Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316450

Identifier: 74316450

GI number: 74316450

Start: 451307

End: 452035

Strand: Direct

Name: 74316450

Synonym: Tbd_0432

Alternate gene names: NA

Gene position: 451307-452035 (Clockwise)

Preceding gene: 74316449

Following gene: 74316455

Centisome position: 15.51

GC content: 68.72

Gene sequence:

>729_bases
GTGATCGTTCTCTTCACCGATTTTGGCAGCCGGGACCCTTACGTCGGGCAGCTCAAGGCGCGTCTCGTCGAGCGTGCACC
CGGGCATCCGGTCCTCGATCTGCTGCACGAGGTACCTGACTTCAACGCTCACGCCGGGGCGCATCTGCTGGCTGCGCTCG
CCCCGAACTTTCCGTCCGGAAGCGTCTTTCTGGCCGTCGTCGATCCCGGTGTTGGCACGCCGCGCGGCGCGGTCGTCGTC
CAGGCGGGCGGGCGCTGGTTCGTCGGGCCGGACAATGGCTTGACGTCGGTCGTCGCGGCGCGTCAGGCCGACACAAGGGT
GTGGCGTATCGTCTGGCGGCCCGAAGCGCTGGCGCCGACTTTCCACGGGCGTGATCTGTTCGCGCCAATCGCAGCCGACA
TCGCCCGCGGCGAATTCCCCGCCTCGAAACTGGAGGAAGTCGACGCGCTTGCGGTCGAGTTCGACGCCGGCGATCTTGCG
CGCGTCGTCTATATCGACCACTACGGCAACGCCTGGACCGGGCTGCGTTCCGTCCCGAGCGACGCGCGGGTATCGGCCGC
GGGCGGCGTTTTCCGACACGGCGCAAGCTTCGGCGACGTCGCGAAAGGCGAGGGGCTGTGGCTAATGAACAGCGTCGGCC
TGCTCGAACTCGCGGTCAACCGCGGAAGCGCCGCGGCCGTCTACGGCCTCGAGGTCGGCGACCCGGTGCGCGTGCAGCGG
CCGAACTGA

Upstream 100 bases:

>100_bases
CCGGCTTTTTTTACGCGCAGATGCGGGGGTCTCGGGCCGGGGAGGTTGCCGCCCGCGCGCCGTCTCGGCATAGTCGTGGC
TTTCATCGCGGGAGTCGAGC

Downstream 100 bases:

>100_bases
CCGAGGCGAGACTCTGACCAGGGCAAACGTTCGCCGTCGTCCTGGCTGGGCGGAGAGGCGGCCGGACTCAGCGCGGCTAG
ACCCCGAGCAGCACCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV
QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA
RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR
PN

Sequences:

>Translated_242_residues
MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV
QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA
RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR
PN
>Mature_242_residues
MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV
QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA
RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR
PN

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 25618; Mature: 25618

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSG
CEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
SVFLAVVDPGVGTPRGAVVVQAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPT
CEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
FHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLARVVYIDHYGNAWTGLRSVPS
CCCCCHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCEEEEEEEECCCCCHHHHHCCCC
DARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR
CCEEECCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEC
PN
CC
>Mature Secondary Structure
MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSG
CEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
SVFLAVVDPGVGTPRGAVVVQAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPT
CEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
FHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLARVVYIDHYGNAWTGLRSVPS
CCCCCHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCEEEEEEEECCCCCHHHHHCCCC
DARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR
CCEEECCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEC
PN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]