| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is bcp [H]
Identifier: 74316604
GI number: 74316604
Start: 615855
End: 616319
Strand: Direct
Name: bcp [H]
Synonym: Tbd_0586
Alternate gene names: 74316604
Gene position: 615855-616319 (Clockwise)
Preceding gene: 74316601
Following gene: 74316605
Centisome position: 21.16
GC content: 60.43
Gene sequence:
>465_bases ATGCTGAAAACCGGAGACCGCGCGCCGGATTTTTCCAACCCGGACGCGGACATGAATGAGGTCGAGTTGTCGCAGTTCCG GGGCAAGAACCTGGTGCTGTATTTCTATGTGCGTGACGACACGCCTGGCTGCACCACCGAGGCCATCGAGTTTTCCGAAC TCGAGAAGGAGTTCGCCAAGCTGCAGACGAGCGTGGTCGGCGTGTCACGCGATGATTGCATCAAGCACGGCGAATTCCGC GACAAGCACGGCATCGGCGTGCGCCTGCTCGCCGACAAGGACGAGACGACGAGCAAGGCCTACGGCGTGCTGCAGGACAA GGAAGTCGACGGCGTCAAGCGCAGAAGCGCGACCCGTTCGACTTTCATCATCGACAAACAGGGCGTCATCCGTCACGCCC TGTACGGCGTTTCGAGCCGCGGCCACGCGGCGGAAGTGCTTCAACTGGTAAAGGAACTCAAGTGA
Upstream 100 bases:
>100_bases GGGTGCCGCGGGCGAGCGTCGGCCGGGCTTTCCGCGTTCTGGTTAATTTGGGGAACAACCGGGCTAGAATGCTGCCCGAC ATGCAGTGGCGGAGGTTCAG
Downstream 100 bases:
>100_bases ACATCGGCAAAGACACCGTGGTGACGATCACCTACGTCGTGAAGGATCTGGACGGCAAGCTGCTCGAGGAAAGCGACGAG CCGGTCAGCTATCTGCACGG
Product: alkyl hydroperoxide reductase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK
Sequences:
>Translated_154_residues MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK >Mature_154_residues MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAKLQTSVVGVSRDDCIKHGEFR DKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRSTFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=163, Percent_Identity=37.4233128834356, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI4505591, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI32455266, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI32455264, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=4e-15, Organism=Homo sapiens, GI32483377, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI5802974, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI5453549, Length=149, Percent_Identity=33.5570469798658, Blast_Score=67, Evalue=9e-12, Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=35.0993377483444, Blast_Score=95, Evalue=2e-21, Organism=Caenorhabditis elegans, GI193204376, Length=161, Percent_Identity=34.1614906832298, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI32565831, Length=161, Percent_Identity=34.1614906832298, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323613, Length=136, Percent_Identity=37.5, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320661, Length=156, Percent_Identity=33.974358974359, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI17738015, Length=158, Percent_Identity=39.2405063291139, Blast_Score=83, Evalue=8e-17, Organism=Drosophila melanogaster, GI24656348, Length=135, Percent_Identity=37.037037037037, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI17864676, Length=135, Percent_Identity=37.037037037037, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI17157991, Length=145, Percent_Identity=35.8620689655172, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24641739, Length=145, Percent_Identity=35.8620689655172, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17252; Mature: 17252
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAK CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH LQTSVVGVSRDDCIKHGEFRDKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRS HHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCC TFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLKTGDRAPDFSNPDADMNEVELSQFRGKNLVLYFYVRDDTPGCTTEAIEFSELEKEFAK CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH LQTSVVGVSRDDCIKHGEFRDKHGIGVRLLADKDETTSKAYGVLQDKEVDGVKRRSATRS HHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCC TFIIDKQGVIRHALYGVSSRGHAAEVLQLVKELK EEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]