Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is bcp [H]

Identifier: 74316604

GI number: 74316604

Start: 615855

End: 616319

Strand: Direct

Name: bcp [H]

Synonym: Tbd_0586

Alternate gene names: 74316604

Gene position: 615855-616319 (Clockwise)

Preceding gene: 74316601

Following gene: 74316605

Centisome position: 21.16

GC content: 60.43

Gene sequence:

>465_bases
ATGCTGAAAACCGGAGACCGCGCGCCGGATTTTTCCAACCCGGACGCGGACATGAATGAGGTCGAGTTGTCGCAGTTCCG
GGGCAAGAACCTGGTGCTGTATTTCTATGTGCGTGACGACACGCCTGGCTGCACCACCGAGGCCATCGAGTTTTCCGAAC
TCGAGAAGGAGTTCGCCAAGCTGCAGACGAGCGTGGTCGGCGTGTCACGCGATGATTGCATCAAGCACGGCGAATTCCGC
GACAAGCACGGCATCGGCGTGCGCCTGCTCGCCGACAAGGACGAGACGACGAGCAAGGCCTACGGCGTGCTGCAGGACAA
GGAAGTCGACGGCGTCAAGCGCAGAAGCGCGACCCGTTCGACTTTCATCATCGACAAACAGGGCGTCATCCGTCACGCCC
TGTACGGCGTTTCGAGCCGCGGCCACGCGGCGGAAGTGCTTCAACTGGTAAAGGAACTCAAGTGA

Upstream 100 bases:

>100_bases
GGGTGCCGCGGGCGAGCGTCGGCCGGGCTTTCCGCGTTCTGGTTAATTTGGGGAACAACCGGGCTAGAATGCTGCCCGAC
ATGCAGTGGCGGAGGTTCAG

Downstream 100 bases:

>100_bases
ACATCGGCAAAGACACCGTGGTGACGATCACCTACGTCGTGAAGGATCTGGACGGCAAGCTGCTCGAGGAAAGCGACGAG
CCGGTCAGCTATCTGCACGG

Product: alkyl hydroperoxide reductase

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR
DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK

Sequences:

>Translated_154_residues
MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR
DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK
>Mature_154_residues
MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR
DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=163, Percent_Identity=37.4233128834356, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI4505591, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15,
Organism=Homo sapiens, GI32455266, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15,
Organism=Homo sapiens, GI32455264, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15,
Organism=Homo sapiens, GI32483377, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI5802974, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI5453549, Length=149, Percent_Identity=33.5570469798658, Blast_Score=67, Evalue=9e-12,
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=35.0993377483444, Blast_Score=95, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193204376, Length=161, Percent_Identity=34.1614906832298, Blast_Score=72, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI32565831, Length=161, Percent_Identity=34.1614906832298, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323613, Length=136, Percent_Identity=37.5, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320661, Length=156, Percent_Identity=33.974358974359, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17738015, Length=158, Percent_Identity=39.2405063291139, Blast_Score=83, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24656348, Length=135, Percent_Identity=37.037037037037, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17864676, Length=135, Percent_Identity=37.037037037037, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17157991, Length=145, Percent_Identity=35.8620689655172, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24641739, Length=145, Percent_Identity=35.8620689655172, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17252; Mature: 17252

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAK
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
LQTSVVGVSRDDCIKHGEFRDKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRS
HHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCC
TFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK
EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAK
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
LQTSVVGVSRDDCIKHGEFRDKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRS
HHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCC
TFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK
EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]