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The map label for this gene is recR

Identifier: 74316535

GI number: 74316535

Start: 546945

End: 547538

Strand: Direct

Name: recR

Synonym: Tbd_0517

Alternate gene names: 74316535

Gene position: 546945-547538 (Clockwise)

Preceding gene: 74316534

Following gene: 74316536

Centisome position: 18.8

GC content: 68.35

Gene sequence:

>594_bases
ATGCAACCCGCCGCGCTGGAAAGCCTGATCAACGCGCTGCGCGTGTTGCCGGGGGTAGGCCCCAAGTCAGCGGCGCGCAT
GGCCTATCACCTGCTCCAGCGCGACCGGCGCGGCGCGGAGACGCTGGCCGGCGCGCTCGGTCATGCATTGACCCATCTGC
ACCACTGCCGCCTGTGCAACAATTTTTCCGAAGCGGAAGTCTGCGAGGTCTGCGCGAGCACGCGGCGCGACCGGCGGCAG
CTCGCCGTGGTCGAGATGCCGGCCGACTTCAACATGATGGAAGCCACGCAAAGCTACAATGGGCTGTACTTCGTGCTGAT
GGGGCGGCTGTCGCCGCTCGACGGCATCGGGCCGCGCGAGATCCATCTCGACCGCCTGATCAACCGTGCGCTCGACGGCA
CCGTAGAGGAAGTCATACTCGCGACCAACTTCACGCCCGAGGGTGAGGCGACCGCCCACACGATAGGCGAGTTGCTCAAG
GCGCGCGGCCTCAAGGTCAGCCGCCTGGCGCGCGGCGTGCCGGTCGGCGGCGAACTCGAATACGTCGACAGCGGCACGCT
CGCCCAGGCGGTGCGCGACCGCCGCGCGCTGTAG

Upstream 100 bases:

>100_bases
AAGGTCGAGACGACCGTGCAGGAAAAGATGGCCGGCGTCACCGCCGGCCTGCCGATTCCACCCGGGATGAAGCTGCCTTT
CTGAGCGGCCCGAGCGCGAG

Downstream 100 bases:

>100_bases
GCGGCGCCGCACCGCGACGCCCCCGGGCGACGCAGGATAAAAAACGGACACACTCACTTTCGGATGACGCAATGGAACTG
ACCGCACTGACCGCCCTTTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCNNFSEAEVCEVCASTRRDRRQ
LAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPREIHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLK
ARGLKVSRLARGVPVGGELEYVDSGTLAQAVRDRRAL

Sequences:

>Translated_197_residues
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCNNFSEAEVCEVCASTRRDRRQ
LAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPREIHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLK
ARGLKVSRLARGVPVGGELEYVDSGTLAQAVRDRRAL
>Mature_197_residues
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCNNFSEAEVCEVCASTRRDRRQ
LAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPREIHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLK
ARGLKVSRLARGVPVGGELEYVDSGTLAQAVRDRRAL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=54.4041450777202, Blast_Score=199, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_THIDA (Q3SLE3)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_314275.1
- ProteinModelPortal:   Q3SLE3
- SMR:   Q3SLE3
- STRING:   Q3SLE3
- GeneID:   3673151
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_0517
- NMPDR:   fig|292415.3.peg.201
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q3SLE3
- ProtClustDB:   PRK00076
- BioCyc:   TDEN292415:TBD_0517-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21507; Mature: 21507

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCN
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
NFSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPRE
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH
IHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLKARGLKVSRLARGVPVGGELE
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEE
YVDSGTLAQAVRDRRAL
ECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHALTHLHHCRLCN
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
NFSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYNGLYFVLMGRLSPLDGIGPRE
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH
IHLDRLINRALDGTVEEVILATNFTPEGEATAHTIGELLKARGLKVSRLARGVPVGGELE
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEE
YVDSGTLAQAVRDRRAL
ECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA