Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316400

Identifier: 74316400

GI number: 74316400

Start: 409168

End: 411126

Strand: Reverse

Name: 74316400

Synonym: Tbd_0382

Alternate gene names: NA

Gene position: 411126-409168 (Counterclockwise)

Preceding gene: 74316401

Following gene: 74316394

Centisome position: 14.13

GC content: 66.21

Gene sequence:

>1959_bases
ATGAAATCCACGACCCTCGTTGACGAGTTCGAGCATTACAGCAGCTGGCGCGACGCCGTCCGCCTGCGTGTCGTGGCTTT
GCGCGACTGGCTGCACGCCCATGAGCTCGGCGACGCCGAGTCGGCGCTGCGGCTCGATCAACTGCTGGGCCGCCTGCAGG
CGGACACGCTCAACGTCGCGTTCGTCGCCGAGTTCTCGCGCGGCAAATCGGAGCTGATCAACGCGATCTTCTTTTCCGAC
TACAGCCGGCGCGTGCTGCCGTCCGCGGCCGGACGCACGACCATGTGCCCGACCGAGCTCGCGTACACGCCCGCACGCCG
GCCTTCGCTGCGCCTGTTGCCGATCGAGACGAAAGCACAGGCCGGCAGCATCGCCGACTTCAAGCGCGACGACGACGCTT
GGACCGAACTCCCGCTCGATCTCGACTCCGCGGCGAACATGAGCGAAACGCTGCGACATCTGGCCGACACGATTCCGGCG
GACCGGGCGACGGCGACGGCGTACGGCCTGATCGACCCCGACGATCAGGAGACGCTGCGCAGCCTCGAGCGTGACGGCAG
CATCGCCATCCCGCGCTGGCGCCACGCCTTGATCAACTTCCCGCATCCGCTCCTCAAACAGGGGCTCGTGATCCTCGACA
CGCCCGGGCTCAACGCGATCGGCACCGAGCCGGAACTGACGCTCAACATGCTGCCCGCCGCGCACGCGGTGCTGTTTCTG
CTCGCCGCCGACACCGGCGTCACCAAGTCCGACATCGCGATCTGGCGCGAGCACATCGCAGCCGCGCACGGTACGAGCCG
CGCACGCCTCGTGGTCCTGAACAAGATCGACGGCCTGTGGGACGATCTCAAGACCGCGGCCGAGATCGACGCCGAAGTCG
CCCGACAGGCCGCGACCACCGCGGCCCTGCTCGACGTGGCGCCAGGCCAGGTCTATCCCGTATCGGCGCAAAAGGCTTTG
GTCGCGAAAGTACGCAGCGACGACGCTCTGCTCGCCAAAAGCCGCCTGCCCGAGCTCGAGGCGGCGCTGACCCAGGAACT
GATTCCCTGTAAGCAGGCGCTCGTCGCAGAATCGGCGAGTGCGGCCGTCGAAGACGTGGTGATCAAGACGACCGAACTGC
TGGAAACCCGGCTCGCCATCCTTCAGGATCAGATCGACGAACTTCAGGGGCTGCGCGGCAAGAACCGGGACGCGATCCAG
CACATGATGGCCAAGGCCAACGAGGACAAGCGGCAGTTCGAGCGGGGACTGCAGCAATTCAACGCGCTGCGCAACGTGTT
CGCGTCGCAGGTCGAGACGCTGCGGCGGCAGCTCGGCATGTCGGCCTTGCGTCGCGCGGTGCGCGACACCCGCCACGCCA
TGGAAAAAAGCCGCTTCAGCGGCGGCCTGCGCGACGCAATGGGCCGGTTCTTCCGCCAGGTCGACGACAACCTCGAGGCA
TCCGCCGCAAGCATCAGCGAAATCCGCATGATGACCGCGATGTACCGGAAATTCAGCGACGAGCACGGACTCGCAGCGGT
CAATCCGCCGGACTACGGCCTCGGCAAGTACCGCAAGGAAATGGTCCGTCTCGAACGCATCTTCGACGAGCGCTTCAATA
CCGTGTTCAAGATGCTGACGGTGGGCCAGAGCCAGTTGACGGCGCGGTTTTTCGAGACCCTAGCGAGCAAGGTCGTGCAG
GTCTTCGAACTCGCGAACAACGAGACCGAAGCCTGGCTCAAGGCGCTCATCGCGCCCATGGAGACGCAGGTCCGCGAACA
CGAGATCCAGCTCAGGCGGCGGCTCGAAAACGTCAGCCGCATCCACGCCGCGACCGAGACGCTCGACGAGCGCATCGTCG
AACTCGAAACCTCGATGGCGGGGGTCGGCGACCAGCTCGAAAATCTGGCGCGCATCAACGCGGGGATCGGTGCGGCGCTC
GCCGTGCACGACGAGGCGCCGCGGGCGCGGACGGCCTGA

Upstream 100 bases:

>100_bases
GAGCTTCTACTGCCCGACGTGCCAGCGCTGATGGCCGGCAAATCAAGTTTGATCCCGGCGTGTCGTTAACCTCCTGTCCT
GAGCGCGGCCGATCCGCCTG

Downstream 100 bases:

>100_bases
ACCGCCCGCAAGGGCCTACTTTTCCACCGTCAGGCGCAGGAATTTTTCCTGCAGTTGTTCGGGCGTTTCGGGATAGCTCG
GGTTCTTCGGAATGCAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD
YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA
DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL
LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL
VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ
HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA
SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ
VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL
AVHDEAPRARTA

Sequences:

>Translated_652_residues
MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD
YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA
DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL
LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL
VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ
HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA
SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ
VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL
AVHDEAPRARTA
>Mature_652_residues
MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD
YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA
DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL
LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL
VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ
HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA
SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ
VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL
AVHDEAPRARTA

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72456; Mature: 72456

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
FVAEFSRGKSELINAIFFSDYSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQ
EEEHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC
AGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPADRATATAYGLIDPDDQETLR
CCCCHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHH
SLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL
HHHCCCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATT
HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLDVAPGQVYPVSAQKALVAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESAS
HHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQHMMAKANEDKRQFERGLQQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
NALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLT
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGQSQLTARFFETLASKVVQVFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHAATETLDERIVELETSMAGVGDQLENLARINAGIGAALAVHDEAPRARTA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
FVAEFSRGKSELINAIFFSDYSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQ
EEEHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC
AGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPADRATATAYGLIDPDDQETLR
CCCCHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHH
SLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL
HHHCCCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATT
HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLDVAPGQVYPVSAQKALVAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESAS
HHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQHMMAKANEDKRQFERGLQQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
NALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLT
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGQSQLTARFFETLASKVVQVFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHAATETLDERIVELETSMAGVGDQLENLARINAGIGAALAVHDEAPRARTA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA