Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316601

Identifier: 74316601

GI number: 74316601

Start: 613303

End: 614133

Strand: Direct

Name: 74316601

Synonym: Tbd_0583

Alternate gene names: NA

Gene position: 613303-614133 (Clockwise)

Preceding gene: 74316600

Following gene: 74316604

Centisome position: 21.08

GC content: 70.16

Gene sequence:

>831_bases
GTGGGTCGACCGACGCTAGACCGGCTCCCCGACCGGCTCGCCGCGTGCCTGCGCTGCGAGCGGCCCGACGCCAAGGCGGC
ATGCGTCCATGCGCTCCATGCCGACTGGCAGGCCGGCCGCGTCGACGCTGCCGCGGAACTTGCGCGCGTGTCGGTCGACG
CGCCCGGGCGGCCCCGCAGGCCGGAGCTGGTGCCGCCGCAGGCGGTGCCGCGCCGCCGCGCGGATACCGTTCCGGGCCGC
GCCGCGCTCGTTCATGCGCTGGCCCACATCGAGTTCAACGCGATCAATCTCGCGCTCGACGCGGCCCATCGCTTTGCCGG
AATGCCCGTCGCGTACTACGCGGACTGGCTGGGCGTCGCGCACGAGGAGGCGCTGCATTTCGCCCTCCTCGACGAACACC
TCGGCACGCTCGGCCATGCCTATGGCGACTTTCCGGCACACGCGGGACTGTGGGATATGGCCTTGAAGACCGCACACGAT
CCGCTCGTGCGCATGGCACTCGTGCCGCGCGTGCTCGAAGCACGGGGCCTCGACGCGACTCCGCTGATCGTCGAGAAGCT
CGAGGCGGCGGGCGACACACGCATGATCGAGATTCTCGCCGTCATCGAGCGCGACGAGATCGGCCATGTCGCGATCGGCA
GTCATTGGTTCGTCTACCTGTGTGCGGCGCGGGGCGTCGACCCCGAAATGACCTTCCGCGCATTGCTCGCCGAGTACGAT
GCGCCGCCGCTGAGACCGCCTTTCAATCTGCGGGCGCGCCGGCAGGCCGGGTTCAGCGAGAGCGAACTCGCCTGGCTCGA
GACGGTTTCAGAGACCGAGCGTCGTCGCTGA

Upstream 100 bases:

>100_bases
GGCTGTTCGGCCACCTCGGTCTGCTGAACGACTGGCCGGCCTTCGTCGTGTCGGCGTTGCCTCTGTTGATCTTCCTCGGC
ATCGCGCTGGCGGGTATCCG

Downstream 100 bases:

>100_bases
CACCTGGCGCGGCGCGCGCTGCCATAGCGCTTCGAAAACCTGGTTCAGTTCCGTCACGCGCGCCGTATCGTCGGTATGTA
GCGCGCCGGGCGGCGAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGR
AALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHD
PLVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD
APPLRPPFNLRARRQAGFSESELAWLETVSETERRR

Sequences:

>Translated_276_residues
MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGR
AALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHD
PLVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD
APPLRPPFNLRARRQAGFSESELAWLETVSETERRR
>Mature_275_residues
GRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGRA
ALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDP
LVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYDA
PPLRPPFNLRARRQAGFSESELAWLETVSETERRR

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 30426; Mature: 30295

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
PELVPPQAVPRRRADTVPGRAALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDPLVRMALVPRVLEARGLDAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC
APPLRPPFNLRARRQAGFSESELAWLETVSETERRR
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRR
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
PELVPPQAVPRRRADTVPGRAALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDPLVRMALVPRVLEARGLDAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC
APPLRPPFNLRARRQAGFSESELAWLETVSETERRR
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]