| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316693
Identifier: 74316693
GI number: 74316693
Start: 715799
End: 717097
Strand: Direct
Name: 74316693
Synonym: Tbd_0675
Alternate gene names: NA
Gene position: 715799-717097 (Clockwise)
Preceding gene: 74316689
Following gene: 74316694
Centisome position: 24.6
GC content: 70.05
Gene sequence:
>1299_bases ATGGGACGATGGGCGCGTGTTATTCCCGACTGTAGTGCGAAAACGCAGGGTATGCGAACAGACACGGAAATCGGCGGCGC GACGATGAGGGCGATGAAGACGGGCGCGCGTCCCGTTCTGTTCGGCGCGTTCGACCGCCACAATTTCGGCGATCTGTTGT TTCCCCATCTACTGGCGGCCCTGTTGCCGGATCAACGCTTCGTGTTTCGTGGGCTCGCCGCGCGCGACCTCCGCCGCTTC GGGGGTCATCGCGTCAGGCCACTGGCGTCGGGCTCGCCTCACCTCGTCCACGTCGGCGGTGAATTGCTGACCTGCAGCGC CTGGCAGGCGGCAGTGATGTTGCGCGACGCGGGCGAAACCGACGCGCTCGTTGCGCGCTACGACGCACACCCGGCCGACG CCGCGAAATGGGCGGCCGACCAGCTCGGTACGACGCGCACGATGCCTTACGTCGCGGGACGCGCCCTGCTTGCGCCAAAG GGAAAGCTGATTTTCAACGCCGTCGGCGGCGTCGAATGGCACGCGCTCACCCCCGGGCAGCGCGAAGAAGTGAAGAACGC GCTCGAGGCCGCGGACTGGCTGAGCGTGCGCGACCATGTGACGCAGGACGCGCTGCGGCGGGACGGGGTCGTCGCGACCC TCTGCCCCGACCCTGCCGTGATGCTGAGACAGTGCTTCGGCGCGAGGCTCGAGGCGCGTGCTCGCGGCGGCGCCGTGCGC GCCGTACGGGCGGCGTTTCCGCAGGGCTACCTCGCCTGCCAGTTCAGCGGCGACTTTGCCGACGAGGCGAGCCTCGACGC GCTCGCCGGGGGCCTTGGCGACGCAGCGGCGACAAGCGGGCTCGGCATCGTGCTGTTCCGTGCCGGCGCGGCGCCCTGGC ACGATGACCTTGCCTTGTACGAGAAGGTGCGCGCGCGGCTGCCGCCGGGCCGTGGCCGGCTCTTCACCTCGCTGCATGTC TGGGACATCTGCGCGCTCATCGCAGCCAGCCGCGGAACCATTGCGAGCAGCTTGCACGCGCGCATCGCCGCGCTCGCCTT TGCCCTGCCGCGGGTCAGTCTGAGGAAGCCGCAAGCCGACTCGGGCCAGCCGGACAAGGTCGCCGCGTTCGCCGAAACCT GGGAGCCCGAGGGCTTGCCGCACGGCGTCGTCCCGGCCGAGATCGGCACCGCGACCGCGCGTGCGCTGGCAACGCCGGTC GGCGTCTTGCACGACAATACGGAGGCGGTTTGCGCCGCGTGCCGCGCGAGTGTCGCGCACTGGGCTGGCCTGCTGGGCGC GACGCGACTTGGGCAATAA
Upstream 100 bases:
>100_bases GAACAGCGGCAGGACCGGTGTCTTCGACAGAGTCGAGCTGAAGATCGCGAGACCGCCGACCAGCGCGATGAGGACGAAGA AGGAGGGGCGTGCGGACTTC
Downstream 100 bases:
>100_bases TCCCGGCATCGCAAAACGACCGGCGCTCCACATGACGATCGACACCCTGCCTCCCTCCGCGCTGCGCCTGACCATCGATC CCGCTTCGCTCGGGTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MGRWARVIPDCSAKTQGMRTDTEIGGATMRAMKTGARPVLFGAFDRHNFGDLLFPHLLAALLPDQRFVFRGLAARDLRRF GGHRVRPLASGSPHLVHVGGELLTCSAWQAAVMLRDAGETDALVARYDAHPADAAKWAADQLGTTRTMPYVAGRALLAPK GKLIFNAVGGVEWHALTPGQREEVKNALEAADWLSVRDHVTQDALRRDGVVATLCPDPAVMLRQCFGARLEARARGGAVR AVRAAFPQGYLACQFSGDFADEASLDALAGGLGDAAATSGLGIVLFRAGAAPWHDDLALYEKVRARLPPGRGRLFTSLHV WDICALIAASRGTIASSLHARIAALAFALPRVSLRKPQADSGQPDKVAAFAETWEPEGLPHGVVPAEIGTATARALATPV GVLHDNTEAVCAACRASVAHWAGLLGATRLGQ
Sequences:
>Translated_432_residues MGRWARVIPDCSAKTQGMRTDTEIGGATMRAMKTGARPVLFGAFDRHNFGDLLFPHLLAALLPDQRFVFRGLAARDLRRF GGHRVRPLASGSPHLVHVGGELLTCSAWQAAVMLRDAGETDALVARYDAHPADAAKWAADQLGTTRTMPYVAGRALLAPK GKLIFNAVGGVEWHALTPGQREEVKNALEAADWLSVRDHVTQDALRRDGVVATLCPDPAVMLRQCFGARLEARARGGAVR AVRAAFPQGYLACQFSGDFADEASLDALAGGLGDAAATSGLGIVLFRAGAAPWHDDLALYEKVRARLPPGRGRLFTSLHV WDICALIAASRGTIASSLHARIAALAFALPRVSLRKPQADSGQPDKVAAFAETWEPEGLPHGVVPAEIGTATARALATPV GVLHDNTEAVCAACRASVAHWAGLLGATRLGQ >Mature_431_residues GRWARVIPDCSAKTQGMRTDTEIGGATMRAMKTGARPVLFGAFDRHNFGDLLFPHLLAALLPDQRFVFRGLAARDLRRFG GHRVRPLASGSPHLVHVGGELLTCSAWQAAVMLRDAGETDALVARYDAHPADAAKWAADQLGTTRTMPYVAGRALLAPKG KLIFNAVGGVEWHALTPGQREEVKNALEAADWLSVRDHVTQDALRRDGVVATLCPDPAVMLRQCFGARLEARARGGAVRA VRAAFPQGYLACQFSGDFADEASLDALAGGLGDAAATSGLGIVLFRAGAAPWHDDLALYEKVRARLPPGRGRLFTSLHVW DICALIAASRGTIASSLHARIAALAFALPRVSLRKPQADSGQPDKVAAFAETWEPEGLPHGVVPAEIGTATARALATPVG VLHDNTEAVCAACRASVAHWAGLLGATRLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45790; Mature: 45659
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWARVIPDCSAKTQGMRTDTEIGGATMRAMKTGARPVLFGAFDRHNFGDLLFPHLLAA CCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH LLPDQRFVFRGLAARDLRRFGGHRVRPLASGSPHLVHVGGELLTCSAWQAAVMLRDAGET HCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCEEEEHHHHHHHHHHCCCCC DALVARYDAHPADAAKWAADQLGTTRTMPYVAGRALLAPKGKLIFNAVGGVEWHALTPGQ CCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEEEECCCEEEEEECCCC REEVKNALEAADWLSVRDHVTQDALRRDGVVATLCPDPAVMLRQCFGARLEARARGGAVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHCCCHHH AVRAAFPQGYLACQFSGDFADEASLDALAGGLGDAAATSGLGIVLFRAGAAPWHDDLALY HHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCHHHHHHH EKVRARLPPGRGRLFTSLHVWDICALIAASRGTIASSLHARIAALAFALPRVSLRKPQAD HHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC SGQPDKVAAFAETWEPEGLPHGVVPAEIGTATARALATPVGVLHDNTEAVCAACRASVAH CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHH WAGLLGATRLGQ HHHHHHHHHCCC >Mature Secondary Structure GRWARVIPDCSAKTQGMRTDTEIGGATMRAMKTGARPVLFGAFDRHNFGDLLFPHLLAA CCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH LLPDQRFVFRGLAARDLRRFGGHRVRPLASGSPHLVHVGGELLTCSAWQAAVMLRDAGET HCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCEEEEHHHHHHHHHHCCCCC DALVARYDAHPADAAKWAADQLGTTRTMPYVAGRALLAPKGKLIFNAVGGVEWHALTPGQ CCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEEEECCCEEEEEECCCC REEVKNALEAADWLSVRDHVTQDALRRDGVVATLCPDPAVMLRQCFGARLEARARGGAVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHCCCHHH AVRAAFPQGYLACQFSGDFADEASLDALAGGLGDAAATSGLGIVLFRAGAAPWHDDLALY HHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCHHHHHHH EKVRARLPPGRGRLFTSLHVWDICALIAASRGTIASSLHARIAALAFALPRVSLRKPQAD HHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC SGQPDKVAAFAETWEPEGLPHGVVPAEIGTATARALATPVGVLHDNTEAVCAACRASVAH CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHH WAGLLGATRLGQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA