| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316651
Identifier: 74316651
GI number: 74316651
Start: 671312
End: 672760
Strand: Reverse
Name: 74316651
Synonym: Tbd_0633
Alternate gene names: NA
Gene position: 672760-671312 (Counterclockwise)
Preceding gene: 74316652
Following gene: 74316650
Centisome position: 23.12
GC content: 70.74
Gene sequence:
>1449_bases ATGAAAAACCTGCTGCTGCCCTTGAGCCTCGCGCTCGCCGCCCTGCCCGCCCTCGCGTCGACCGCCGCCCATGCCGCCGA CGAATTGCCGCCCCCCCGTTCCGAGATCGAGGACCCGGTCGACGACCTCCCCCCGCCGCGTGCGACGACGCGCACGCCGG CCGCCGCCCCACCCGCGGCCGAAGCCCCGGCGGACGTGGCGGACGAACTGCCGCCGCCGACGACACGAAGCCGCAGGACG GCCGCCCGCGGCTTCCAGCCGACGCTCAAGGCCGGCGTCGACGACCTGCTGCTCGAGACCGGCGTGCTGCCCGACGCGCC CGAAGCCGACAGCTATACGACCCTGCGCACGGCCGCCTACCTGCTCTGGCAGCCGAGCCGCAACTGGGAGTTGCGCGCCG GTGCCCGCGTCGACGGCATGAAGCAGGCCGGCGGCAGCGCCGATCACGACGAACTCCTGGCCGATTACGCCGACACCTAC GTACGCTATCGCAACGGCGACACGCGCTTGACGCTCGGCGCGCAAACGATCGTCTGGGGCCGCGTCGACGAGGTTCCGCT CGCCGACCGCGTGAGCCGCGTCGACCTCACCCGTTTCATGCTCGACGAGTTGCCCGACCGTCGGCGCGCGCAACTCGCCG CGCGCTGGGAGCAGAGCTTCGGCGACACCAAGCTCGACGCGGTCTGGTTGCCGGTCTTCCGCGCGGCACAATTACCCGAT CCGGCGAGCGTGTGGAGCCCGATCAACCGCACCACCCGCCAGATCGTCGGCATCGACCCGGCGCTCACGCCCTGGCTCGG CGACGCACGCATCGAGGAAGACGAGCACGGCAGCGGCGGCGGCGCCCTGCGCCTGAGCCAGGCGGGCGGGCCGGTCGACT TCGGCGTGACGCTCGCCCGCACCCGCCAGTCGCTGCCCTATTACCGGCTCGACCTCGCGAACCTCTCGCTCACCGCGATC CACCCCTTCAACACCTTCGTCGGCGCCGACCTCGAGTTTGTGCGCGGCGGGCTGACCTGGCGCACCGAACTCGGCTACAC CGACGACGTGCCGGTCACCTTACCGAGCACGGTCATGGACAAGACGCAGTCGCTCGACTGGGTCGGCGCGGTCGAGTTCT TCCCCGGCGGCGGCGACACGCGCGTCAACCTGCAACTCGTCGCCCACGCCCTACAGACCGACAAGACCGTTCTCGAACTC GACGAGTACTACGGCGCGAACGGCGAGATCGAGACGAGCTTCGGCCAGGGCCGCTGGAAGGCCGGCCTGCGCTTCGCGAG CGGCTTCAACGTCGAGGACGTCTACCTGAGCCCGCGCCTCAGCTACGTCGGCTGGGAACCGCACGAACTCTACGTCGCGG CGCACTATTTCGACGGCGAAGCGCGCACGCTGGGCGGCTTCCACGAGGACCATTCGCTGATCTCGCTGGGCGTGCGTACG CGCTTCTGA
Upstream 100 bases:
>100_bases GCATGGTCGTCGACGCCGCGCTCTACGATCAGAAACTTCCGGCCAAACTCTTCACTTCGCAAGCCCTCTCCGACGAAAGC CTGGAATCGGAATACCGCCC
Downstream 100 bases:
>100_bases GCGCCGCGCGCCTATGCAGACGCTCAAGGCATTGGCGAGCGGCAGCCGGGTTCCCTTGCTGCCGCCCTGGGTGGCGCTGG CCCTGCTGCTCGGCATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKNLLLPLSLALAALPALASTAAHAADELPPPRSEIEDPVDDLPPPRATTRTPAAAPPAAEAPADVADELPPPTTRSRRT AARGFQPTLKAGVDDLLLETGVLPDAPEADSYTTLRTAAYLLWQPSRNWELRAGARVDGMKQAGGSADHDELLADYADTY VRYRNGDTRLTLGAQTIVWGRVDEVPLADRVSRVDLTRFMLDELPDRRRAQLAARWEQSFGDTKLDAVWLPVFRAAQLPD PASVWSPINRTTRQIVGIDPALTPWLGDARIEEDEHGSGGGALRLSQAGGPVDFGVTLARTRQSLPYYRLDLANLSLTAI HPFNTFVGADLEFVRGGLTWRTELGYTDDVPVTLPSTVMDKTQSLDWVGAVEFFPGGGDTRVNLQLVAHALQTDKTVLEL DEYYGANGEIETSFGQGRWKAGLRFASGFNVEDVYLSPRLSYVGWEPHELYVAAHYFDGEARTLGGFHEDHSLISLGVRT RF
Sequences:
>Translated_482_residues MKNLLLPLSLALAALPALASTAAHAADELPPPRSEIEDPVDDLPPPRATTRTPAAAPPAAEAPADVADELPPPTTRSRRT AARGFQPTLKAGVDDLLLETGVLPDAPEADSYTTLRTAAYLLWQPSRNWELRAGARVDGMKQAGGSADHDELLADYADTY VRYRNGDTRLTLGAQTIVWGRVDEVPLADRVSRVDLTRFMLDELPDRRRAQLAARWEQSFGDTKLDAVWLPVFRAAQLPD PASVWSPINRTTRQIVGIDPALTPWLGDARIEEDEHGSGGGALRLSQAGGPVDFGVTLARTRQSLPYYRLDLANLSLTAI HPFNTFVGADLEFVRGGLTWRTELGYTDDVPVTLPSTVMDKTQSLDWVGAVEFFPGGGDTRVNLQLVAHALQTDKTVLEL DEYYGANGEIETSFGQGRWKAGLRFASGFNVEDVYLSPRLSYVGWEPHELYVAAHYFDGEARTLGGFHEDHSLISLGVRT RF >Mature_482_residues MKNLLLPLSLALAALPALASTAAHAADELPPPRSEIEDPVDDLPPPRATTRTPAAAPPAAEAPADVADELPPPTTRSRRT AARGFQPTLKAGVDDLLLETGVLPDAPEADSYTTLRTAAYLLWQPSRNWELRAGARVDGMKQAGGSADHDELLADYADTY VRYRNGDTRLTLGAQTIVWGRVDEVPLADRVSRVDLTRFMLDELPDRRRAQLAARWEQSFGDTKLDAVWLPVFRAAQLPD PASVWSPINRTTRQIVGIDPALTPWLGDARIEEDEHGSGGGALRLSQAGGPVDFGVTLARTRQSLPYYRLDLANLSLTAI HPFNTFVGADLEFVRGGLTWRTELGYTDDVPVTLPSTVMDKTQSLDWVGAVEFFPGGGDTRVNLQLVAHALQTDKTVLEL DEYYGANGEIETSFGQGRWKAGLRFASGFNVEDVYLSPRLSYVGWEPHELYVAAHYFDGEARTLGGFHEDHSLISLGVRT RF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52748; Mature: 52748
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLPLSLALAALPALASTAAHAADELPPPRSEIEDPVDDLPPPRATTRTPAAAPPAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCC EAPADVADELPPPTTRSRRTAARGFQPTLKAGVDDLLLETGVLPDAPEADSYTTLRTAAY CCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHEEE LLWQPSRNWELRAGARVDGMKQAGGSADHDELLADYADTYVRYRNGDTRLTLGAQTIVWG EEECCCCCCEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCEEEEEC RVDEVPLADRVSRVDLTRFMLDELPDRRRAQLAARWEQSFGDTKLDAVWLPVFRAAQLPD CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEHHHHHHCCCCC PASVWSPINRTTRQIVGIDPALTPWLGDARIEEDEHGSGGGALRLSQAGGPVDFGVTLAR HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEEHHH TRQSLPYYRLDLANLSLTAIHPFNTFVGADLEFVRGGLTWRTELGYTDDVPVTLPSTVMD HHHCCCEEEEEECCEEEEEEECCHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCHHHHH KTQSLDWVGAVEFFPGGGDTRVNLQLVAHALQTDKTVLELDEYYGANGEIETSFGQGRWK HHHCCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCHHEEHHHHCCCCCEEEECCCCCHHH AGLRFASGFNVEDVYLSPRLSYVGWEPHELYVAAHYFDGEARTLGGFHEDHSLISLGVRT HCEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCC RF CC >Mature Secondary Structure MKNLLLPLSLALAALPALASTAAHAADELPPPRSEIEDPVDDLPPPRATTRTPAAAPPAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCC EAPADVADELPPPTTRSRRTAARGFQPTLKAGVDDLLLETGVLPDAPEADSYTTLRTAAY CCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHEEE LLWQPSRNWELRAGARVDGMKQAGGSADHDELLADYADTYVRYRNGDTRLTLGAQTIVWG EEECCCCCCEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCEEEEEC RVDEVPLADRVSRVDLTRFMLDELPDRRRAQLAARWEQSFGDTKLDAVWLPVFRAAQLPD CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHEEEHHHHHHCCCCC PASVWSPINRTTRQIVGIDPALTPWLGDARIEEDEHGSGGGALRLSQAGGPVDFGVTLAR HHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEEHHH TRQSLPYYRLDLANLSLTAIHPFNTFVGADLEFVRGGLTWRTELGYTDDVPVTLPSTVMD HHHCCCEEEEEECCEEEEEEECCHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCHHHHH KTQSLDWVGAVEFFPGGGDTRVNLQLVAHALQTDKTVLELDEYYGANGEIETSFGQGRWK HHHCCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCHHEEHHHHCCCCCEEEECCCCCHHH AGLRFASGFNVEDVYLSPRLSYVGWEPHELYVAAHYFDGEARTLGGFHEDHSLISLGVRT HCEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCC RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA