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The map label for this gene is phaC [H]

Identifier: 74316514

GI number: 74316514

Start: 514054

End: 514395

Strand: Reverse

Name: phaC [H]

Synonym: Tbd_0496

Alternate gene names: 74316514

Gene position: 514395-514054 (Counterclockwise)

Preceding gene: 74316515

Following gene: 74316513

Centisome position: 17.68

GC content: 66.67

Gene sequence:

>342_bases
ATGGAAGCCCTCATCGCACTTATCATCGGCGTGCTCACCGCCTGCGGCGTGTTCCTCGCACTGCGCGGCCAGACCTTCCC
CGTCGTGCTCGGCCTCACCTTCCTGTCCTACGCCGTGAACCTGTTCCTGTTCGTCATGGGGCGGCTCGCGGTCGGCGTCC
CGCCCGTGATTTCCGACGCGACCGCCTACACCGACCCCTTGCCGCAGGCGCTGGTCCTTACCGCCATCGTGATCAGCTTC
GGCATGACGGCCTTCGTCATCGTGCTCGCGCTGAAGGCGCGCGCCGAATTCGGCAACGACCATGTCGACGGCACCCACAG
CGGGGAGGACACGGCGCGATGA

Upstream 100 bases:

>100_bases
TCGACCTCGGCGTCTTCCTCGTCGTCGTCGGCGCCACGCTGCTGATCCTGGTCAAGCTCGGCGCGCTGCACGACAGCCGC
ATCCGAAAGGCGCGCCGCTG

Downstream 100 bases:

>100_bases
GCGGCCTGAGCACGCACCTGCCGATCCTGCCCGTGCTGCTGCCGCTGGTCGCCGGCATCGTGCTGCTGGCGCTGCGCGGC
GCGCCGCTCGTGCTCCAGCG

Product: putative monovalent cation/H+ antiporter subunit C

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein C; Pha system subunit C [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEALIALIIGVLTACGVFLALRGQTFPVVLGLTFLSYAVNLFLFVMGRLAVGVPPVISDATAYTDPLPQALVLTAIVISF
GMTAFVIVLALKARAEFGNDHVDGTHSGEDTAR

Sequences:

>Translated_113_residues
MEALIALIIGVLTACGVFLALRGQTFPVVLGLTFLSYAVNLFLFVMGRLAVGVPPVISDATAYTDPLPQALVLTAIVISF
GMTAFVIVLALKARAEFGNDHVDGTHSGEDTAR
>Mature_113_residues
MEALIALIIGVLTACGVFLALRGQTFPVVLGLTFLSYAVNLFLFVMGRLAVGVPPVISDATAYTDPLPQALVLTAIVISF
GMTAFVIVLALKARAEFGNDHVDGTHSGEDTAR

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG1006

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006673
- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: NA

Molecular weight: Translated: 11864; Mature: 11864

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALIALIIGVLTACGVFLALRGQTFPVVLGLTFLSYAVNLFLFVMGRLAVGVPPVISDA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAYTDPLPQALVLTAIVISFGMTAFVIVLALKARAEFGNDHVDGTHSGEDTAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEALIALIIGVLTACGVFLALRGQTFPVVLGLTFLSYAVNLFLFVMGRLAVGVPPVISDA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAYTDPLPQALVLTAIVISFGMTAFVIVLALKARAEFGNDHVDGTHSGEDTAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]