| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316317
Identifier: 74316317
GI number: 74316317
Start: 321013
End: 321936
Strand: Direct
Name: 74316317
Synonym: Tbd_0299
Alternate gene names: NA
Gene position: 321013-321936 (Clockwise)
Preceding gene: 74316315
Following gene: 74316318
Centisome position: 11.03
GC content: 67.21
Gene sequence:
>924_bases ATGCGTTCGCGCGATTTTTTCGAGAAGGTGGGGAAGACGCTGGCATTCCATGCGCGCCGCGCGCAGCGTCGGGCGCGTGG ACTGCGCTGGGATCTTGCGCCGCGCGCCGCGGTTCGCCCGATCATCGTGATCGGCTGTTCGCGCGCGGGCACCACGCTCG TCTACAAGACGCTGTCCGAATCGCACGAGATCGGCAGCCTGCAGCGCGAGACTCACGATTACTGGGCGAGCCTGCATCCT CCGGCCGCCAAGAACTGGGACACCCATGCCCTCGACGCGGGCGACGCCAGCGCCGCCGAGCGCGCGACAGTCAGCCGCTA CTTCCACACCTGGACCGGACGCGACCGCTGGGTCGACAAGAACAACCAGAACGGCCTCTGCGTGCCCTATCTGCACGCGC TTTTCCCCGACGCGGTGTTCGTCTTCGTCAAGCGTAGCCCGGGCGACAACCTCAATTCGCTGATTGAGGGATGGCGCAAG CCCGACGAATTCGCGACCTGGTCGCGCGAGCTGCCGGCGGAAGTGGCGGTGGAAAACGGCGAACTGCGCGAGTGGTGCTT CTTTCTCGCCGACGGCTGGCGCGACTACCTGAACGCCGCGGTCGAAGACGTCGCGGCCTTCCAGTACGCGGCGATCAACG GCGCGATCCTCGACGCGCGCGCCGCGATCCCGGCAGCGCAATGGGTCGAGGTGTTCTACGAGGATTTTCTGCGCGACCCG CGGGCGACCTTCCGCGGCATCTTCGAGGCCTGTAGCCTGGCTTTCGATGCGCGCCTCGAGGCGCATTGCGCCGCGGTGCT CGACATTCCCTACAACGCGTTCTCCGAAATCCGCCTCGACAAATGGAAGGACGGGCGCAACCGCGAGCGGATCGAGCGCG TGCTGCCGCAGCTGGCGCCGCTGGCGGCGCGGCTCGGCTACTGA
Upstream 100 bases:
>100_bases GGGATAATGGGCGCCAATATAAACGAGCCCGGCAGGTTGGCACGAATCCTGTCGGACCCGTCCGCCTGGACGGGGCATCG GCGACATAAACGGGAGGCGC
Downstream 100 bases:
>100_bases TGGAGTTGCTGGCGTTCGCCCTCGCGGGGCTCGTGCTGCTCTGGGGCGGCGTGCTGCTCGCCTTCGCGCGCCCGCTCGTC GCGCGCTGGCGCGAGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MRSRDFFEKVGKTLAFHARRAQRRARGLRWDLAPRAAVRPIIVIGCSRAGTTLVYKTLSESHEIGSLQRETHDYWASLHP PAAKNWDTHALDAGDASAAERATVSRYFHTWTGRDRWVDKNNQNGLCVPYLHALFPDAVFVFVKRSPGDNLNSLIEGWRK PDEFATWSRELPAEVAVENGELREWCFFLADGWRDYLNAAVEDVAAFQYAAINGAILDARAAIPAAQWVEVFYEDFLRDP RATFRGIFEACSLAFDARLEAHCAAVLDIPYNAFSEIRLDKWKDGRNRERIERVLPQLAPLAARLGY
Sequences:
>Translated_307_residues MRSRDFFEKVGKTLAFHARRAQRRARGLRWDLAPRAAVRPIIVIGCSRAGTTLVYKTLSESHEIGSLQRETHDYWASLHP PAAKNWDTHALDAGDASAAERATVSRYFHTWTGRDRWVDKNNQNGLCVPYLHALFPDAVFVFVKRSPGDNLNSLIEGWRK PDEFATWSRELPAEVAVENGELREWCFFLADGWRDYLNAAVEDVAAFQYAAINGAILDARAAIPAAQWVEVFYEDFLRDP RATFRGIFEACSLAFDARLEAHCAAVLDIPYNAFSEIRLDKWKDGRNRERIERVLPQLAPLAARLGY >Mature_307_residues MRSRDFFEKVGKTLAFHARRAQRRARGLRWDLAPRAAVRPIIVIGCSRAGTTLVYKTLSESHEIGSLQRETHDYWASLHP PAAKNWDTHALDAGDASAAERATVSRYFHTWTGRDRWVDKNNQNGLCVPYLHALFPDAVFVFVKRSPGDNLNSLIEGWRK PDEFATWSRELPAEVAVENGELREWCFFLADGWRDYLNAAVEDVAAFQYAAINGAILDARAAIPAAQWVEVFYEDFLRDP RATFRGIFEACSLAFDARLEAHCAAVLDIPYNAFSEIRLDKWKDGRNRERIERVLPQLAPLAARLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34940; Mature: 34940
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRDFFEKVGKTLAFHARRAQRRARGLRWDLAPRAAVRPIIVIGCSRAGTTLVYKTLSE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHH SHEIGSLQRETHDYWASLHPPAAKNWDTHALDAGDASAAERATVSRYFHTWTGRDRWVDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NNQNGLCVPYLHALFPDAVFVFVKRSPGDNLNSLIEGWRKPDEFATWSRELPAEVAVENG CCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHEECCC ELREWCFFLADGWRDYLNAAVEDVAAFQYAAINGAILDARAAIPAAQWVEVFYEDFLRDP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCH RATFRGIFEACSLAFDARLEAHCAAVLDIPYNAFSEIRLDKWKDGRNRERIERVLPQLAP HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAARLGY HHHHHCC >Mature Secondary Structure MRSRDFFEKVGKTLAFHARRAQRRARGLRWDLAPRAAVRPIIVIGCSRAGTTLVYKTLSE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHH SHEIGSLQRETHDYWASLHPPAAKNWDTHALDAGDASAAERATVSRYFHTWTGRDRWVDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NNQNGLCVPYLHALFPDAVFVFVKRSPGDNLNSLIEGWRKPDEFATWSRELPAEVAVENG CCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHEECCC ELREWCFFLADGWRDYLNAAVEDVAAFQYAAINGAILDARAAIPAAQWVEVFYEDFLRDP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCH RATFRGIFEACSLAFDARLEAHCAAVLDIPYNAFSEIRLDKWKDGRNRERIERVLPQLAP HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAARLGY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA