| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316652
Identifier: 74316652
GI number: 74316652
Start: 672757
End: 673563
Strand: Reverse
Name: 74316652
Synonym: Tbd_0634
Alternate gene names: NA
Gene position: 673563-672757 (Counterclockwise)
Preceding gene: 74316655
Following gene: 74316651
Centisome position: 23.15
GC content: 66.54
Gene sequence:
>807_bases ATGTCACGTGCCGTCCTGATCTCACTCGCCCGTTTTCTTGTGCTCGCGCTGGTCTGCGTCGGAGGCGCCCGTGCGGACGA GGCGTCCGCGCTGGCGCAACGGGTCTACGACCGGCCGAACGGGCGCGACCTCACGACGCTCGGCCGCATGGTGCTGAGCG AAAAGGGACGCGCACCGCGCATCCGCGAGATGGTGACCTATCGGCTCGACAAGTCGGGCGGCGAGACCGCGAACCTGATC CGCTTCGTCGATCCCCAGGACATCGCCGGGACAGGCCTGCTCAGCATCGACAAGGCCGACGGCGGCACCGACCAGTGGCT CTACCTGCCTGCGCTCGACCGGGTGCGCCGCATCTCGAGCGAGCGCAAGGGCGGGCGCTTCGTCGGATCCGACCTCTATT TCGAAGACCTGCAGGAGCGCAAGCCCTCGCGCGACCGGCATCGCGTGCTCGGCCGGCAGAGCGAAAACGGCATCCTCTGC GACGTGCTCGAGAGCGTGCCGCGCGACGCCGACGATTCGGTCTACAGCAAGCGCATCAGCTGGATCGATCCGGCGACCGC GATCCCGCAACGCATCGACTATTTCGAGAAGGGCGCCGAGCAGCCGGCCAAACGCTGGCTGCTGCGCGGCAAGCAGCGCA ACCAGGGCTACTGGACGCTGACCGACAGCCGCATGATCGACCTCGAAAGCGGCCACCAGACGCGCATGGTCGTCGACGCC GCGCTCTACGATCAGAAACTTCCGGCCAAACTCTTCACTTCGCAAGCCCTCTCCGACGAAAGCCTGGAATCGGAATACCG CCCATGA
Upstream 100 bases:
>100_bases CGCGCCGAAATCCAGCCGTCGCCGTCGGCCCGCGTTTTTTGGGTTAAAGTTCAAAGCTGCCCGCCCGCCCAGTATTGCGC TGCCGTTCCGGAACCCGCCC
Downstream 100 bases:
>100_bases AAAACCTGCTGCTGCCCTTGAGCCTCGCGCTCGCCGCCCTGCCCGCCCTCGCGTCGACCGCCGCCCATGCCGCCGACGAA TTGCCGCCCCCCCGTTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLI RFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILC DVLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA ALYDQKLPAKLFTSQALSDESLESEYRP
Sequences:
>Translated_268_residues MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLI RFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILC DVLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA ALYDQKLPAKLFTSQALSDESLESEYRP >Mature_267_residues SRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLIR FVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCD VLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDAA LYDQKLPAKLFTSQALSDESLESEYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30249; Mature: 30117
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPR CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH IREMVTYRLDKSGGETANLIRFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISS HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH ERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCDVLESVPRDADDSVYSKRIS HCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHC WIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH ALYDQKLPAKLFTSQALSDESLESEYRP HHHHCCCCHHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure SRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH IREMVTYRLDKSGGETANLIRFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISS HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH ERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCDVLESVPRDADDSVYSKRIS HCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHC WIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH ALYDQKLPAKLFTSQALSDESLESEYRP HHHHCCCCHHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]