Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316364

Identifier: 74316364

GI number: 74316364

Start: 364203

End: 364943

Strand: Reverse

Name: 74316364

Synonym: Tbd_0346

Alternate gene names: NA

Gene position: 364943-364203 (Counterclockwise)

Preceding gene: 74316366

Following gene: 74316363

Centisome position: 12.54

GC content: 58.03

Gene sequence:

>741_bases
ATGCGCAATTACCAAGTCTATTGGAGATACGTTATGCGCGCCCGCAAGAAAGGCGTCACCCCTACGCGTATGTCGACCAT
CCTCAAGCGGCAAGCAGTGCCGCGCTGCGGTTCCGACTACACGCCGTCGATCCTCGCCACCCCACAGGAGGCGCCCTCCA
TATCCCACGCCTGCACACTCAATTCAAGCAAGCTGGGCCGCGAGGTCCACTGCCTATCACTACCAGAGACAGCTGCGGCC
CTTCTTGCGTTATACGACCCGGCTGTGGTCGATTTGCACGAACAGCGGATGTTAGCCCCATGGCCCACACCTCACCCCCT
GTTTGGATTCCCTGGTATGCACCAAGTCCAGCTACCGCCCATCAGGGGCATGATTGAAGTCGCCGAGCGCCTGGGTTATC
TGAAAATGCTGCCCCGGGTCAGGATCGAGAACCCAGATGTCCCCGGTAGCTCAGACGTGCAGGTATTCCCCTATATCGGT
GACCTTTTGCTGTTCAGGCGCAGAGTGAACGACGATGGACTGTACTGCATCAATTGGTCCATCAAGGATCAAGAAATAGC
CTTCCGCGTCAGGACAGTTCGTCAGCCGGGAAAACAAAGGCCATCCCGCGACAGCCTCCCAGATATGCTGCCCAGGCATG
AGATGGAGGAGGCCTATTACCGAGATGCGGGAACCCGGGCCCGCATTAGCACTCCCAATGCGCGAGTGCTAAAATTCGCC
GCAAGGAGGTCACACGCATGA

Upstream 100 bases:

>100_bases
TGCATGATGTACTGCTGACTCGCACTCTCAGTATCTTCAACGCACCGGCAAAAGTCAAGGTCAATTCGCGCTGATTCAGG
CCGCCTGGCCAGCTTCGGCC

Downstream 100 bases:

>100_bases
CGCAGACAATGTCTTTACCGATTCCCGCCGCCTACAGTCTGGACAGCTACATCCAGACCGTGAGCCACTATCCGATGCTC
AGCCTCGAGGAAGAGCAGAA

Product: transposase, TnsA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRNYQVYWRYVMRARKKGVTPTRMSTILKRQAVPRCGSDYTPSILATPQEAPSISHACTLNSSKLGREVHCLSLPETAAA
LLALYDPAVVDLHEQRMLAPWPTPHPLFGFPGMHQVQLPPIRGMIEVAERLGYLKMLPRVRIENPDVPGSSDVQVFPYIG
DLLLFRRRVNDDGLYCINWSIKDQEIAFRVRTVRQPGKQRPSRDSLPDMLPRHEMEEAYYRDAGTRARISTPNARVLKFA
ARRSHA

Sequences:

>Translated_246_residues
MRNYQVYWRYVMRARKKGVTPTRMSTILKRQAVPRCGSDYTPSILATPQEAPSISHACTLNSSKLGREVHCLSLPETAAA
LLALYDPAVVDLHEQRMLAPWPTPHPLFGFPGMHQVQLPPIRGMIEVAERLGYLKMLPRVRIENPDVPGSSDVQVFPYIG
DLLLFRRRVNDDGLYCINWSIKDQEIAFRVRTVRQPGKQRPSRDSLPDMLPRHEMEEAYYRDAGTRARISTPNARVLKFA
ARRSHA
>Mature_246_residues
MRNYQVYWRYVMRARKKGVTPTRMSTILKRQAVPRCGSDYTPSILATPQEAPSISHACTLNSSKLGREVHCLSLPETAAA
LLALYDPAVVDLHEQRMLAPWPTPHPLFGFPGMHQVQLPPIRGMIEVAERLGYLKMLPRVRIENPDVPGSSDVQVFPYIG
DLLLFRRRVNDDGLYCINWSIKDQEIAFRVRTVRQPGKQRPSRDSLPDMLPRHEMEEAYYRDAGTRARISTPNARVLKFA
ARRSHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28102; Mature: 28102

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYQVYWRYVMRARKKGVTPTRMSTILKRQAVPRCGSDYTPSILATPQEAPSISHACTL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEC
NSSKLGREVHCLSLPETAAALLALYDPAVVDLHEQRMLAPWPTPHPLFGFPGMHQVQLPP
CHHHCCCEEEEEECCHHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCCCCCCCCEEECCC
IRGMIEVAERLGYLKMLPRVRIENPDVPGSSDVQVFPYIGDLLLFRRRVNDDGLYCINWS
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEC
IKDQEIAFRVRTVRQPGKQRPSRDSLPDMLPRHEMEEAYYRDAGTRARISTPNARVLKFA
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHH
ARRSHA
HHHCCC
>Mature Secondary Structure
MRNYQVYWRYVMRARKKGVTPTRMSTILKRQAVPRCGSDYTPSILATPQEAPSISHACTL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEC
NSSKLGREVHCLSLPETAAALLALYDPAVVDLHEQRMLAPWPTPHPLFGFPGMHQVQLPP
CHHHCCCEEEEEECCHHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCCCCCCCCEEECCC
IRGMIEVAERLGYLKMLPRVRIENPDVPGSSDVQVFPYIGDLLLFRRRVNDDGLYCINWS
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEC
IKDQEIAFRVRTVRQPGKQRPSRDSLPDMLPRHEMEEAYYRDAGTRARISTPNARVLKFA
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHH
ARRSHA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA