Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is galU [H]

Identifier: 74316643

GI number: 74316643

Start: 658040

End: 658909

Strand: Direct

Name: galU [H]

Synonym: Tbd_0625

Alternate gene names: 74316643

Gene position: 658040-658909 (Clockwise)

Preceding gene: 74316642

Following gene: 74316645

Centisome position: 22.61

GC content: 64.14

Gene sequence:

>870_bases
ATGCAACAAGTCAGAAAAGCAGTATTTCCGGTTGCCGGCCTCGGCACCCGTTTTTTGCCGGCGACCAAGGCCAGCCCCAA
GGAGATGCTCCCGATCGTCGACAAGCCGCTGATCCAGTACGCAGTCGAGGAGGCGATGGACGCGGGTATCACCGACATCA
TCTTCGTCAGCAGCCGCACCAAGCGCACGGTCGAGGACCATTTCGACAAGGCCTACGAACTCGAAACCGAACTCGCTGCG
CGCGGCAAGAACCGTGATCTCGAACTCGTGCAGTCGATCCGCCCGGCCGGGGTCAATTTCATCTACATCCGCCAGGCCGA
GGCGCTCGGGCTCGGCCATGCCGTGCTCTGCGCGCGCCCCGTCGTCGGCGAGGAACCCTTCGCGGTGATCCTGGCCGACG
ACCTGCTCGACGGCGCGACGTCGGTCATGAAGCAGATGGTCGACCAGTACAGCTATTACCAGTGCTCGGTCCTCGGCGTA
CAGCAGGTCGCGCCGGAAGACACGGCATCCTACGGCATCGTCGACGCGACTCCGCTCGCCGATCGGGTGTCGCGCGTCAA
CGCGATCGTCGAAAAACCCAAGCCCGAAGAAGCGCCGTCGACCCTCGGCGTCGTGGGTCGCTACATCCTGACGCCGCGCA
TCTTCGACCACATCCAGCAGATCACGCCGGGCGCGGGCGGCGAACTGCAGCTGACCGACGCGATCGCCGGGCTGCTGAAG
GAGCAGCAGGTTCTCGCTTACGCCTACGACGGCGTGCGCTACGACTGCGGAAGCAAGCTCGGCTACCTGCAGGCGACCGT
CGAATACGCCCTGAAGCACAAGGAAGTCGCAGCCGACTTCGAGGCCTACCTCAAGACGCGGATGTGCTGA

Upstream 100 bases:

>100_bases
ACGATCCTCGACGAAGAGGAGCTGTTGGCGCTGCTCGGATCGAATAAAAAGAACGGATAGCGCGGGGATTTTTGAACCAA
GACCTTACCTGGGAAGAGAC

Downstream 100 bases:

>100_bases
TGCTCGGGCCGGTCTGCGCCGTGCAGCCAGACCGCGGCCTCGAGCGCATTTCCGGTTTCCATTCCCTGCCCTAAAAGCGC
GGCGACCATGCCGGTTAGGC

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA
RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV
QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK
EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC

Sequences:

>Translated_289_residues
MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA
RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV
QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK
EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC
>Mature_289_residues
MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRTKRTVEDHFDKAYELETELAA
RGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARPVVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGV
QQVAPEDTASYGIVDATPLADRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK
EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC

Specific function: May play a role in stationary phase survival [H]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=295, Percent_Identity=49.1525423728814, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI1788355, Length=284, Percent_Identity=45.7746478873239, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1788351, Length=269, Percent_Identity=27.5092936802974, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790224, Length=227, Percent_Identity=26.8722466960352, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 31671; Mature: 31671

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRT
CHHHHHHHCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
KRTVEDHFDKAYELETELAARGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHCCC
VVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGVQQVAPEDTASYGIVDATPLA
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCCCCCHHH
DRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC
HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQVRKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVEEAMDAGITDIIFVSSRT
CHHHHHHHCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
KRTVEDHFDKAYELETELAARGKNRDLELVQSIRPAGVNFIYIRQAEALGLGHAVLCARP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHCCC
VVGEEPFAVILADDLLDGATSVMKQMVDQYSYYQCSVLGVQQVAPEDTASYGIVDATPLA
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCCCCCHHH
DRVSRVNAIVEKPKPEEAPSTLGVVGRYILTPRIFDHIQQITPGAGGELQLTDAIAGLLK
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
EQQVLAYAYDGVRYDCGSKLGYLQATVEYALKHKEVAADFEAYLKTRMC
HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]