| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316724
Identifier: 74316724
GI number: 74316724
Start: 745801
End: 747024
Strand: Reverse
Name: 74316724
Synonym: Tbd_0706
Alternate gene names: NA
Gene position: 747024-745801 (Counterclockwise)
Preceding gene: 74316725
Following gene: 74316723
Centisome position: 25.67
GC content: 64.3
Gene sequence:
>1224_bases ATGAAGTACGAATTGAAACGCACCACACTCGCTGCGGCGCTTCTGTCGGCCCTGGCCGCACCTGCATGGGCCGACATGAG CGTCGAAGAGCGCCTGAAGGCGATGGAAAGCCGCCTGAACGCGCTCGAAGCCGAGAACCAGGCGCTCAAGGGCCAGCTGC AGAGCACCGAGCAGAAGGTCACGGCGACCACGGCGCAAATCGAGGAAGTGTCGCGCACGGCTTCCACCGGCGGCGCGAGC TGGGCCGAGAACACGCGCATCGGCGGCTATGGCGAACTGCACTACAACAACCTCGACGGCGAAGGTGGTGCATCGGACAA GGAAGAATTCGACTTGCATCGCTTCGTGCTGTTCTTCGGCCACACCTTCAACGAACGCACGCGTTTCTTCTCAGAGGTCG AGGTCGAGCACAGCATCGCCGGCGAGGGCAAGAACGGTGAGATCGAGCTCGAGCAGGCCTACGTCGAATACGACCTCACG CCCAATCACCGCGTCAAGGGCGGCCTCTTCCTGCTTCCGGTCGGCCTGATCAACGAAACGCACGAGCCGCCGACCTTCTA CGGCGTCGAGCGCAACCCGGTCGAGAGCAACATCATTCCGGCGACCTGGTGGGCCGGCGGCGCCGCAATCGCGGGCGACC TCGGCGCCGGCTTCGGCTACGACTTCGCGGTCCACGAGGGCCTGGGGACGACCGCGGCGAAGAGCTACAAACCGCGCGAC GGCCGCCAGAAGACGAGCAATGCCAAGGCCAACGACCTCGCCTATACCGCGCGCCTGAAGTGGACCGGCATGCCCGGACT CGAACTGGGCGGCTCGCTGCAATACCAGAGCGACATGACCCAAAGCCTCGACGCCAACGCCGGCAGCGCGACGCTGGCCG AAGTGCACGGCGTCTTCACCAAGGGCCCGTTCGGCCTCAAGGCGCTGTATTCGCAGTGGAATCTCGACGGCAGCGGACCC GAGGCGATCGGCGCCGACAAGCAGCTCGGCTGGTACATCGAGCCCTCGTTCAAGCTGTCCGAACAGTGGGGCGTCTTCGC CCGCTACAACCTGTGGGACAACACCGCAGGCGACAGCGCCGACAGCGAAAAGAAACAGATCGACGCCGGCGTGAACTTCT GGCCGCATCCCGACGTGGTGGTCAAGGCCGACTACCAGCATCAGGACAACGACAACGGCCAGAACCAGAATGGTTTCAAC CTCGGCGTCGGCTACCAGTTCTGA
Upstream 100 bases:
>100_bases TGCATCGCAAACCGGCACGTTCCACCTGATTTTTTTACCCGCCAGCCAGGGCGATCGCCCCAAGCCAGCTCTTTCTCAAC TGCAACAAGGGGAGTAGTAA
Downstream 100 bases:
>100_bases CGCTTCCCCATCGGCGGGTCGTGATCCACGGCCGCCGTCTACGCCCGCCACACCTCGCTGAGGTCCGGCGGGTTTTTTTC GCCTTACGAGCCGGCAAATG
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKYELKRTTLAAALLSALAAPAWADMSVEERLKAMESRLNALEAENQALKGQLQSTEQKVTATTAQIEEVSRTASTGGAS WAENTRIGGYGELHYNNLDGEGGASDKEEFDLHRFVLFFGHTFNERTRFFSEVEVEHSIAGEGKNGEIELEQAYVEYDLT PNHRVKGGLFLLPVGLINETHEPPTFYGVERNPVESNIIPATWWAGGAAIAGDLGAGFGYDFAVHEGLGTTAAKSYKPRD GRQKTSNAKANDLAYTARLKWTGMPGLELGGSLQYQSDMTQSLDANAGSATLAEVHGVFTKGPFGLKALYSQWNLDGSGP EAIGADKQLGWYIEPSFKLSEQWGVFARYNLWDNTAGDSADSEKKQIDAGVNFWPHPDVVVKADYQHQDNDNGQNQNGFN LGVGYQF
Sequences:
>Translated_407_residues MKYELKRTTLAAALLSALAAPAWADMSVEERLKAMESRLNALEAENQALKGQLQSTEQKVTATTAQIEEVSRTASTGGAS WAENTRIGGYGELHYNNLDGEGGASDKEEFDLHRFVLFFGHTFNERTRFFSEVEVEHSIAGEGKNGEIELEQAYVEYDLT PNHRVKGGLFLLPVGLINETHEPPTFYGVERNPVESNIIPATWWAGGAAIAGDLGAGFGYDFAVHEGLGTTAAKSYKPRD GRQKTSNAKANDLAYTARLKWTGMPGLELGGSLQYQSDMTQSLDANAGSATLAEVHGVFTKGPFGLKALYSQWNLDGSGP EAIGADKQLGWYIEPSFKLSEQWGVFARYNLWDNTAGDSADSEKKQIDAGVNFWPHPDVVVKADYQHQDNDNGQNQNGFN LGVGYQF >Mature_407_residues MKYELKRTTLAAALLSALAAPAWADMSVEERLKAMESRLNALEAENQALKGQLQSTEQKVTATTAQIEEVSRTASTGGAS WAENTRIGGYGELHYNNLDGEGGASDKEEFDLHRFVLFFGHTFNERTRFFSEVEVEHSIAGEGKNGEIELEQAYVEYDLT PNHRVKGGLFLLPVGLINETHEPPTFYGVERNPVESNIIPATWWAGGAAIAGDLGAGFGYDFAVHEGLGTTAAKSYKPRD GRQKTSNAKANDLAYTARLKWTGMPGLELGGSLQYQSDMTQSLDANAGSATLAEVHGVFTKGPFGLKALYSQWNLDGSGP EAIGADKQLGWYIEPSFKLSEQWGVFARYNLWDNTAGDSADSEKKQIDAGVNFWPHPDVVVKADYQHQDNDNGQNQNGFN LGVGYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44476; Mature: 44476
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYELKRTTLAAALLSALAAPAWADMSVEERLKAMESRLNALEAENQALKGQLQSTEQKV CCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATTAQIEEVSRTASTGGASWAENTRIGGYGELHYNNLDGEGGASDKEEFDLHRFVLFFG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC HTFNERTRFFSEVEVEHSIAGEGKNGEIELEQAYVEYDLTPNHRVKGGLFLLPVGLINET CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEHHHCCC HEPPTFYGVERNPVESNIIPATWWAGGAAIAGDLGAGFGYDFAVHEGLGTTAAKSYKPRD CCCCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCCHHHCCCCCCC GRQKTSNAKANDLAYTARLKWTGMPGLELGGSLQYQSDMTQSLDANAGSATLAEVHGVFT CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHC KGPFGLKALYSQWNLDGSGPEAIGADKQLGWYIEPSFKLSEQWGVFARYNLWDNTAGDSA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCCCCCCC DSEKKQIDAGVNFWPHPDVVVKADYQHQDNDNGQNQNGFNLGVGYQF CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MKYELKRTTLAAALLSALAAPAWADMSVEERLKAMESRLNALEAENQALKGQLQSTEQKV CCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATTAQIEEVSRTASTGGASWAENTRIGGYGELHYNNLDGEGGASDKEEFDLHRFVLFFG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC HTFNERTRFFSEVEVEHSIAGEGKNGEIELEQAYVEYDLTPNHRVKGGLFLLPVGLINET CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEHHHCCC HEPPTFYGVERNPVESNIIPATWWAGGAAIAGDLGAGFGYDFAVHEGLGTTAAKSYKPRD CCCCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCCHHHCCCCCCC GRQKTSNAKANDLAYTARLKWTGMPGLELGGSLQYQSDMTQSLDANAGSATLAEVHGVFT CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHC KGPFGLKALYSQWNLDGSGPEAIGADKQLGWYIEPSFKLSEQWGVFARYNLWDNTAGDSA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEEECCCCCCCCCC DSEKKQIDAGVNFWPHPDVVVKADYQHQDNDNGQNQNGFNLGVGYQF CCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]