Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316652

Identifier: 74316652

GI number: 74316652

Start: 672757

End: 673563

Strand: Reverse

Name: 74316652

Synonym: Tbd_0634

Alternate gene names: NA

Gene position: 673563-672757 (Counterclockwise)

Preceding gene: 74316655

Following gene: 74316651

Centisome position: 23.15

GC content: 66.54

Gene sequence:

>807_bases
ATGTCACGTGCCGTCCTGATCTCACTCGCCCGTTTTCTTGTGCTCGCGCTGGTCTGCGTCGGAGGCGCCCGTGCGGACGA
GGCGTCCGCGCTGGCGCAACGGGTCTACGACCGGCCGAACGGGCGCGACCTCACGACGCTCGGCCGCATGGTGCTGAGCG
AAAAGGGACGCGCACCGCGCATCCGCGAGATGGTGACCTATCGGCTCGACAAGTCGGGCGGCGAGACCGCGAACCTGATC
CGCTTCGTCGATCCCCAGGACATCGCCGGGACAGGCCTGCTCAGCATCGACAAGGCCGACGGCGGCACCGACCAGTGGCT
CTACCTGCCTGCGCTCGACCGGGTGCGCCGCATCTCGAGCGAGCGCAAGGGCGGGCGCTTCGTCGGATCCGACCTCTATT
TCGAAGACCTGCAGGAGCGCAAGCCCTCGCGCGACCGGCATCGCGTGCTCGGCCGGCAGAGCGAAAACGGCATCCTCTGC
GACGTGCTCGAGAGCGTGCCGCGCGACGCCGACGATTCGGTCTACAGCAAGCGCATCAGCTGGATCGATCCGGCGACCGC
GATCCCGCAACGCATCGACTATTTCGAGAAGGGCGCCGAGCAGCCGGCCAAACGCTGGCTGCTGCGCGGCAAGCAGCGCA
ACCAGGGCTACTGGACGCTGACCGACAGCCGCATGATCGACCTCGAAAGCGGCCACCAGACGCGCATGGTCGTCGACGCC
GCGCTCTACGATCAGAAACTTCCGGCCAAACTCTTCACTTCGCAAGCCCTCTCCGACGAAAGCCTGGAATCGGAATACCG
CCCATGA

Upstream 100 bases:

>100_bases
CGCGCCGAAATCCAGCCGTCGCCGTCGGCCCGCGTTTTTTGGGTTAAAGTTCAAAGCTGCCCGCCCGCCCAGTATTGCGC
TGCCGTTCCGGAACCCGCCC

Downstream 100 bases:

>100_bases
AAAACCTGCTGCTGCCCTTGAGCCTCGCGCTCGCCGCCCTGCCCGCCCTCGCGTCGACCGCCGCCCATGCCGCCGACGAA
TTGCCGCCCCCCCGTTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLI
RFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILC
DVLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA
ALYDQKLPAKLFTSQALSDESLESEYRP

Sequences:

>Translated_268_residues
MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLI
RFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILC
DVLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA
ALYDQKLPAKLFTSQALSDESLESEYRP
>Mature_267_residues
SRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPRIREMVTYRLDKSGGETANLIR
FVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISSERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCD
VLESVPRDADDSVYSKRISWIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDAA
LYDQKLPAKLFTSQALSDESLESEYRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30249; Mature: 30117

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPR
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH
IREMVTYRLDKSGGETANLIRFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISS
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH
ERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCDVLESVPRDADDSVYSKRIS
HCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHC
WIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH
ALYDQKLPAKLFTSQALSDESLESEYRP
HHHHCCCCHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
SRAVLISLARFLVLALVCVGGARADEASALAQRVYDRPNGRDLTTLGRMVLSEKGRAPR
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCH
IREMVTYRLDKSGGETANLIRFVDPQDIAGTGLLSIDKADGGTDQWLYLPALDRVRRISS
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH
ERKGGRFVGSDLYFEDLQERKPSRDRHRVLGRQSENGILCDVLESVPRDADDSVYSKRIS
HCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHC
WIDPATAIPQRIDYFEKGAEQPAKRWLLRGKQRNQGYWTLTDSRMIDLESGHQTRMVVDA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH
ALYDQKLPAKLFTSQALSDESLESEYRP
HHHHCCCCHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]