| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316583
Identifier: 74316583
GI number: 74316583
Start: 594448
End: 594762
Strand: Reverse
Name: 74316583
Synonym: Tbd_0565
Alternate gene names: NA
Gene position: 594762-594448 (Counterclockwise)
Preceding gene: 74316584
Following gene: 74316582
Centisome position: 20.44
GC content: 60.95
Gene sequence:
>315_bases ATGGCTGAACCCATGCGTATCCGCGCCACCATGTCGGGCGACGTCGCAGACGTCAAAGTGCTCATGAACCACCCGATGGA AACCGGCCTGCGTAAAGACGCGAAGACCGGTCAACTCGTGCCCGCCCACTTCATCCAGGAAGTGACCGCCACGGTCAACG GCACCAACGTGCTGACCGCTTCGCTCGGCAGCGGCGTGTCCAAGAACCCCTACCTCGGCTTCAAGGTCAAGGGCCCGAAA AAAGGCGACAAGGTCGTCGTCAACTGGTCGGACAACAAGGGCGACAAGAACAGCGCCGAAGCGACCATCAGCTGA
Upstream 100 bases:
>100_bases CCTACACGGCGGCGAAGGAAGTGAAAGTCACCATCGGCGGTTGCGGCGGCTGATCGAGCCCACCTGACCTCCCTCATTCA TATTCAGGAAAGGAAGCCAA
Downstream 100 bases:
>100_bases TTCATGCGCGACACGAGCGGGGCAATGCCCCGCTCGCGCTTTATTCATCAGGTTTCAGGAGGACGGCATGAAACAACAAA TCATTACGAAGCTGCTGACC
Product: sulfur compound chelating protein SoxZ
Products: NA
Alternate protein names: Sulfur Compound Chelating Protein SoxZ; Sulfur Oxidation Protein SoxZ; Sulfur Oxidation Protein; Phosphodiesterase I; Sulfur Oxidation Protein SoxZ Family Protein; Sulfur Compound-Chelating Protein; Sulfur Compound-Chelating Protein SoxZ; Sulfur Oxidation Protein SoxZ; Secreted Protein
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAEPMRIRATMSGDVADVKVLMNHPMETGLRKDAKTGQLVPAHFIQEVTATVNGTNVLTASLGSGVSKNPYLGFKVKGPK KGDKVVVNWSDNKGDKNSAEATIS
Sequences:
>Translated_104_residues MAEPMRIRATMSGDVADVKVLMNHPMETGLRKDAKTGQLVPAHFIQEVTATVNGTNVLTASLGSGVSKNPYLGFKVKGPK KGDKVVVNWSDNKGDKNSAEATIS >Mature_103_residues AEPMRIRATMSGDVADVKVLMNHPMETGLRKDAKTGQLVPAHFIQEVTATVNGTNVLTASLGSGVSKNPYLGFKVKGPKK GDKVVVNWSDNKGDKNSAEATIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11055; Mature: 10924
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPMRIRATMSGDVADVKVLMNHPMETGLRKDAKTGQLVPAHFIQEVTATVNGTNVLTA CCCCEEEEEECCCCHHEEHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE SLGSGVSKNPYLGFKVKGPKKGDKVVVNWSDNKGDKNSAEATIS CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEECC >Mature Secondary Structure AEPMRIRATMSGDVADVKVLMNHPMETGLRKDAKTGQLVPAHFIQEVTATVNGTNVLTA CCCEEEEEECCCCHHEEHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE SLGSGVSKNPYLGFKVKGPKKGDKVVVNWSDNKGDKNSAEATIS CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA