| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316601
Identifier: 74316601
GI number: 74316601
Start: 613303
End: 614133
Strand: Direct
Name: 74316601
Synonym: Tbd_0583
Alternate gene names: NA
Gene position: 613303-614133 (Clockwise)
Preceding gene: 74316600
Following gene: 74316604
Centisome position: 21.08
GC content: 70.16
Gene sequence:
>831_bases GTGGGTCGACCGACGCTAGACCGGCTCCCCGACCGGCTCGCCGCGTGCCTGCGCTGCGAGCGGCCCGACGCCAAGGCGGC ATGCGTCCATGCGCTCCATGCCGACTGGCAGGCCGGCCGCGTCGACGCTGCCGCGGAACTTGCGCGCGTGTCGGTCGACG CGCCCGGGCGGCCCCGCAGGCCGGAGCTGGTGCCGCCGCAGGCGGTGCCGCGCCGCCGCGCGGATACCGTTCCGGGCCGC GCCGCGCTCGTTCATGCGCTGGCCCACATCGAGTTCAACGCGATCAATCTCGCGCTCGACGCGGCCCATCGCTTTGCCGG AATGCCCGTCGCGTACTACGCGGACTGGCTGGGCGTCGCGCACGAGGAGGCGCTGCATTTCGCCCTCCTCGACGAACACC TCGGCACGCTCGGCCATGCCTATGGCGACTTTCCGGCACACGCGGGACTGTGGGATATGGCCTTGAAGACCGCACACGAT CCGCTCGTGCGCATGGCACTCGTGCCGCGCGTGCTCGAAGCACGGGGCCTCGACGCGACTCCGCTGATCGTCGAGAAGCT CGAGGCGGCGGGCGACACACGCATGATCGAGATTCTCGCCGTCATCGAGCGCGACGAGATCGGCCATGTCGCGATCGGCA GTCATTGGTTCGTCTACCTGTGTGCGGCGCGGGGCGTCGACCCCGAAATGACCTTCCGCGCATTGCTCGCCGAGTACGAT GCGCCGCCGCTGAGACCGCCTTTCAATCTGCGGGCGCGCCGGCAGGCCGGGTTCAGCGAGAGCGAACTCGCCTGGCTCGA GACGGTTTCAGAGACCGAGCGTCGTCGCTGA
Upstream 100 bases:
>100_bases GGCTGTTCGGCCACCTCGGTCTGCTGAACGACTGGCCGGCCTTCGTCGTGTCGGCGTTGCCTCTGTTGATCTTCCTCGGC ATCGCGCTGGCGGGTATCCG
Downstream 100 bases:
>100_bases CACCTGGCGCGGCGCGCGCTGCCATAGCGCTTCGAAAACCTGGTTCAGTTCCGTCACGCGCGCCGTATCGTCGGTATGTA GCGCGCCGGGCGGCGAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGR AALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHD PLVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD APPLRPPFNLRARRQAGFSESELAWLETVSETERRR
Sequences:
>Translated_276_residues MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGR AALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHD PLVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD APPLRPPFNLRARRQAGFSESELAWLETVSETERRR >Mature_275_residues GRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRRPELVPPQAVPRRRADTVPGRA ALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVAHEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDP LVRMALVPRVLEARGLDATPLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYDA PPLRPPFNLRARRQAGFSESELAWLETVSETERRR
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 30426; Mature: 30295
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRR CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC PELVPPQAVPRRRADTVPGRAALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH HEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDPLVRMALVPRVLEARGLDAT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC APPLRPPFNLRARRQAGFSESELAWLETVSETERRR CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRPTLDRLPDRLAACLRCERPDAKAACVHALHADWQAGRVDAAAELARVSVDAPGRPRR CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC PELVPPQAVPRRRADTVPGRAALVHALAHIEFNAINLALDAAHRFAGMPVAYYADWLGVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH HEEALHFALLDEHLGTLGHAYGDFPAHAGLWDMALKTAHDPLVRMALVPRVLEARGLDAT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLIVEKLEAAGDTRMIEILAVIERDEIGHVAIGSHWFVYLCAARGVDPEMTFRALLAEYD HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC APPLRPPFNLRARRQAGFSESELAWLETVSETERRR CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]