCGACCCGCATCCTGCAAGCAGCGGTCGGCCTCGCGCCGCTCGTCCTCATGGTGACAGG GTTGGCGATGTGGGCGAACCGCCGCCGGCGCAAGCGCCCACCTCGGTAA
Upstream 100 bases:
>100_bases GCGTCGGCGCGCCGCGCACGCTGAAGCTGACGGCAAAGGTCGAGTTCTGATCGCCACAGCAGGCCGCGTGTCGAACGCCG GGGCAAGGGAAGCCGCAGCG
Downstream 100 bases:
>100_bases GCGTCCTCCCACGCTAATCCATGCGCCCACCATTGACTACAGTAATGCGAACCATTATTATTCGCGTTGCTTGAGATCGT CCGCGGAATCCTTTGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTARRLVVKLHLYTGLFVGLLLAVTGLSGSVLVFREELEALAHQHLLVSDGSGERVAVADVVAAVQRAYPADKPFAIRVP RAPQETYLVKLNNAHDRFVYVDPYDGSILGTHRQRETVLGWLALLHTELLAGEAGETVVGVGGLLLLGLGATGVVLWWPR NGKLSQGFKMQWSAHWKRLNFDLHRATGIYAVLFLSITAATGAAFVFNASAIDLVDALTASAPRPPAPRLPPDRPGAPAP TLDALLQAADRALPLPTTWVSLPQTASAPLVVRKKRPDEPHPNGRNFVFLDPRSGAVLQLERDLLAPRGTRVFNTLYPLH VGAIAGTPTRILQAAVGLAPLVLMVTGLAMWANRRRRKRPPR
Sequences:
>Translated_362_residues MTARRLVVKLHLYTGLFVGLLLAVTGLSGSVLVFREELEALAHQHLLVSDGSGERVAVADVVAAVQRAYPADKPFAIRVP RAPQETYLVKLNNAHDRFVYVDPYDGSILGTHRQRETVLGWLALLHTELLAGEAGETVVGVGGLLLLGLGATGVVLWWPR NGKLSQGFKMQWSAHWKRLNFDLHRATGIYAVLFLSITAATGAAFVFNASAIDLVDALTASAPRPPAPRLPPDRPGAPAP TLDALLQAADRALPLPTTWVSLPQTASAPLVVRKKRPDEPHPNGRNFVFLDPRSGAVLQLERDLLAPRGTRVFNTLYPLH VGAIAGTPTRILQAAVGLAPLVLMVTGLAMWANRRRRKRPPR >Mature_361_residues TARRLVVKLHLYTGLFVGLLLAVTGLSGSVLVFREELEALAHQHLLVSDGSGERVAVADVVAAVQRAYPADKPFAIRVPR APQETYLVKLNNAHDRFVYVDPYDGSILGTHRQRETVLGWLALLHTELLAGEAGETVVGVGGLLLLGLGATGVVLWWPRN GKLSQGFKMQWSAHWKRLNFDLHRATGIYAVLFLSITAATGAAFVFNASAIDLVDALTASAPRPPAPRLPPDRPGAPAPT LDALLQAADRALPLPTTWVSLPQTASAPLVVRKKRPDEPHPNGRNFVFLDPRSGAVLQLERDLLAPRGTRVFNTLYPLHV GAIAGTPTRILQAAVGLAPLVLMVTGLAMWANRRRRKRPPR
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39230; Mature: 39099
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARRLVVKLHLYTGLFVGLLLAVTGLSGSVLVFREELEALAHQHLLVSDGSGERVAVAD CCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCEEEEECCCCCEEHHHH VVAAVQRAYPADKPFAIRVPRAPQETYLVKLNNAHDRFVYVDPYDGSILGTHRQRETVLG HHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEECCCHHHHHHHH WLALLHTELLAGEAGETVVGVGGLLLLGLGATGVVLWWPRNGKLSQGFKMQWSAHWKRLN HHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHCC FDLHRATGIYAVLFLSITAATGAAFVFNASAIDLVDALTASAPRPPAPRLPPDRPGAPAP CCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH TLDALLQAADRALPLPTTWVSLPQTASAPLVVRKKRPDEPHPNGRNFVFLDPRSGAVLQL HHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEE ERDLLAPRGTRVFNTLYPLHVGAIAGTPTRILQAAVGLAPLVLMVTGLAMWANRRRRKRP EHHHCCCCCCHHHHHHHHHHECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PR CC >Mature Secondary Structure TARRLVVKLHLYTGLFVGLLLAVTGLSGSVLVFREELEALAHQHLLVSDGSGERVAVAD CCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCEEEEECCCCCEEHHHH VVAAVQRAYPADKPFAIRVPRAPQETYLVKLNNAHDRFVYVDPYDGSILGTHRQRETVLG HHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEECCCHHHHHHHH WLALLHTELLAGEAGETVVGVGGLLLLGLGATGVVLWWPRNGKLSQGFKMQWSAHWKRLN HHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHCC FDLHRATGIYAVLFLSITAATGAAFVFNASAIDLVDALTASAPRPPAPRLPPDRPGAPAP CCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH TLDALLQAADRALPLPTTWVSLPQTASAPLVVRKKRPDEPHPNGRNFVFLDPRSGAVLQL HHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEE ERDLLAPRGTRVFNTLYPLHVGAIAGTPTRILQAAVGLAPLVLMVTGLAMWANRRRRKRP EHHHCCCCCCHHHHHHHHHHECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA