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The map label for this gene is yajR [H]

Identifier: 74316455

GI number: 74316455

Start: 457551

End: 458912

Strand: Direct

Name: yajR [H]

Synonym: Tbd_0437

Alternate gene names: 74316455

Gene position: 457551-458912 (Clockwise)

Preceding gene: 74316450

Following gene: 74316456

Centisome position: 15.72

GC content: 66.08

Gene sequence:

>1362_bases
ATGAACCGCGCTGAGAAGCGCGCCGCATCCGGTCTCGCAGTGATTTTCGGGTTGCGTATGCTGGGCATGTTCCTGATCCT
GCCGGTGTTTGCGCTCTATGCCGAACACCTGCCGGGGGGGCAGAGCCACACCCTCGTCGGGCTTGCGCTCGGCATGTACG
GCCTGACCCAGGCCATACTCATGATTCCCTTCGGCATGGCGTCGGACCGCATCGGGCGTAAAAAGGTCATCATCTTCGGC
CTCGTCCTGTTCGCCCTCGGCAGCTTCGTCGCCGCCGCGGCCACCGATATCTACTGGACGATTGCCGGCCGCGCCTTGCA
GGGCGCCGGGGCGATCTCGGCGGCGGTGACCGCGCTGCTGGCCGACCTCACGCGCGAGGAGCATCGCACCAAGGCGATGG
CGACCATCGGCTCGACGATCGGCGTCGCGTTCGCGCTGTCGCTGGTCGCCGGTCCTGCGCTCAACCGGGTGATCGGCGTA
CCGGGCATCTTCGCGCTTACCGGCGTGCTCGCGCTCACCGCGATCTGGGTCGTCAAGGCCTGGGTGCCCGATCCGGTCGA
CACCCATTTTCATGCCGACGCCGAGGCCAATCCGGCGAAACTCCTCGACGTTCTGAAGGACGCGCAGCTCCTGCGGCTCG
ACTTCGGCATTTTCTCCCTGCATGCCGCGCAAATGGCGATGTTCGTCGTGGTGCCGGTGGCGCTCAAGAATAGCGGCCTC
GACGCCGCGCAGCACTGGATCGTCTACCTGTCGGTATTGCTCGGCTCCTTCGTACTGATGATTCCGGCGATCGTCTACGG
GGAAAAGCGCGGCCAGTTGAAGCCCGTCTTCGTCGGCGCGGTCGCGCTGATGTTGCTGGCCCAGATCGGCTTGGCGCTCG
GCATCAGCCACTTCTGGGGCATCGTCTGGGCGCTATTCTTCTACTTCGTCGCGTTCAATCTGCTCGAAGCCAGCCTGCCC
TCGCTGATCTCCAAGCTTGCCCCGGCGTCGGCCAAGGGAACCGCGATGGGGGTCTACAACACGGCGCAGGCGCTCGGACT
CTTCTTCGGCGGCGTATTCGGCGGCTGGCTGGCGCAGCACTACGGCTTCAGCGCGGTCTTCGTGTTTTGCGTGATCCTGA
TGGCCATCTGGCTGCTCGCCAGCGTGTCGATGGCGTCGCCCCCGGCGATCAAGACCCGCATGTTTCGCGTCGGCACGATG
GCGAGCGATCGGGCGGCCTTGCTGAAGGCTCAGCTCGCGGGTGTGCCGGGCGTCGTCGAGGCCGCCGTGCTTGCCGAAGA
AGGGGTCGCCATGCTCAAGGTCCGGATTTCGGGCTGGGACGAGGCGGGCGCGCGGAGCCTGCTGGAAGCGGCCACCGCCT
GA

Upstream 100 bases:

>100_bases
CATCGGTTAGGGCGGCGGGCGTAATTCGCAACCTGCTAATATAACGGACTTCCGCAATTCACCGAATCCAGTCGTGGCCC
ACATCGACCTGAGCGAGAGC

Downstream 100 bases:

>100_bases
AAGCCGGCCTGATAGAATTCGCAGGGCCCAAGCGCGCACAATCCAACTCATCACGGGGAAAAACATGGCATCCGTCAACA
AAGTCATCCTGGTCGGCAAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNRAEKRAASGLAVIFGLRMLGMFLILPVFALYAEHLPGGQSHTLVGLALGMYGLTQAILMIPFGMASDRIGRKKVIIFG
LVLFALGSFVAAAATDIYWTIAGRALQGAGAISAAVTALLADLTREEHRTKAMATIGSTIGVAFALSLVAGPALNRVIGV
PGIFALTGVLALTAIWVVKAWVPDPVDTHFHADAEANPAKLLDVLKDAQLLRLDFGIFSLHAAQMAMFVVVPVALKNSGL
DAAQHWIVYLSVLLGSFVLMIPAIVYGEKRGQLKPVFVGAVALMLLAQIGLALGISHFWGIVWALFFYFVAFNLLEASLP
SLISKLAPASAKGTAMGVYNTAQALGLFFGGVFGGWLAQHYGFSAVFVFCVILMAIWLLASVSMASPPAIKTRMFRVGTM
ASDRAALLKAQLAGVPGVVEAAVLAEEGVAMLKVRISGWDEAGARSLLEAATA

Sequences:

>Translated_453_residues
MNRAEKRAASGLAVIFGLRMLGMFLILPVFALYAEHLPGGQSHTLVGLALGMYGLTQAILMIPFGMASDRIGRKKVIIFG
LVLFALGSFVAAAATDIYWTIAGRALQGAGAISAAVTALLADLTREEHRTKAMATIGSTIGVAFALSLVAGPALNRVIGV
PGIFALTGVLALTAIWVVKAWVPDPVDTHFHADAEANPAKLLDVLKDAQLLRLDFGIFSLHAAQMAMFVVVPVALKNSGL
DAAQHWIVYLSVLLGSFVLMIPAIVYGEKRGQLKPVFVGAVALMLLAQIGLALGISHFWGIVWALFFYFVAFNLLEASLP
SLISKLAPASAKGTAMGVYNTAQALGLFFGGVFGGWLAQHYGFSAVFVFCVILMAIWLLASVSMASPPAIKTRMFRVGTM
ASDRAALLKAQLAGVPGVVEAAVLAEEGVAMLKVRISGWDEAGARSLLEAATA
>Mature_453_residues
MNRAEKRAASGLAVIFGLRMLGMFLILPVFALYAEHLPGGQSHTLVGLALGMYGLTQAILMIPFGMASDRIGRKKVIIFG
LVLFALGSFVAAAATDIYWTIAGRALQGAGAISAAVTALLADLTREEHRTKAMATIGSTIGVAFALSLVAGPALNRVIGV
PGIFALTGVLALTAIWVVKAWVPDPVDTHFHADAEANPAKLLDVLKDAQLLRLDFGIFSLHAAQMAMFVVVPVALKNSGL
DAAQHWIVYLSVLLGSFVLMIPAIVYGEKRGQLKPVFVGAVALMLLAQIGLALGISHFWGIVWALFFYFVAFNLLEASLP
SLISKLAPASAKGTAMGVYNTAQALGLFFGGVFGGWLAQHYGFSAVFVFCVILMAIWLLASVSMASPPAIKTRMFRVGTM
ASDRAALLKAQLAGVPGVVEAAVLAEEGVAMLKVRISGWDEAGARSLLEAATA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=436, Percent_Identity=44.0366972477064, Blast_Score=340, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47693; Mature: 47693

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]