| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316519
Identifier: 74316519
GI number: 74316519
Start: 522250
End: 523266
Strand: Direct
Name: 74316519
Synonym: Tbd_0501
Alternate gene names: NA
Gene position: 522250-523266 (Clockwise)
Preceding gene: 74316517
Following gene: 74316520
Centisome position: 17.95
GC content: 64.9
Gene sequence:
>1017_bases ATGCCGGACATCGTCGTCGTATGGCTTTCGCTTCTTGCCAGCCTCGCCGTGATCGGCGTGGCCGGGGTGCGGCTTTCTCG CTACGGCGACGTCATCGCCGAGAAAAGCGGCATGAGCCGTGGCTGGGTGGGGCTGATCCTGCTGGCCTCGGTGACCTCGC TGCCGGAACTCGTGACCGGGGTTTCCGCGGTGACCGTCGCGGGCGTCCCCGACATCGCCGTCGGCAACATTTTCGGCGCC TGTGTCTTCAATCTCGGCTTCATCGTGGTGCTCGACTTTCTCTGCCGCAAGGAATCGATCTATACCCGCGTGCGCCAGAG CAACGTGCTGGCGGCGGGCTACGGCGTCGCCCTGATCGGGTTCGCCGGATTCAACCTCTTGCTCTACCGCGACGCCGCGA TTCCCGCACTCGGGCATGTCGGCCTCTATTCGCCGATCATCCTGCTGCTGTATTTCCTCGCGATGCGCTCGCTCTATCGC CACGAGAAGGCGCACCTCGCTGACGCGGTCGAGGCGCGCGTGGACTCGTATCCGCAGATGAGCCTCAAGCAGGCGGTCCG GGGCTATGCCGTGGCCGCGCTGGTGGTCGTGGCGGCGGGTGTCTGGCTGCCCCACATCGCGGCGGACCTGGCCGAGGCGA TGAATTGGAAGCAAAGCTTCGTCGGCACCCTGTTCGTCGCCGCCGTGACGACGACGCCGGAAATCGTCGTCACGGTTTCC GCCTTGCGCATGGGCGCCGTCGACTTGGCCATCGGCAACCTGCTCGGCAGCAATCTGTTCAACGTCGCCATTCTCGCCGT CGACGATTTCGCCTACATGCCTGGCCCGCTGTTCGCCGACGTCTCGATCTCGCATGCCGCCTCGGCCTTCTCGGCGATGA TGATGAGCGGACTTGCGATCGTCGGCCTCGTCACGCGGCCGACGTCGCAGGTGTTGCGCTCGGTGAGCTGGATCAGCCTG CTGCTGCTCGCCGTCTACCTGCTGAACAGCCTCTTCCTCTATCTCTATGGACACTGA
Upstream 100 bases:
>100_bases GCCAGTCTGTATGATCGGGCGGCCGGTGTTGTTGGCCGGTCCAAGCCCGGCGGCGGTCCGTCGGCCTCGCCTCTTCAGCC TGTGATGTGGAGAAAAGCTC
Downstream 100 bases:
>100_bases CGCAGACACCGCCCGCCAGGCCTGGCATCGCCTCGACACCGAGGCCGCGGCCGCGCAGTTCGACAGCGACCTGAACCGGG GGCTCTCGGCGCAGGTGGCC
Product: Ca2+/H+ antiporter
Products: NA
Alternate protein names: Cation Antiporter; Sodium/Calcium Exchanger Membrane Protein; Cation Transporter; Sodium-Calcium Exchanger; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; K+-Dependent Na+/Ca+ Exchanger Related-Protein; Ca2+Cation Antiporter CaCA Family; Ca2+/Na+ Antiporter; Ca2+/H+ Antiporter
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPDIVVVWLSLLASLAVIGVAGVRLSRYGDVIAEKSGMSRGWVGLILLASVTSLPELVTGVSAVTVAGVPDIAVGNIFGA CVFNLGFIVVLDFLCRKESIYTRVRQSNVLAAGYGVALIGFAGFNLLLYRDAAIPALGHVGLYSPIILLLYFLAMRSLYR HEKAHLADAVEARVDSYPQMSLKQAVRGYAVAALVVVAAGVWLPHIAADLAEAMNWKQSFVGTLFVAAVTTTPEIVVTVS ALRMGAVDLAIGNLLGSNLFNVAILAVDDFAYMPGPLFADVSISHAASAFSAMMMSGLAIVGLVTRPTSQVLRSVSWISL LLLAVYLLNSLFLYLYGH
Sequences:
>Translated_338_residues MPDIVVVWLSLLASLAVIGVAGVRLSRYGDVIAEKSGMSRGWVGLILLASVTSLPELVTGVSAVTVAGVPDIAVGNIFGA CVFNLGFIVVLDFLCRKESIYTRVRQSNVLAAGYGVALIGFAGFNLLLYRDAAIPALGHVGLYSPIILLLYFLAMRSLYR HEKAHLADAVEARVDSYPQMSLKQAVRGYAVAALVVVAAGVWLPHIAADLAEAMNWKQSFVGTLFVAAVTTTPEIVVTVS ALRMGAVDLAIGNLLGSNLFNVAILAVDDFAYMPGPLFADVSISHAASAFSAMMMSGLAIVGLVTRPTSQVLRSVSWISL LLLAVYLLNSLFLYLYGH >Mature_337_residues PDIVVVWLSLLASLAVIGVAGVRLSRYGDVIAEKSGMSRGWVGLILLASVTSLPELVTGVSAVTVAGVPDIAVGNIFGAC VFNLGFIVVLDFLCRKESIYTRVRQSNVLAAGYGVALIGFAGFNLLLYRDAAIPALGHVGLYSPIILLLYFLAMRSLYRH EKAHLADAVEARVDSYPQMSLKQAVRGYAVAALVVVAAGVWLPHIAADLAEAMNWKQSFVGTLFVAAVTTTPEIVVTVSA LRMGAVDLAIGNLLGSNLFNVAILAVDDFAYMPGPLFADVSISHAASAFSAMMMSGLAIVGLVTRPTSQVLRSVSWISLL LLAVYLLNSLFLYLYGH
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35863; Mature: 35732
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIVVVWLSLLASLAVIGVAGVRLSRYGDVIAEKSGMSRGWVGLILLASVTSLPELVTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VSAVTVAGVPDIAVGNIFGACVFNLGFIVVLDFLCRKESIYTRVRQSNVLAAGYGVALIG HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHH FAGFNLLLYRDAAIPALGHVGLYSPIILLLYFLAMRSLYRHEKAHLADAVEARVDSYPQM HHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLKQAVRGYAVAALVVVAAGVWLPHIAADLAEAMNWKQSFVGTLFVAAVTTTPEIVVTVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHH ALRMGAVDLAIGNLLGSNLFNVAILAVDDFAYMPGPLFADVSISHAASAFSAMMMSGLAI HHHHHHHHHHHHHHHHCHHHHEEEEEEECHHCCCCCCEECCHHHHHHHHHHHHHHHHHHH VGLVTRPTSQVLRSVSWISLLLLAVYLLNSLFLYLYGH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDIVVVWLSLLASLAVIGVAGVRLSRYGDVIAEKSGMSRGWVGLILLASVTSLPELVTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VSAVTVAGVPDIAVGNIFGACVFNLGFIVVLDFLCRKESIYTRVRQSNVLAAGYGVALIG HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHH FAGFNLLLYRDAAIPALGHVGLYSPIILLLYFLAMRSLYRHEKAHLADAVEARVDSYPQM HHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLKQAVRGYAVAALVVVAAGVWLPHIAADLAEAMNWKQSFVGTLFVAAVTTTPEIVVTVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHH ALRMGAVDLAIGNLLGSNLFNVAILAVDDFAYMPGPLFADVSISHAASAFSAMMMSGLAI HHHHHHHHHHHHHHHHCHHHHEEEEEEECHHCCCCCCEECCHHHHHHHHHHHHHHHHHHH VGLVTRPTSQVLRSVSWISLLLLAVYLLNSLFLYLYGH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA