| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316645
Identifier: 74316645
GI number: 74316645
Start: 660368
End: 661255
Strand: Direct
Name: 74316645
Synonym: Tbd_0627
Alternate gene names: NA
Gene position: 660368-661255 (Clockwise)
Preceding gene: 74316643
Following gene: 74316646
Centisome position: 22.69
GC content: 67.91
Gene sequence:
>888_bases ATGGTCCGAAATAACCATTCGCGTCAAGTCTCCAGCGACGGCGACAGGTGCCGTAGTAGTGAGATGCCCACCCGACCGGT CCGAGACATGCAAAGACGACGTTTCCTGGCAGGCCTCGCGCTGCTTCCCGTGCTGCCACTCGCCGCCCATGCCGGCAAGA GCGAATTGAACATCGGCATTTATCCCGGCACCGGCAAGGCCGACATCCTGACCGCCGACTTTCGTGCCCTCGCCGGGCCG TTTGCCACGGCACTCGGGGCAGCGCTCGGCCTGAGCGCGCACCCCATGCTGTTCCGCAGCATCAAGAGCGTGGCCCGATC GATGCAAGGGCGCCGTCTCGACGCCTATTTCGTGCCGCCGTCGGTCGCGGTGGCGGCGCTCGACAACGGCTATTCGCCGG TCGTGCGCGTCCGTGACCAGGCGAGCGGGGCGCTCGTGCGGCGCAAGGACGCCGCCCAGGTCGCGACCGTCGCCCTGACC GAGAAGGAGTCGTGGCTCGACGTCATGGCGCGCTACACGCTCAAGCGCCAGGCGCCGGAGGCGGCCCGCGTCCTCAACTT CAAGACTCAGGAAGAGGTCGCGTTGGCCATGCAGCGCGGTTTCGCCGAGGCCGGCAGCCTGCGCGCCAAGGCCGCCGACG CGCTCGTTGCGAGCGGCAGCTTCGAGGTCTGGCACGCGCTGCCGACGACGCCGGACTTCACGCTCATGGCGAGCGACCGC ATGAGCGCGGCCGACCGTGACAAGATCGGCGCGGCCGCCGTCGCGCTCGACGCCGCGGCCATCCAGGCGCTGCAGAAGAC CATCCACAGCAGGGTCAGCGGCTTCGTCGTCGACAAGGAGGCCGATTACAAGGTGATCAAGCAGGCAATCGAAGAAGCCG GCTACTGA
Upstream 100 bases:
>100_bases GAGCGGGGGCGAGAGCGGGGCGGACAGGGGCGACATGGCACGGCAGCGGGGCGGAGGTCGGAACATCTTAAACCCGCGTG ACCGGCGCGCGTGTCCCGGC
Downstream 100 bases:
>100_bases GCTTGCATGGCCGGTCGACGGGCGTACACTCTGGAACCATAGCAAGCTGCAGGAGACTCATCATCATGGACAAGCCGCAT CGCTCCGTCACCGGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVRNNHSRQVSSDGDRCRSSEMPTRPVRDMQRRRFLAGLALLPVLPLAAHAGKSELNIGIYPGTGKADILTADFRALAGP FATALGAALGLSAHPMLFRSIKSVARSMQGRRLDAYFVPPSVAVAALDNGYSPVVRVRDQASGALVRRKDAAQVATVALT EKESWLDVMARYTLKRQAPEAARVLNFKTQEEVALAMQRGFAEAGSLRAKAADALVASGSFEVWHALPTTPDFTLMASDR MSAADRDKIGAAAVALDAAAIQALQKTIHSRVSGFVVDKEADYKVIKQAIEEAGY
Sequences:
>Translated_295_residues MVRNNHSRQVSSDGDRCRSSEMPTRPVRDMQRRRFLAGLALLPVLPLAAHAGKSELNIGIYPGTGKADILTADFRALAGP FATALGAALGLSAHPMLFRSIKSVARSMQGRRLDAYFVPPSVAVAALDNGYSPVVRVRDQASGALVRRKDAAQVATVALT EKESWLDVMARYTLKRQAPEAARVLNFKTQEEVALAMQRGFAEAGSLRAKAADALVASGSFEVWHALPTTPDFTLMASDR MSAADRDKIGAAAVALDAAAIQALQKTIHSRVSGFVVDKEADYKVIKQAIEEAGY >Mature_295_residues MVRNNHSRQVSSDGDRCRSSEMPTRPVRDMQRRRFLAGLALLPVLPLAAHAGKSELNIGIYPGTGKADILTADFRALAGP FATALGAALGLSAHPMLFRSIKSVARSMQGRRLDAYFVPPSVAVAALDNGYSPVVRVRDQASGALVRRKDAAQVATVALT EKESWLDVMARYTLKRQAPEAARVLNFKTQEEVALAMQRGFAEAGSLRAKAADALVASGSFEVWHALPTTPDFTLMASDR MSAADRDKIGAAAVALDAAAIQALQKTIHSRVSGFVVDKEADYKVIKQAIEEAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31691; Mature: 31691
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNNHSRQVSSDGDRCRSSEMPTRPVRDMQRRRFLAGLALLPVLPLAAHAGKSELNIGI CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE YPGTGKADILTADFRALAGPFATALGAALGLSAHPMLFRSIKSVARSMQGRRLDAYFVPP ECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC SVAVAALDNGYSPVVRVRDQASGALVRRKDAAQVATVALTEKESWLDVMARYTLKRQAPE HHEEEECCCCCCCEEEEECCCCCCHHCCHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCH AARVLNFKTQEEVALAMQRGFAEAGSLRAKAADALVASGSFEVWHALPTTPDFTLMASDR HHHHHCCCHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC MSAADRDKIGAAAVALDAAAIQALQKTIHSRVSGFVVDKEADYKVIKQAIEEAGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVRNNHSRQVSSDGDRCRSSEMPTRPVRDMQRRRFLAGLALLPVLPLAAHAGKSELNIGI CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE YPGTGKADILTADFRALAGPFATALGAALGLSAHPMLFRSIKSVARSMQGRRLDAYFVPP ECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC SVAVAALDNGYSPVVRVRDQASGALVRRKDAAQVATVALTEKESWLDVMARYTLKRQAPE HHEEEECCCCCCCEEEEECCCCCCHHCCHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCH AARVLNFKTQEEVALAMQRGFAEAGSLRAKAADALVASGSFEVWHALPTTPDFTLMASDR HHHHHCCCHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC MSAADRDKIGAAAVALDAAAIQALQKTIHSRVSGFVVDKEADYKVIKQAIEEAGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA