| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is galU [H]
Identifier: 74316643
GI number: 74316643
Start: 658040
End: 658909
Strand: Direct
Name: galU [H]
Synonym: Tbd_0625
Alternate gene names: 74316643
Gene position: 658040-658909 (Clockwise)
Preceding gene: 74316642
Following gene: 74316645
Centisome position: 22.61
GC content: 64.14
Gene sequence:
>870_bases ATGCAACAAGTCAGAAAAGCAGTATTTCCGGTTGCCGGCCTCGGCACCCGTTTTTTGCCGGCGACCAAGGCCAGCCCCAA GGAGATGCTCCCGATCGTCGACAAGCCGCTGATCCAGTACGCAGTCGAGGAGGCGATGGACGCGGGTATCACCGACATCA TCTTCGTCAGCAGCCGCACCAAGCGCACGGTCGAGGACCATTTCGACAAGGCCTACGAACTCGAAACCGAACTCGCTGCG CGCGGCAAGAACCGTGATCTCGAACTCGTGCAGTCGATCCGCCCGGCCGGGGTCAATTTCATCTACATCCGCCAGGCCGA GGCGCTCGGGCTCGGCCATGCCGTGCTCTGCGCGCGCCCCGTCGTCGGCGAGGAACCCTTCGCGGTGATCCTGGCCGACG ACCTGCTCGACGGCGCGACGTCGGTCATGAAGCAGATGGTCGACCAGTACAGCTATTACCAGTGCTCGGTCCTCGGCGTA CAGCAGGTCGCGCCGGAAGACACGGCATCCTACGGCATCGTCGACGCGACTCCGCTCGCCGATCGGGTGTCGCGCGTCAA CGCGATCGTCGAAAAACCCAAGCCCGAAGAAGCGCCGTCGACCCTCGGCGTCGTGGGTCGCTACATCCTGACGCCGCGCA TCTTCGACCACATCCAGCAGATCACGCCGGGCGCGGGCGGCGAACTGCAGCTGACCGACGCGATCGCCGGGCTGCTGAAG GAGCAGCAGGTTCTCGCTTACGCCTACGACGGCGTGCGCTACGACTGCGGAAGCAAGCTCGGCTACCTGCAGGCGACCGT CGAATACGCCCTGAAGCACAAGGAAGTCGCAGCCGACTTCGAGGCCTACCTCAAGACGCGGATGTGCTGA
Upstream 100 bases:
>100_bases ACGATCCTCGACGAAGAGGAGCTGTTGGCGCTGCTCGGATCGAATAAAAAGAACGGATAGCGCGGGGATTTTTGAACCAA GACCTTACCTGGGAAGAGAC
Downstream 100 bases:
>100_bases TGCTCGGGCCGGTCTGCGCCGTGCAGCCAGACCGCGGCCTCGAGCGCATTTCCGGTTTCCATTCCCTGCCCTAAAAGCGC GGCGACCATGCCGGTTAGGC
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC
Sequences:
>Translated_289_residues MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC >Mature_289_residues MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=295, Percent_Identity=49.1525423728814, Blast_Score=271, Evalue=5e-74, Organism=Escherichia coli, GI1788355, Length=284, Percent_Identity=45.7746478873239, Blast_Score=241, Evalue=3e-65, Organism=Escherichia coli, GI1788351, Length=269, Percent_Identity=27.5092936802974, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790224, Length=227, Percent_Identity=26.8722466960352, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31671; Mature: 31671
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRT CHHHHHHHCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC KRTVEDHFDKAYELETELAARGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHCCC VVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGVQQVAPEDTASYGIVDATPLA CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCCCCCHHH DRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRT CHHHHHHHCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC KRTVEDHFDKAYELETELAARGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHCCC VVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGVQQVAPEDTASYGIVDATPLA CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCCCCCHHH DRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]