| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is coaD
Identifier: 74316398
GI number: 74316398
Start: 408401
End: 408883
Strand: Direct
Name: coaD
Synonym: Tbd_0380
Alternate gene names: 74316398
Gene position: 408401-408883 (Clockwise)
Preceding gene: 74316397
Following gene: 74316399
Centisome position: 14.04
GC content: 64.18
Gene sequence:
>483_bases ATGCTGACCGCCGTCTATCCAGGCACCTTCGACCCCATCACGCGCGGCCACGAGGACCTCGTGCGACGCGCCGTCCGCCT CTTCGACCGCGTCGTCGTCGCGGTCGCGGAGTCGAGGAACAAACGCCCGTTCTTCAGCATGGACGAGCGTGTCGCGATGA CACGCGAAGTCCTCGCCGACGTGCCGCAGGTCCGGGTCGAGGGCTTCTCGGGGCTTCTGATCGACTTCGTCGCCGAGCAG GGCGCGATCGCCGTGCTCCGCGGTTTGCGCGCCGCGTCGGACTTCGAATACGAGTTCCAGCTCGCGGGGATGAACCGGAA CCTGAAGCCGGACATCGAGACGCTGTTCCTGACCCCGTCCGAGCAATACATGTTCATCTCGGCGAGCATGATCCGCGAGA TCGCGCAGTTCGGCGGCGACGTCACGCCCTTCGTTCACCCGTTGGTCGCGCGGCGATTAAGTGAGAAAATAAGAGAAAAC TGA
Upstream 100 bases:
>100_bases TCGAGCAGGGGGCGGAGACGGCCGTTCCGCCGGGGTTCGTCGTCCACCGCAGCGGGCGCGCCGGACGTTCGCATTTCGCG CTGCTCATGAAGGAATAGCG
Downstream 100 bases:
>100_bases TTTAGTCGGAGAATGCGATGGCCCTGATGATCACGGACGAGTGCATCAATTGCGACGTCTGTCTGCCGGAATGCCCCAAC GAAGCGATTTCTCAGGGTGA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLTAVYPGTFDPITRGHEDLVRRAVRLFDRVVVAVAESRNKRPFFSMDERVAMTREVLADVPQVRVEGFSGLLIDFVAEQ GAIAVLRGLRAASDFEYEFQLAGMNRNLKPDIETLFLTPSEQYMFISASMIREIAQFGGDVTPFVHPLVARRLSEKIREN
Sequences:
>Translated_160_residues MLTAVYPGTFDPITRGHEDLVRRAVRLFDRVVVAVAESRNKRPFFSMDERVAMTREVLADVPQVRVEGFSGLLIDFVAEQ GAIAVLRGLRAASDFEYEFQLAGMNRNLKPDIETLFLTPSEQYMFISASMIREIAQFGGDVTPFVHPLVARRLSEKIREN >Mature_160_residues MLTAVYPGTFDPITRGHEDLVRRAVRLFDRVVVAVAESRNKRPFFSMDERVAMTREVLADVPQVRVEGFSGLLIDFVAEQ GAIAVLRGLRAASDFEYEFQLAGMNRNLKPDIETLFLTPSEQYMFISASMIREIAQFGGDVTPFVHPLVARRLSEKIREN
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=154, Percent_Identity=49.3506493506493, Blast_Score=168, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_THIDA (Q3SLS2)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314138.1 - HSSP: Q9WZK0 - ProteinModelPortal: Q3SLS2 - SMR: Q3SLS2 - STRING: Q3SLS2 - GeneID: 3672767 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_0380 - NMPDR: fig|292415.3.peg.774 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: Q3SLS2 - BioCyc: TDEN292415:TBD_0380-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18122; Mature: 18122
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAVYPGTFDPITRGHEDLVRRAVRLFDRVVVAVAESRNKRPFFSMDERVAMTREVLAD CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC VPQVRVEGFSGLLIDFVAEQGAIAVLRGLRAASDFEYEFQLAGMNRNLKPDIETLFLTPS CHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC EQYMFISASMIREIAQFGGDVTPFVHPLVARRLSEKIREN CCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTAVYPGTFDPITRGHEDLVRRAVRLFDRVVVAVAESRNKRPFFSMDERVAMTREVLAD CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC VPQVRVEGFSGLLIDFVAEQGAIAVLRGLRAASDFEYEFQLAGMNRNLKPDIETLFLTPS CHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC EQYMFISASMIREIAQFGGDVTPFVHPLVARRLSEKIREN CCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA