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The map label for this gene is ydiA [C]

Identifier: 74316635

GI number: 74316635

Start: 647395

End: 648171

Strand: Reverse

Name: ydiA [C]

Synonym: Tbd_0617

Alternate gene names: 74316635

Gene position: 648171-647395 (Counterclockwise)

Preceding gene: 74316644

Following gene: 74316634

Centisome position: 22.28

GC content: 69.11

Gene sequence:

>777_bases
ATGAATGGCTACAGCGTATTTTGCGTGTCCGATCACACGGGACTCACGATCGAGGCGGTCGCCAAGAGTGTGCTGGCGCA
GTTCCCACGTATCGAGTTTAGCCTGATTACGCTGCCCTTCATCGACGACGCGGCCAAGGCCCGCGCCGCCGCCGGGCGGG
TCGCGGTGACCGCTCGCGCCCTCGTGTTTTCCTCGCTGACCGACCCCGCGTTGCGTGCGCACTTCAAGGACGCGGGGCTG
CACGTGTTCGACCTGTTCGAACACGTCAGCCCCGCGGTCGAACGTGTGCTCGGCGAGCCGGCGACGCCGAGCGGCGGCCA
CACGCACGGCATGGCGAGCGACTACGAGGCGCGCATGGACGCCGTCAATTTCGCGCTCCGGCTCGACGACGGCCTGAGCC
CGGAACACCTCGGCCAAGCCGACCTCATCCTGGTCGGCGTCTCACGCGTCGGCAAGACGCCGACCGCGCTGTATCTCGCC
CTGCATTACGGGCTGCGCGCGGCGAACTACCCGCTCACCCCGGACGACCTCGCGAACGACGGCTTGCCGCGGGCGCTGCA
ACCGCACCTGCCGCGCCTGCGCGGCCTCACGCTGGCCCCCGAGCGCCTCGCGGCGATCCGCGAGGCGCGGCTCCCAGGTA
GCCGCTATGCGAGCGTCGCGCAATGCAGAAGCGAACTCGACGCCGCCGAACGCCTTTTAGCCGCGCACGCGATCCCCCTC
ATCGACACGAGCCGCATGTCGGTCGAGGAAATCGCAGCCCGCCTGAGAGCGTCCTAG

Upstream 100 bases:

>100_bases
ATTTCCCCGAGCGACGCGTTCTTGCCGCCGACGCGCGGCACGTCCGCCATCGACAGCGCATCCAGCGGCACAATATAGTC
ACGAGACATAGGTGAACTCC

Downstream 100 bases:

>100_bases
CCGCCCCAGCCGACCGAGGAAAACGGCGCCTACCGCACCTCATCGTCGGGCGGCTTCATTTCCGCGCCGACATGCCGATA
AGCTCCCTATGGGGGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNGYSVFCVSDHTGLTIEAVAKSVLAQFPRIEFSLITLPFIDDAAKARAAAGRVAVTARALVFSSLTDPALRAHFKDAGL
HVFDLFEHVSPAVERVLGEPATPSGGHTHGMASDYEARMDAVNFALRLDDGLSPEHLGQADLILVGVSRVGKTPTALYLA
LHYGLRAANYPLTPDDLANDGLPRALQPHLPRLRGLTLAPERLAAIREARLPGSRYASVAQCRSELDAAERLLAAHAIPL
IDTSRMSVEEIAARLRAS

Sequences:

>Translated_258_residues
MNGYSVFCVSDHTGLTIEAVAKSVLAQFPRIEFSLITLPFIDDAAKARAAAGRVAVTARALVFSSLTDPALRAHFKDAGL
HVFDLFEHVSPAVERVLGEPATPSGGHTHGMASDYEARMDAVNFALRLDDGLSPEHLGQADLILVGVSRVGKTPTALYLA
LHYGLRAANYPLTPDDLANDGLPRALQPHLPRLRGLTLAPERLAAIREARLPGSRYASVAQCRSELDAAERLLAAHAIPL
IDTSRMSVEEIAARLRAS
>Mature_258_residues
MNGYSVFCVSDHTGLTIEAVAKSVLAQFPRIEFSLITLPFIDDAAKARAAAGRVAVTARALVFSSLTDPALRAHFKDAGL
HVFDLFEHVSPAVERVLGEPATPSGGHTHGMASDYEARMDAVNFALRLDDGLSPEHLGQADLILVGVSRVGKTPTALYLA
LHYGLRAANYPLTPDDLANDGLPRALQPHLPRLRGLTLAPERLAAIREARLPGSRYASVAQCRSELDAAERLLAAHAIPL
IDTSRMSVEEIAARLRAS

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=259, Percent_Identity=42.0849420849421, Blast_Score=199, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y617_THIDA (Q3SL47)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_314375.1
- STRING:   Q3SL47
- GeneID:   3673728
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_0617
- NMPDR:   fig|292415.3.peg.461
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   MERIEAV
- PhylomeDB:   Q3SL47
- ProtClustDB:   PRK05339
- BioCyc:   TDEN292415:TBD_0617-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 27672; Mature: 27672

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGYSVFCVSDHTGLTIEAVAKSVLAQFPRIEFSLITLPFIDDAAKARAAAGRVAVTARA
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHH
LVFSSLTDPALRAHFKDAGLHVFDLFEHVSPAVERVLGEPATPSGGHTHGMASDYEARMD
HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
AVNFALRLDDGLSPEHLGQADLILVGVSRVGKTPTALYLALHYGLRAANYPLTPDDLAND
HHHEEEEECCCCCHHHCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCC
GLPRALQPHLPRLRGLTLAPERLAAIREARLPGSRYASVAQCRSELDAAERLLAAHAIPL
CCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDTSRMSVEEIAARLRAS
CCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNGYSVFCVSDHTGLTIEAVAKSVLAQFPRIEFSLITLPFIDDAAKARAAAGRVAVTARA
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHH
LVFSSLTDPALRAHFKDAGLHVFDLFEHVSPAVERVLGEPATPSGGHTHGMASDYEARMD
HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
AVNFALRLDDGLSPEHLGQADLILVGVSRVGKTPTALYLALHYGLRAANYPLTPDDLAND
HHHEEEEECCCCCHHHCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCC
GLPRALQPHLPRLRGLTLAPERLAAIREARLPGSRYASVAQCRSELDAAERLLAAHAIPL
CCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDTSRMSVEEIAARLRAS
CCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA