| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316725
Identifier: 74316725
GI number: 74316725
Start: 747096
End: 747569
Strand: Reverse
Name: 74316725
Synonym: Tbd_0707
Alternate gene names: NA
Gene position: 747569-747096 (Counterclockwise)
Preceding gene: 74316726
Following gene: 74316724
Centisome position: 25.69
GC content: 68.78
Gene sequence:
>474_bases GTGAGCGCACTGACCATTCGTCTCGGTGCGCGCCACAGGCGGCTCACTTACGCGACCTTCGCCCTGCTCTGGACGAGCGG CGCGCTGTGGCTGGCGTTCCATTACTTTTTGCGCGTCGAAGGCGACTTCGGCCCCGAAGCGCATCCGCTCGAAGTCTGGT GGCTCCGCCTGCACGGGCTGACGGCGATGCTCGCGCTGGTTGCCGTCGGTTCGCTTGCGACCAATCACGTGCGGCTCGCG TGGAAGCGCGGCAAGAACCTCGGCACCGGCCTGCCGATGCTCGCGATGACGGCGTGGCTCGCCGTGAGCGGCTACGCGCT TTATTACTTCGCGTCCGAGGCCAACGAGGCGTGGCTGCCGCTCACGCACTGGATCGCCGGTCTCGCCGTGCCGCTCGCGG GGCTCGTTCACGTGCGCCAGGGGCGACGCCCGCCCGCGCACGCGATGCATCGCAAACCGGCACGTTCCACCTGA
Upstream 100 bases:
>100_bases TGCTCGCGCGCCATGGCGCGCAGGCCATCGTGCTCGACGGCCAACGCGCGATATGCAGCGATGCCGACGGCTGGCACGAC CTGCCCGCGGGAGGCACGGC
Downstream 100 bases:
>100_bases TTTTTTTACCCGCCAGCCAGGGCGATCGCCCCAAGCCAGCTCTTTCTCAACTGCAACAAGGGGAGTAGTAAATGAAGTAC GAATTGAAACGCACCACACT
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSALTIRLGARHRRLTYATFALLWTSGALWLAFHYFLRVEGDFGPEAHPLEVWWLRLHGLTAMLALVAVGSLATNHVRLA WKRGKNLGTGLPMLAMTAWLAVSGYALYYFASEANEAWLPLTHWIAGLAVPLAGLVHVRQGRRPPAHAMHRKPARST
Sequences:
>Translated_157_residues MSALTIRLGARHRRLTYATFALLWTSGALWLAFHYFLRVEGDFGPEAHPLEVWWLRLHGLTAMLALVAVGSLATNHVRLA WKRGKNLGTGLPMLAMTAWLAVSGYALYYFASEANEAWLPLTHWIAGLAVPLAGLVHVRQGRRPPAHAMHRKPARST >Mature_156_residues SALTIRLGARHRRLTYATFALLWTSGALWLAFHYFLRVEGDFGPEAHPLEVWWLRLHGLTAMLALVAVGSLATNHVRLAW KRGKNLGTGLPMLAMTAWLAVSGYALYYFASEANEAWLPLTHWIAGLAVPLAGLVHVRQGRRPPAHAMHRKPARST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17486; Mature: 17355
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALTIRLGARHRRLTYATFALLWTSGALWLAFHYFLRVEGDFGPEAHPLEVWWLRLHGL CCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH TAMLALVAVGSLATNHVRLAWKRGKNLGTGLPMLAMTAWLAVSGYALYYFASEANEAWLP HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCC LTHWIAGLAVPLAGLVHVRQGRRPPAHAMHRKPARST HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC >Mature Secondary Structure SALTIRLGARHRRLTYATFALLWTSGALWLAFHYFLRVEGDFGPEAHPLEVWWLRLHGL CEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH TAMLALVAVGSLATNHVRLAWKRGKNLGTGLPMLAMTAWLAVSGYALYYFASEANEAWLP HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCC LTHWIAGLAVPLAGLVHVRQGRRPPAHAMHRKPARST HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA