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The map label for this gene is ftsY [H]

Identifier: 74316394

GI number: 74316394

Start: 404011

End: 405141

Strand: Reverse

Name: ftsY [H]

Synonym: Tbd_0376

Alternate gene names: 74316394

Gene position: 405141-404011 (Counterclockwise)

Preceding gene: 74316400

Following gene: 74316393

Centisome position: 13.92

GC content: 66.49

Gene sequence:

>1131_bases
ATGAACTTCGCGCATCGAAGCGGAGCCGCGTGCACGAATGATAAGATACCGCAGTCCGTCAAACTGCTCTGCAGACCGCC
TCGATCCGTGTTTAGTTTCTTCAAGTCCAAACCGCCCTCCACCGAGACGCCGGCCGACGCACAAAACGATGCGGCCGACG
CACAAGCCACTGACGCTGCGCCGGACGCGCCGGCCGCCGAAGCCACGCCCCCGGCACGTGTGAGTTGGGCGCAACGGCTC
AAGCAAGGTCTCGCCAAGACGCGCGACCGGCTCGGCGGCCAGCTCGCGGGGCTCTTCGGCGTTGGACGCAAGATCGACGC
CGAGCTGTTCGAGGAACTCGAGACCATCCTGATCACGGCCGACATCGGCGTCGACGCGACCCAGGCCCTGCTCGACACGC
TGCAGAAAAAGGTCCGCCGCGAAAATCTCACCGAGGCGTCGGAACTGCAGACCGCGCTGAAGCAGGCGCTGATCGACATG
CTGCTTCCGCTGCAGGCGCCGCTCGACGTCAAAACGCACAAACCTTTCATCCTCATGCTCGCGGGCGTCAACGGCGCCGG
CAAGACCACGACCATCGGCAAGCTCGCCAAGCTCTACCAGGCGCAAGGCCTCTCGGTTCTGCTCGCCGCCGGCGACACCT
TCCGCGCGGCCGCACGCGAACAACTTCAGGTCTGGGGCGAGCGCAACGGGGTCACCGTCGTCAGCCAGGAAAAAGGCGAC
TCGGCCGCGGTGATTTTCGATGCAATCCAGGCGGCCCGCGCGCGCAATATCGACGTCGTCCTCGCCGACACGGCCGGCCG
GCTGCCGACGCAGTTGCACCTGATGGAAGAGATCCGCAAGGTCAAGCGCGTCATCGAGAAGGCGATCCCGGGCGCCCCGC
ACGAGATCCTGCTCGTGCTCGACGCGAACACCGGACAGAACGCCGTGGCGCAGGTCAAGGCTTTCGACGACGCGCTCGGT
GTCAGCGGACTCGTACTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGCGATCGCCGCAGTCGCGCAGGCGCGTCCGCT
GCCGGTCCGCTACATCGGCGTCGGCGAAACCGTCGACGATCTGCGGCCGTTCGATGCCCGCGACTTCGTCGAGGCCGTGT
TCGCGGCCTGA

Upstream 100 bases:

>100_bases
TCAATGCCGCCGCGTGTGTCGAGCCTGCCAGCAACGCCAGGCAGAATGCCCATAACTTATGCATGTCTTCCTCTCTGATG
GATGAGCCGGAACGGCGCTC

Downstream 100 bases:

>100_bases
CCGGGCATGATCCAGTTCAGCCAGGTCACCAAACGCTATCCGGGCGGGCACGAAGCGCTTTCCGGCGCCAGCTTCAGCAT
CGAGAAAGGCGAGCTCGTGT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNFAHRSGAACTNDKIPQSVKLLCRPPRSVFSFFKSKPPSTETPADAQNDAADAQATDAAPDAPAAEATPPARVSWAQRL
KQGLAKTRDRLGGQLAGLFGVGRKIDAELFEELETILITADIGVDATQALLDTLQKKVRRENLTEASELQTALKQALIDM
LLPLQAPLDVKTHKPFILMLAGVNGAGKTTTIGKLAKLYQAQGLSVLLAAGDTFRAAAREQLQVWGERNGVTVVSQEKGD
SAAVIFDAIQAARARNIDVVLADTAGRLPTQLHLMEEIRKVKRVIEKAIPGAPHEILLVLDANTGQNAVAQVKAFDDALG
VSGLVLTKLDGTAKGGAIAAVAQARPLPVRYIGVGETVDDLRPFDARDFVEAVFAA

Sequences:

>Translated_376_residues
MNFAHRSGAACTNDKIPQSVKLLCRPPRSVFSFFKSKPPSTETPADAQNDAADAQATDAAPDAPAAEATPPARVSWAQRL
KQGLAKTRDRLGGQLAGLFGVGRKIDAELFEELETILITADIGVDATQALLDTLQKKVRRENLTEASELQTALKQALIDM
LLPLQAPLDVKTHKPFILMLAGVNGAGKTTTIGKLAKLYQAQGLSVLLAAGDTFRAAAREQLQVWGERNGVTVVSQEKGD
SAAVIFDAIQAARARNIDVVLADTAGRLPTQLHLMEEIRKVKRVIEKAIPGAPHEILLVLDANTGQNAVAQVKAFDDALG
VSGLVLTKLDGTAKGGAIAAVAQARPLPVRYIGVGETVDDLRPFDARDFVEAVFAA
>Mature_376_residues
MNFAHRSGAACTNDKIPQSVKLLCRPPRSVFSFFKSKPPSTETPADAQNDAADAQATDAAPDAPAAEATPPARVSWAQRL
KQGLAKTRDRLGGQLAGLFGVGRKIDAELFEELETILITADIGVDATQALLDTLQKKVRRENLTEASELQTALKQALIDM
LLPLQAPLDVKTHKPFILMLAGVNGAGKTTTIGKLAKLYQAQGLSVLLAAGDTFRAAAREQLQVWGERNGVTVVSQEKGD
SAAVIFDAIQAARARNIDVVLADTAGRLPTQLHLMEEIRKVKRVIEKAIPGAPHEILLVLDANTGQNAVAQVKAFDDALG
VSGLVLTKLDGTAKGGAIAAVAQARPLPVRYIGVGETVDDLRPFDARDFVEAVFAA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=274, Percent_Identity=31.3868613138686, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI226371618, Length=235, Percent_Identity=33.1914893617021, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI295424842, Length=332, Percent_Identity=32.5301204819277, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI23308697, Length=332, Percent_Identity=32.5301204819277, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI89061728, Length=125, Percent_Identity=37.6, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1789874, Length=312, Percent_Identity=54.4871794871795, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1788963, Length=285, Percent_Identity=32.9824561403509, Blast_Score=144, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=28.9377289377289, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI193206261, Length=305, Percent_Identity=32.1311475409836, Blast_Score=116, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=274, Percent_Identity=31.3868613138686, Blast_Score=131, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=267, Percent_Identity=29.2134831460674, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17647949, Length=272, Percent_Identity=29.0441176470588, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=28.2392026578073, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 39944; Mature: 39944

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFAHRSGAACTNDKIPQSVKLLCRPPRSVFSFFKSKPPSTETPADAQNDAADAQATDAA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDAPAAEATPPARVSWAQRLKQGLAKTRDRLGGQLAGLFGVGRKIDAELFEELETILITA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHEEEEE
DIGVDATQALLDTLQKKVRRENLTEASELQTALKQALIDMLLPLQAPLDVKTHKPFILML
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AGVNGAGKTTTIGKLAKLYQAQGLSVLLAAGDTFRAAAREQLQVWGERNGVTVVSQEKGD
ECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
SAAVIFDAIQAARARNIDVVLADTAGRLPTQLHLMEEIRKVKRVIEKAIPGAPHEILLVL
CHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DANTGQNAVAQVKAFDDALGVSGLVLTKLDGTAKGGAIAAVAQARPLPVRYIGVGETVDD
ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCHHH
LRPFDARDFVEAVFAA
CCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNFAHRSGAACTNDKIPQSVKLLCRPPRSVFSFFKSKPPSTETPADAQNDAADAQATDAA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDAPAAEATPPARVSWAQRLKQGLAKTRDRLGGQLAGLFGVGRKIDAELFEELETILITA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHEEEEE
DIGVDATQALLDTLQKKVRRENLTEASELQTALKQALIDMLLPLQAPLDVKTHKPFILML
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
AGVNGAGKTTTIGKLAKLYQAQGLSVLLAAGDTFRAAAREQLQVWGERNGVTVVSQEKGD
ECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
SAAVIFDAIQAARARNIDVVLADTAGRLPTQLHLMEEIRKVKRVIEKAIPGAPHEILLVL
CHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DANTGQNAVAQVKAFDDALGVSGLVLTKLDGTAKGGAIAAVAQARPLPVRYIGVGETVDD
ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCHHH
LRPFDARDFVEAVFAA
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]