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The map label for this gene is rdxB [H]

Identifier: 74316657

GI number: 74316657

Start: 677800

End: 679251

Strand: Reverse

Name: rdxB [H]

Synonym: Tbd_0639

Alternate gene names: 74316657

Gene position: 679251-677800 (Counterclockwise)

Preceding gene: 74316658

Following gene: 74316656

Centisome position: 23.34

GC content: 65.08

Gene sequence:

>1452_bases
GTGCGCTCACGCGGCTCAGAACCCGACACTGGAACCCCATTGACCGACGACAAGCAGACGGCCCCCGAGGCCCCGATCGA
GCAGCAGCTCTACGCGATCCGGCAAAAAATCCAGCCGCGCGCCGTGCACGGCGTGTTCGCCAACTGGCGCATCGCGCTCG
TGCTGCTGACCCAGGCGGTGTACTACGGCCTGCCCTGGCTGCGCTGGGACGATCGGCAGGCCGTGCTGTTCGATCTTGCC
GCGCGCAAGTTCTACATCTTCGGCCTCGTGTTCTGGCCGCAGGATTTCGTTTATCTGACGGCCATCCTGATCCTCTCCGC
GCTCGCGCTGTTTCTGTTCACCGCGGTCGCGGGACGGCTGTGGTGCGGCTACGCCTGCCCGCAAACCGTCTACACCGAAA
TCTTCATGTGGGTCGAGAACTGGCTCGAGGGCGACCACGTCGCGCGCCGCAAGCTCGACAAGTCGCCGTGGAACGCGACC
AAGCTCAGAAAACGCGGCCTCAAGCACGTCGTCTGGATCGCGATCGCGCTGTGGACCGGTTTCACCTTCGTCGGCTATTT
CACGCCGATCCAGACGCTCGCCACCGAGGTCCTGAACGCTGCACTGACGCCCTGGCAAACCTTCTGGATCCTGTTCTACG
CCTTCGCCACCTGGGGCAATGCCGGCTTCATGCGCGAACAGGTGTGCAAGTACATGTGTCCCTACGCGCGCTTCCAGAGC
GTGATGTTCGATTCCGACACGCTGACCGTGACCTACGACAACTCGATCGGCGAGCCGCGCGGACCGCGCAGCAGGAAGAC
CGATTACAAGGCGGCCGGGCTCGGCACCTGCGTCGACTGCGGCGTCTGCGTCCAGGTCTGCCCGACCGGCATCGACATCC
GCAACGGCCTGCAGTACGAATGCATCGGCTGTGCGGCGTGCATCGACGGTTGCGACCAGATCATGGACAAGATGGGCTAC
CCGCGCGGGCTGATCCGCTACACGACGGAAAACGTCGTCAAGGGTAAATACCCCGACGCCGGCATCCTTCGCCACGTGCT
GCGCCCGCGCACGGTCATCTACAGCGTGCTGCTGTTGGCGAGCGCCGGGGCCTTCGTCTTCAGCCTCGCGACCCGGGTGC
CGCTGCGCGTCGACGTCGTGCGCGACCGCGTCGCGCTGTCGAAGGAAACCGACGAGGGACTGATCGAGAACGTCTATCGC
CTGCAGATCATCAACAAGGACGGCGCGCCGCACCGCTACACGATCGGCGCGACGGGCATCAAAGGCCTCGAGGTCGCGAC
GGCGACCCGCCAGATCGTGGCCGCGCCGCTGCAGACGATCGACGTGCCGGTCAGCCTGATCGCCGACCCGACCGAATTGC
AAGGCCGCTCGATCGAGGTCAGCTTCGTCGTCCAGGCGACCGACGACCCCCGCATCAGGGCCGCAGTCGAGACCAAATTC
TTCAACCGGTGA

Upstream 100 bases:

>100_bases
TGTCGCGGCAGGACGGCGCCGCGGCACCACAGGGGTCGACCGCGGAGTGACCGACGGCTCGCCGGGGCATGCCCGGCGGG
CCGCGTGAGCGCATCGCGCG

Downstream 100 bases:

>100_bases
GCGCATGAACCGTCCGAGCGATCCTCCGAGCAAACCCTGGTACCGCGAGCCCTGGCCGTGGTTTCTGATCAGCCTGCCGG
CTGCCGCCGTCGTCGGAGGG

Product: iron-sulfur 4Fe-4S ferredoxin transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRSRGSEPDTGTPLTDDKQTAPEAPIEQQLYAIRQKIQPRAVHGVFANWRIALVLLTQAVYYGLPWLRWDDRQAVLFDLA
ARKFYIFGLVFWPQDFVYLTAILILSALALFLFTAVAGRLWCGYACPQTVYTEIFMWVENWLEGDHVARRKLDKSPWNAT
KLRKRGLKHVVWIAIALWTGFTFVGYFTPIQTLATEVLNAALTPWQTFWILFYAFATWGNAGFMREQVCKYMCPYARFQS
VMFDSDTLTVTYDNSIGEPRGPRSRKTDYKAAGLGTCVDCGVCVQVCPTGIDIRNGLQYECIGCAACIDGCDQIMDKMGY
PRGLIRYTTENVVKGKYPDAGILRHVLRPRTVIYSVLLLASAGAFVFSLATRVPLRVDVVRDRVALSKETDEGLIENVYR
LQIINKDGAPHRYTIGATGIKGLEVATATRQIVAAPLQTIDVPVSLIADPTELQGRSIEVSFVVQATDDPRIRAAVETKF
FNR

Sequences:

>Translated_483_residues
MRSRGSEPDTGTPLTDDKQTAPEAPIEQQLYAIRQKIQPRAVHGVFANWRIALVLLTQAVYYGLPWLRWDDRQAVLFDLA
ARKFYIFGLVFWPQDFVYLTAILILSALALFLFTAVAGRLWCGYACPQTVYTEIFMWVENWLEGDHVARRKLDKSPWNAT
KLRKRGLKHVVWIAIALWTGFTFVGYFTPIQTLATEVLNAALTPWQTFWILFYAFATWGNAGFMREQVCKYMCPYARFQS
VMFDSDTLTVTYDNSIGEPRGPRSRKTDYKAAGLGTCVDCGVCVQVCPTGIDIRNGLQYECIGCAACIDGCDQIMDKMGY
PRGLIRYTTENVVKGKYPDAGILRHVLRPRTVIYSVLLLASAGAFVFSLATRVPLRVDVVRDRVALSKETDEGLIENVYR
LQIINKDGAPHRYTIGATGIKGLEVATATRQIVAAPLQTIDVPVSLIADPTELQGRSIEVSFVVQATDDPRIRAAVETKF
FNR
>Mature_483_residues
MRSRGSEPDTGTPLTDDKQTAPEAPIEQQLYAIRQKIQPRAVHGVFANWRIALVLLTQAVYYGLPWLRWDDRQAVLFDLA
ARKFYIFGLVFWPQDFVYLTAILILSALALFLFTAVAGRLWCGYACPQTVYTEIFMWVENWLEGDHVARRKLDKSPWNAT
KLRKRGLKHVVWIAIALWTGFTFVGYFTPIQTLATEVLNAALTPWQTFWILFYAFATWGNAGFMREQVCKYMCPYARFQS
VMFDSDTLTVTYDNSIGEPRGPRSRKTDYKAAGLGTCVDCGVCVQVCPTGIDIRNGLQYECIGCAACIDGCDQIMDKMGY
PRGLIRYTTENVVKGKYPDAGILRHVLRPRTVIYSVLLLASAGAFVFSLATRVPLRVDVVRDRVALSKETDEGLIENVYR
LQIINKDGAPHRYTIGATGIKGLEVATATRQIVAAPLQTIDVPVSLIADPTELQGRSIEVSFVVQATDDPRIRAAVETKF
FNR

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54332; Mature: 54332

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]