The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316582

Identifier: 74316582

GI number: 74316582

Start: 593535

End: 594380

Strand: Reverse

Name: 74316582

Synonym: Tbd_0564

Alternate gene names: NA

Gene position: 594380-593535 (Counterclockwise)

Preceding gene: 74316583

Following gene: 74316581

Centisome position: 20.43

GC content: 62.53

Gene sequence:

>846_bases
ATGAAACAACAAATCATTACGAAGCTGCTGACCGGCATGGCCGGACTGGGCATCGCACTCGGCGCCGCGACGGCATACGC
CTCGCCCGAGTCGGATCGCCAGGAATTCATCCAGTACTACACGTCGAAGTACCCCAACATCAAGCTTGAGGACTACGTCT
ACGGCGCACTCGCCTTCGACGCCGACAGCAAGGCCCAGTACGAGGCCATCATGGAATTCCCGCCCTTCGAAGCGGAGATC
GAGGCGGGCCAGACCTTGTGGGAAACCCCGTTCAAGAACGGCAAGACCTACGCCGACTGTCTGCCCAACGGCGGCCGCCA
GATCGCTGGCAACTATCCGATGTTCGACGAGGCCAAGGGCAAGGTCGTGACGCTGGAGGCGGCGCTCAACGACTGCCGCG
TCGCGAACGGCGAAGCGCCCTACAAGATCAGCGACAAGAACACGCTCGGCAAGCTCACCGCCTATATGCGCACGCTGTCC
GACGGCATGCTGATGAACATCAGGGTGCAGAGCCCGAAAGCGATGGCCGCATATGAAGACGGCAAGAAGACCTTCTTCTC
GCGCAAGGGCCAGCTGAATTTCGCCTGCGCCAGCTGCCACGTGCAGAACGCCGGCGTACGCCTGCGCTCCGAGCTGATCT
CGCCCGCCGTCGGCCACGCCGTGCACTGGCCCGTGTTCCGCGGCGGAGACAATCTCGTGACGCTGCAGAACCGCTACACC
GGCTGCTTCAAGCAGGTCCGCGCCGTGCCGCCCGCAGAAGGCAGCGAGACGATGAACAACCTGGAGTACTTCCACTCCTC
GCTGTCCAACGGCCTGCCGATGAAGGCATCGGTGTTCCGCAAGTAA

Upstream 100 bases:

>100_bases
GACAAGAACAGCGCCGAAGCGACCATCAGCTGATTCATGCGCGACACGAGCGGGGCAATGCCCCGCTCGCGCTTTATTCA
TCAGGTTTCAGGAGGACGGC

Downstream 100 bases:

>100_bases
ACACGCCTCGCGCACCCCGAGAAAAAAGCCCGGCCAACCGGGCTTTTTCTTTGTTCCATCGTGGAACATGGGCAGGAGCT
ACTATTTACCGGGCTCGCCG

Product: diheme cytochrome SoxA

Products: NA

Alternate protein names: Diheme Cytochrome C; Sulfur Oxidation Protein SoxA; Diheme Cytochrome C SoxA; Sulfur Oxidation Protein; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; SoxA Protein; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI
EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS
DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT
GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK

Sequences:

>Translated_281_residues
MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI
EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS
DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT
GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK
>Mature_281_residues
MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI
EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS
DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT
GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30963; Mature: 30963

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHEEEEEEEEC
ADSKAQYEAIMEFPPFEAEIEAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKG
CCCCHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCEEEHHCCCCCCEECCCCCCCCCCCC
KVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLSDGMLMNIRVQSPKAMAAYED
CEEEEEEHHCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC
GKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT
CHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHCCEEECCEEECCCCEEEECHHHH
GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHEEEEEEEEC
ADSKAQYEAIMEFPPFEAEIEAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKG
CCCCHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCEEEHHCCCCCCEECCCCCCCCCCCC
KVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLSDGMLMNIRVQSPKAMAAYED
CEEEEEEHHCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC
GKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT
CHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHCCEEECCEEECCCCEEEECHHHH
GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA