| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316318
Identifier: 74316318
GI number: 74316318
Start: 321936
End: 323129
Strand: Direct
Name: 74316318
Synonym: Tbd_0300
Alternate gene names: NA
Gene position: 321936-323129 (Clockwise)
Preceding gene: 74316317
Following gene: 74316319
Centisome position: 11.06
GC content: 75.96
Gene sequence:
>1194_bases ATGGAGTTGCTGGCGTTCGCCCTCGCGGGGCTCGTGCTGCTCTGGGGCGGCGTGCTGCTCGCCTTCGCGCGCCCGCTCGT CGCGCGCTGGCGCGAGCCGGTGCTGCGCCAGCCCGTGCTCGTGATCGAGAGCGACGACTGGGGCGCCGGGCCGCTCGAAC AGGCCGACGCGCTGCAGGCGCTCGCGTCCCTGCTGCGGCGCGTGCACGACCGGAGCGGTCGCCGTGCGCTGATGACGCTC GGCGTCGTGCTCGAAGTGCCGGACGGCCCGCGCGTCGCCGCCAGCGGATGTCGCGAATATCACGCGTGCACGCTCGCCGA CGCCCGTTTCGCGGCGGTGCGGCAGGCGATCCAGGCCGGCGTCGCCGACGGCGTCTTCGTCCCGCAGTTGCACGGCCAGT GTCATTACTGGCCGCCGGCGCTGCTGGCCGCGGCGCGCCTCGACGAGGGGGTGCGCGCCTGGCTCACCGCAGCCGAGCCC GGGCCGACCGAAGTCCTGCCCGCCGCGCTGCAGACCCGCTGGGTCGACGCCGCGCGCCTGCCCGCGGCAGCGCTTCCGGC GGCGGCCATCGCAGCCGCGGTCGCCGAAGAGTGCGCGAACTACGCGTCGATCTTCGGGACGCCGCCGAAGGTCGCGGTCG CGACGACCTTCGTCTGGACCGAAGCCGTCGAAGAGGCCTGGGCACGCTGCGGGGTCGAGGCCGTCGTGAGCCCCGGCGCA CGCGCAACCGGCCGCGACGCGCAAGGCCGGCCGGCCGGCGTCGACCGGGCGATGCTGAGCGGGCAACGCGCCCGCGCGGG CCAGATCTATCTCGTGCGCGACGTGTACTTCGAACCGGTGCGCGGGCACGCCCCGCAGCAGCTCGTCGCCGGCCTGCTCG CGCGCGCTCGCCAGGGAAGGGCCTGCCTCGTGGAGACGCACCGCTTCAATTTCCTGCAGGCGCGCGATGCGAGCCTCGCC GCGCTCGAAGCCGGCCTTGCCGCCGCGCTTGCGGCGTGCCCGGCGCTGCGCTTCGCGACGCCGCTCGAACTTGCCCGCGC GCTGCGCGAGCGCGACCCGGCCTGGGTCGACACCCGCTGGCGGCCGCGACTCGCGGCGTGGCGCGCGCGCCTCGACGAGA TCCCGCGCTTTCGCCGGGCCGCGCGGCTGAGCGGGCTGCAGTTTCCGCTGGCCTTGCTGCGAGGCGAGCGGTGA
Upstream 100 bases:
>100_bases CCGAAATCCGCCTCGACAAATGGAAGGACGGGCGCAACCGCGAGCGGATCGAGCGCGTGCTGCCGCAGCTGGCGCCGCTG GCGGCGCGGCTCGGCTACTG
Downstream 100 bases:
>100_bases CGCCGCGCTTTTCGGTCGTCATTCCGGCGTACAACGCCGCGGCGACGCTCGCGCGCGCGATCGAATCGGTGCGCGCGCAG AGCTGGCCCGCGCACGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MELLAFALAGLVLLWGGVLLAFARPLVARWREPVLRQPVLVIESDDWGAGPLEQADALQALASLLRRVHDRSGRRALMTL GVVLEVPDGPRVAASGCREYHACTLADARFAAVRQAIQAGVADGVFVPQLHGQCHYWPPALLAAARLDEGVRAWLTAAEP GPTEVLPAALQTRWVDAARLPAAALPAAAIAAAVAEECANYASIFGTPPKVAVATTFVWTEAVEEAWARCGVEAVVSPGA RATGRDAQGRPAGVDRAMLSGQRARAGQIYLVRDVYFEPVRGHAPQQLVAGLLARARQGRACLVETHRFNFLQARDASLA ALEAGLAAALAACPALRFATPLELARALRERDPAWVDTRWRPRLAAWRARLDEIPRFRRAARLSGLQFPLALLRGER
Sequences:
>Translated_397_residues MELLAFALAGLVLLWGGVLLAFARPLVARWREPVLRQPVLVIESDDWGAGPLEQADALQALASLLRRVHDRSGRRALMTL GVVLEVPDGPRVAASGCREYHACTLADARFAAVRQAIQAGVADGVFVPQLHGQCHYWPPALLAAARLDEGVRAWLTAAEP GPTEVLPAALQTRWVDAARLPAAALPAAAIAAAVAEECANYASIFGTPPKVAVATTFVWTEAVEEAWARCGVEAVVSPGA RATGRDAQGRPAGVDRAMLSGQRARAGQIYLVRDVYFEPVRGHAPQQLVAGLLARARQGRACLVETHRFNFLQARDASLA ALEAGLAAALAACPALRFATPLELARALRERDPAWVDTRWRPRLAAWRARLDEIPRFRRAARLSGLQFPLALLRGER >Mature_397_residues MELLAFALAGLVLLWGGVLLAFARPLVARWREPVLRQPVLVIESDDWGAGPLEQADALQALASLLRRVHDRSGRRALMTL GVVLEVPDGPRVAASGCREYHACTLADARFAAVRQAIQAGVADGVFVPQLHGQCHYWPPALLAAARLDEGVRAWLTAAEP GPTEVLPAALQTRWVDAARLPAAALPAAAIAAAVAEECANYASIFGTPPKVAVATTFVWTEAVEEAWARCGVEAVVSPGA RATGRDAQGRPAGVDRAMLSGQRARAGQIYLVRDVYFEPVRGHAPQQLVAGLLARARQGRACLVETHRFNFLQARDASLA ALEAGLAAALAACPALRFATPLELARALRERDPAWVDTRWRPRLAAWRARLDEIPRFRRAARLSGLQFPLALLRGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42773; Mature: 42773
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLAFALAGLVLLWGGVLLAFARPLVARWREPVLRQPVLVIESDDWGAGPLEQADALQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH LASLLRRVHDRSGRRALMTLGVVLEVPDGPRVAASGCREYHACTLADARFAAVRQAIQAG HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VADGVFVPQLHGQCHYWPPALLAAARLDEGVRAWLTAAEPGPTEVLPAALQTRWVDAARL CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PAAALPAAAIAAAVAEECANYASIFGTPPKVAVATTFVWTEAVEEAWARCGVEAVVSPGA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC RATGRDAQGRPAGVDRAMLSGQRARAGQIYLVRDVYFEPVRGHAPQQLVAGLLARARQGR CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHCCCC ACLVETHRFNFLQARDASLAALEAGLAAALAACPALRFATPLELARALRERDPAWVDTRW EEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC RPRLAAWRARLDEIPRFRRAARLSGLQFPLALLRGER CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MELLAFALAGLVLLWGGVLLAFARPLVARWREPVLRQPVLVIESDDWGAGPLEQADALQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH LASLLRRVHDRSGRRALMTLGVVLEVPDGPRVAASGCREYHACTLADARFAAVRQAIQAG HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VADGVFVPQLHGQCHYWPPALLAAARLDEGVRAWLTAAEPGPTEVLPAALQTRWVDAARL CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PAAALPAAAIAAAVAEECANYASIFGTPPKVAVATTFVWTEAVEEAWARCGVEAVVSPGA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC RATGRDAQGRPAGVDRAMLSGQRARAGQIYLVRDVYFEPVRGHAPQQLVAGLLARARQGR CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHCCCC ACLVETHRFNFLQARDASLAALEAGLAAALAACPALRFATPLELARALRERDPAWVDTRW EEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC RPRLAAWRARLDEIPRFRRAARLSGLQFPLALLRGER CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA