| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316656
Identifier: 74316656
GI number: 74316656
Start: 677268
End: 677795
Strand: Reverse
Name: 74316656
Synonym: Tbd_0638
Alternate gene names: NA
Gene position: 677795-677268 (Counterclockwise)
Preceding gene: 74316657
Following gene: 74316655
Centisome position: 23.29
GC content: 69.89
Gene sequence:
>528_bases ATGAACCGTCCGAGCGATCCTCCGAGCAAACCCTGGTACCGCGAGCCCTGGCCGTGGTTTCTGATCAGCCTGCCGGCTGC CGCCGTCGTCGGAGGGATCGCGACCGTGTGGATCGCGGCGACCAACGCCGACGGCCTCGTGGTGGGCGACTATTACAAGG CCGGCCTCGCGATCAACCAGGTGCTTGCGCGCGACGAAGAGGCGCGCAGGCTCGACCTCCGCGCGACGCTGCAAACCGAG GACGGAAGCCTCGCACTGAGCCTCGGCGGACGGCTCGCGATGCATCCCGAACGGCTCACGCTCGTGCTCGCGCACCCGAC CCGTGCCGGTATGGATCAGACGCTGGTCTTGCACCACGCCGGGGCCGGCCGCTACCGCACCGCCCTGCCCGCCCTGCCGG CCGGCAAATGGCACGCGCAGCTCAGCGACGACACCAGGGCGTGGCGCCTGTCGGGGGTGGTCTACAGCCCTTTCACCCGT CCGGCCGATCTCGGCGCGGGCGTCACATCCACTGCACAGGGAGACTAA
Upstream 100 bases:
>100_bases TTGCAAGGCCGCTCGATCGAGGTCAGCTTCGTCGTCCAGGCGACCGACGACCCCCGCATCAGGGCCGCAGTCGAGACCAA ATTCTTCAACCGGTGAGCGC
Downstream 100 bases:
>100_bases GATGGAAGCTGCACTGAACCTGCTGTTGACGAGTCCGATCGGACTCTTGAGCCTGTTCACGATCGTGTTCATCATCGGGA TGGGCTTTTTCATGTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNRPSDPPSKPWYREPWPWFLISLPAAAVVGGIATVWIAATNADGLVVGDYYKAGLAINQVLARDEEARRLDLRATLQTE DGSLALSLGGRLAMHPERLTLVLAHPTRAGMDQTLVLHHAGAGRYRTALPALPAGKWHAQLSDDTRAWRLSGVVYSPFTR PADLGAGVTSTAQGD
Sequences:
>Translated_175_residues MNRPSDPPSKPWYREPWPWFLISLPAAAVVGGIATVWIAATNADGLVVGDYYKAGLAINQVLARDEEARRLDLRATLQTE DGSLALSLGGRLAMHPERLTLVLAHPTRAGMDQTLVLHHAGAGRYRTALPALPAGKWHAQLSDDTRAWRLSGVVYSPFTR PADLGAGVTSTAQGD >Mature_175_residues MNRPSDPPSKPWYREPWPWFLISLPAAAVVGGIATVWIAATNADGLVVGDYYKAGLAINQVLARDEEARRLDLRATLQTE DGSLALSLGGRLAMHPERLTLVLAHPTRAGMDQTLVLHHAGAGRYRTALPALPAGKWHAQLSDDTRAWRLSGVVYSPFTR PADLGAGVTSTAQGD
Specific function: Unknown
COG id: COG3198
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18844; Mature: 18844
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPSDPPSKPWYREPWPWFLISLPAAAVVGGIATVWIAATNADGLVVGDYYKAGLAINQ CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCEEEEEEEECCCCEEEECHHHHHHHHHH VLARDEEARRLDLRATLQTEDGSLALSLGGRLAMHPERLTLVLAHPTRAGMDQTLVLHHA HHHCCCCHHEEEEEEEEEECCCCEEEEECCEEEECCCEEEEEEECCCCCCCCEEEEEEEC GAGRYRTALPALPAGKWHAQLSDDTRAWRLSGVVYSPFTRPADLGAGVTSTAQGD CCCCCCCCCCCCCCCCEEEEECCCCCEEEEECEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRPSDPPSKPWYREPWPWFLISLPAAAVVGGIATVWIAATNADGLVVGDYYKAGLAINQ CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCEEEEEEEECCCCEEEECHHHHHHHHHH VLARDEEARRLDLRATLQTEDGSLALSLGGRLAMHPERLTLVLAHPTRAGMDQTLVLHHA HHHCCCCHHEEEEEEEEEECCCCEEEEECCEEEECCCEEEEEEECCCCCCCCEEEEEEEC GAGRYRTALPALPAGKWHAQLSDDTRAWRLSGVVYSPFTRPADLGAGVTSTAQGD CCCCCCCCCCCCCCCCEEEEECCCCCEEEEECEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA