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The map label for this gene is ycbZ [H]

Identifier: 74316694

GI number: 74316694

Start: 717129

End: 719561

Strand: Direct

Name: ycbZ [H]

Synonym: Tbd_0676

Alternate gene names: 74316694

Gene position: 717129-719561 (Clockwise)

Preceding gene: 74316693

Following gene: 74316695

Centisome position: 24.65

GC content: 69.75

Gene sequence:

>2433_bases
ATGACGATCGACACCCTGCCTCCCTCCGCGCTGCGCCTGACCATCGATCCCGCTTCGCTCGGGTTCGCCGACACCTCCGA
ACTGCAGGACGAGGCGCTTCCCTGGATCGGGCAAGCGCGCGCCGAGGCGGCCGCGACCTTCGGCCTGGGCATGGGCGCCC
CCGACTACAACCTTTTCGTGCTCGGCGAGGTCGGCAGCGGCCGCTCGTCGCTGCTCAGGCAGGCGATGCACGCCGCGGCG
GCGACGCGGCGCGTGCCGCCCGACCTCTGCTACCTCCACAACTTCGACGCGCCCGAGCGGCCGCTGGCCCTGCGTCTGCC
TGCCGGCCAGGGACGGGCCCTGCGGCAACAACTGGCCGACGCGATCAGGACGCTGCAGAGCGACATTCCGCAGCGTCTCC
AGGGGCCGGACTACAAGGCCGAGCGCGAGCGTATCGAGCAGGCCTGGAAGGACGAGGTCGCGCGCCACTATGCCGACCTC
ACGGCCTTCGCCGAGGCGCGCAGCTTTTCGCTCCATCGCGAGGGCGGCCGCATGGTGTTCACGCTGACCGGCAAGAAGGG
GCAGGCGCTGACCGAGGACGAGGTGCTTGCGCTGCCGAAGGCGCGGCGCATCGCGGTCGAAGAGGCCGAGCAGGAACTGC
GCGCGGAGATCAGTCGCTACATCGAGCAGACCCAGCCGCTGGAGCGGGCCATGAACGAGGCGCTCGCGCGCTCGCGCCGC
CAGTTCGTGAAGCCGCTGGTTGCACGCGAACTGCAGGCGATCCGTAGCGAACTGAAAAAGCAGATAAAGGACGCGGCCAA
GCTCAACGCCTGGCTCGACGCGCTCGAACAGGACCTGCTCGACAACCTCGAAGTGTTCGACGGCGACGAAGGCGATGACG
GCGACGAGCAGGCGCCCGCGACGCCCGCTTCGGTGGTCGCGCGGTACCGCGTCAACCTCGTCGTCGACAACGGCGGTCTC
GCGGGCGCGCCCGTCGTGGTCGAAGACAATCCCGTGCATCGCACGCTCTTCGGCAGCATCGAGTACCAGTCCGAGGCCGA
CGTGCTGATGACCGACTTCTCGCGCATCCGCGCCGGCAGCCTGTTGCAGGCGCACGGCGGCTTCCTGATGCTGCATCTGC
GTGACGTGCTCGCCGACCCGTTAGTGTGGGAGCGTTTGCGCCGCTTCCTGCGCAGCGGGCGGCTGCAGATCGAGGAGCCG
GGCGTGTCGCTCGCGCCGCTCGCCACGATGTCACTCGCGCCCGAGCCGGTCGACGTCGAGGTCAAGATCGTCCTGGTCGG
TTCGCGCGAGCAGTACTACGCCCTGCAGGACGCGGCCCCGGAATTCATGCGGCACTTTCGGGCCAAGGTCGATTTCGCCG
ACAGTTTTCTCGCCCGCGACGAAACCCGCCGCGCGTCGGCGATTTTCGTCGCCCACGCCTGCCGCCAGCACGGGCTGCCG
CATTTTTCTCCTGCCGCGGTTGCACGCCTGCTCGAGGAATCCCATCGCGAGGCGGACGACCAGGCGCGCGAGAGCGCGAT
CTTCGCCGCCACCGAGGCGCTCGTGCTCGAGAGCGCCGCGATTTGCCGGGCGCGCGGGCCGGGGCTCGTCCTCGCCGAAG
ACGTCGAAGTCGCCCTCGTCGCGCGCGCCGCACGCCACGACTATCCCGAGCAGCGCCTGCGCGAGTCGATCGCCGACGGC
GACGTGCTGATCGCGCTGCGTGGCGCGGCGAGTGGCCAGATCAATGCGCTGACCCAGGTCGATCTCGGCGATGCCCGTTT
CGGCCTGCCGGTGCGCGTGTCGGCGCGGACCTACGCCGGCGAGGACGGCGTGCTCAACATCGCGCGCGAGGTCGAGCTCT
CGGGGCCGGTCCACGACAAGGGCGTGTTCATCCTGCAAAGCTATCTCGCCGCGCTGTTCGGCCACCTCGCGCCGCTCTCG
CTCGACGCGTCGATCATTTTTGAACAGCAATATCAAGGGGTCGAAGGCGATTCCGCGTCGTGTGCCGAGTTCTATGCATT
GGTCTCGGCGCTGTCGGGCGTCACGTTCAGCCAGGGTATCGCGGTCACCGGCGCGCTCAATCAGCACGGGGAGGTACTGC
CGGTCGGCGGCATCAACGAAAAGATCGAGGGCTGGTTCCGGGTATGCGAGACCGCGGGCCTCGACGGCCGCCAGGGCGTG
CTGATTCCGGCGCGCAACCGGCGCCATCTGATGCTCGCCCCGGCGGTCGTCGCCGCGGTCGCGGCCGGGCGGTTTCACGT
GCATACGGCCGAGCACGTGCTCGACGGGCTTGCGCTGCTTTCCGGTCTCGCAGCCGGCGAAGCCGACGCGGCGGGACACT
ATCCGCACGACAGCGTCCTCGGGCGCGCCGAGGCGGCGCTGCGGGCCTTCCGTGAGGCGTGCGAGAAGGCGCGAGCGCAT
CGCCCGGAAGCACGGCGGAGCGGGCGGCGCTAG

Upstream 100 bases:

>100_bases
TGCGCCGCGTGCCGCGCGAGTGTCGCGCACTGGGCTGGCCTGCTGGGCGCGACGCGACTTGGGCAATAATCCCGGCATCG
CAAAACGACCGGCGCTCCAC

Downstream 100 bases:

>100_bases
GGTCGGGCGCGCGTCGACAGCGGTGCTCAGGCTCGTCCCGCCGGTGGACTATAGTGAAAGTCGCCAATCCGTTTTGCGAA
GGAGACGATCATGAAGGCGA

Product: putative ATP-dependent protease LA

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 810; Mature: 809

Protein sequence:

>810_residues
MTIDTLPPSALRLTIDPASLGFADTSELQDEALPWIGQARAEAAATFGLGMGAPDYNLFVLGEVGSGRSSLLRQAMHAAA
ATRRVPPDLCYLHNFDAPERPLALRLPAGQGRALRQQLADAIRTLQSDIPQRLQGPDYKAERERIEQAWKDEVARHYADL
TAFAEARSFSLHREGGRMVFTLTGKKGQALTEDEVLALPKARRIAVEEAEQELRAEISRYIEQTQPLERAMNEALARSRR
QFVKPLVARELQAIRSELKKQIKDAAKLNAWLDALEQDLLDNLEVFDGDEGDDGDEQAPATPASVVARYRVNLVVDNGGL
AGAPVVVEDNPVHRTLFGSIEYQSEADVLMTDFSRIRAGSLLQAHGGFLMLHLRDVLADPLVWERLRRFLRSGRLQIEEP
GVSLAPLATMSLAPEPVDVEVKIVLVGSREQYYALQDAAPEFMRHFRAKVDFADSFLARDETRRASAIFVAHACRQHGLP
HFSPAAVARLLEESHREADDQARESAIFAATEALVLESAAICRARGPGLVLAEDVEVALVARAARHDYPEQRLRESIADG
DVLIALRGAASGQINALTQVDLGDARFGLPVRVSARTYAGEDGVLNIAREVELSGPVHDKGVFILQSYLAALFGHLAPLS
LDASIIFEQQYQGVEGDSASCAEFYALVSALSGVTFSQGIAVTGALNQHGEVLPVGGINEKIEGWFRVCETAGLDGRQGV
LIPARNRRHLMLAPAVVAAVAAGRFHVHTAEHVLDGLALLSGLAAGEADAAGHYPHDSVLGRAEAALRAFREACEKARAH
RPEARRSGRR

Sequences:

>Translated_810_residues
MTIDTLPPSALRLTIDPASLGFADTSELQDEALPWIGQARAEAAATFGLGMGAPDYNLFVLGEVGSGRSSLLRQAMHAAA
ATRRVPPDLCYLHNFDAPERPLALRLPAGQGRALRQQLADAIRTLQSDIPQRLQGPDYKAERERIEQAWKDEVARHYADL
TAFAEARSFSLHREGGRMVFTLTGKKGQALTEDEVLALPKARRIAVEEAEQELRAEISRYIEQTQPLERAMNEALARSRR
QFVKPLVARELQAIRSELKKQIKDAAKLNAWLDALEQDLLDNLEVFDGDEGDDGDEQAPATPASVVARYRVNLVVDNGGL
AGAPVVVEDNPVHRTLFGSIEYQSEADVLMTDFSRIRAGSLLQAHGGFLMLHLRDVLADPLVWERLRRFLRSGRLQIEEP
GVSLAPLATMSLAPEPVDVEVKIVLVGSREQYYALQDAAPEFMRHFRAKVDFADSFLARDETRRASAIFVAHACRQHGLP
HFSPAAVARLLEESHREADDQARESAIFAATEALVLESAAICRARGPGLVLAEDVEVALVARAARHDYPEQRLRESIADG
DVLIALRGAASGQINALTQVDLGDARFGLPVRVSARTYAGEDGVLNIAREVELSGPVHDKGVFILQSYLAALFGHLAPLS
LDASIIFEQQYQGVEGDSASCAEFYALVSALSGVTFSQGIAVTGALNQHGEVLPVGGINEKIEGWFRVCETAGLDGRQGV
LIPARNRRHLMLAPAVVAAVAAGRFHVHTAEHVLDGLALLSGLAAGEADAAGHYPHDSVLGRAEAALRAFREACEKARAH
RPEARRSGRR
>Mature_809_residues
TIDTLPPSALRLTIDPASLGFADTSELQDEALPWIGQARAEAAATFGLGMGAPDYNLFVLGEVGSGRSSLLRQAMHAAAA
TRRVPPDLCYLHNFDAPERPLALRLPAGQGRALRQQLADAIRTLQSDIPQRLQGPDYKAERERIEQAWKDEVARHYADLT
AFAEARSFSLHREGGRMVFTLTGKKGQALTEDEVLALPKARRIAVEEAEQELRAEISRYIEQTQPLERAMNEALARSRRQ
FVKPLVARELQAIRSELKKQIKDAAKLNAWLDALEQDLLDNLEVFDGDEGDDGDEQAPATPASVVARYRVNLVVDNGGLA
GAPVVVEDNPVHRTLFGSIEYQSEADVLMTDFSRIRAGSLLQAHGGFLMLHLRDVLADPLVWERLRRFLRSGRLQIEEPG
VSLAPLATMSLAPEPVDVEVKIVLVGSREQYYALQDAAPEFMRHFRAKVDFADSFLARDETRRASAIFVAHACRQHGLPH
FSPAAVARLLEESHREADDQARESAIFAATEALVLESAAICRARGPGLVLAEDVEVALVARAARHDYPEQRLRESIADGD
VLIALRGAASGQINALTQVDLGDARFGLPVRVSARTYAGEDGVLNIAREVELSGPVHDKGVFILQSYLAALFGHLAPLSL
DASIIFEQQYQGVEGDSASCAEFYALVSALSGVTFSQGIAVTGALNQHGEVLPVGGINEKIEGWFRVCETAGLDGRQGVL
IPARNRRHLMLAPAVVAAVAAGRFHVHTAEHVLDGLALLSGLAAGEADAAGHYPHDSVLGRAEAALRAFREACEKARAHR
PEARRSGRR

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=462, Percent_Identity=32.6839826839827, Blast_Score=213, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 88153; Mature: 88022

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDTLPPSALRLTIDPASLGFADTSELQDEALPWIGQARAEAAATFGLGMGAPDYNLFV
CCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE
LGEVGSGRSSLLRQAMHAAAATRRVPPDLCYLHNFDAPERPLALRLPAGQGRALRQQLAD
EEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHH
AIRTLQSDIPQRLQGPDYKAERERIEQAWKDEVARHYADLTAFAEARSFSLHREGGRMVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEE
TLTGKKGQALTEDEVLALPKARRIAVEEAEQELRAEISRYIEQTQPLERAMNEALARSRR
EEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QFVKPLVARELQAIRSELKKQIKDAAKLNAWLDALEQDLLDNLEVFDGDEGDDGDEQAPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCC
TPASVVARYRVNLVVDNGGLAGAPVVVEDNPVHRTLFGSIEYQSEADVLMTDFSRIRAGS
CHHHHHHEEEEEEEEECCCCCCCCEEECCCCCCCCEECCEEECCCCCHHHHHHHHHHCCC
LLQAHGGFLMLHLRDVLADPLVWERLRRFLRSGRLQIEEPGVSLAPLATMSLAPEPVDVE
EEECCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCEE
VKIVLVGSREQYYALQDAAPEFMRHFRAKVDFADSFLARDETRRASAIFVAHACRQHGLP
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HFSPAAVARLLEESHREADDQARESAIFAATEALVLESAAICRARGPGLVLAEDVEVALV
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH
ARAARHDYPEQRLRESIADGDVLIALRGAASGQINALTQVDLGDARFGLPVRVSARTYAG
HHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECEEECC
EDGVLNIAREVELSGPVHDKGVFILQSYLAALFGHLAPLSLDASIIFEQQYQGVEGDSAS
CCCCEEHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHCCCCCCCCH
CAEFYALVSALSGVTFSQGIAVTGALNQHGEVLPVGGINEKIEGWFRVCETAGLDGRQGV
HHHHHHHHHHHCCCCHHCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LIPARNRRHLMLAPAVVAAVAAGRFHVHTAEHVLDGLALLSGLAAGEADAAGHYPHDSVL
EEECCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
GRAEAALRAFREACEKARAHRPEARRSGRR
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
TIDTLPPSALRLTIDPASLGFADTSELQDEALPWIGQARAEAAATFGLGMGAPDYNLFV
CCCCCCCCCEEEEECHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEE
LGEVGSGRSSLLRQAMHAAAATRRVPPDLCYLHNFDAPERPLALRLPAGQGRALRQQLAD
EEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHH
AIRTLQSDIPQRLQGPDYKAERERIEQAWKDEVARHYADLTAFAEARSFSLHREGGRMVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEE
TLTGKKGQALTEDEVLALPKARRIAVEEAEQELRAEISRYIEQTQPLERAMNEALARSRR
EEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QFVKPLVARELQAIRSELKKQIKDAAKLNAWLDALEQDLLDNLEVFDGDEGDDGDEQAPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCC
TPASVVARYRVNLVVDNGGLAGAPVVVEDNPVHRTLFGSIEYQSEADVLMTDFSRIRAGS
CHHHHHHEEEEEEEEECCCCCCCCEEECCCCCCCCEECCEEECCCCCHHHHHHHHHHCCC
LLQAHGGFLMLHLRDVLADPLVWERLRRFLRSGRLQIEEPGVSLAPLATMSLAPEPVDVE
EEECCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCEE
VKIVLVGSREQYYALQDAAPEFMRHFRAKVDFADSFLARDETRRASAIFVAHACRQHGLP
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HFSPAAVARLLEESHREADDQARESAIFAATEALVLESAAICRARGPGLVLAEDVEVALV
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH
ARAARHDYPEQRLRESIADGDVLIALRGAASGQINALTQVDLGDARFGLPVRVSARTYAG
HHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECEEECC
EDGVLNIAREVELSGPVHDKGVFILQSYLAALFGHLAPLSLDASIIFEQQYQGVEGDSAS
CCCCEEHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHCCCCCCCCH
CAEFYALVSALSGVTFSQGIAVTGALNQHGEVLPVGGINEKIEGWFRVCETAGLDGRQGV
HHHHHHHHHHHCCCCHHCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LIPARNRRHLMLAPAVVAAVAAGRFHVHTAEHVLDGLALLSGLAAGEADAAGHYPHDSVL
EEECCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
GRAEAALRAFREACEKARAHRPEARRSGRR
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]