| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316306
Identifier: 74316306
GI number: 74316306
Start: 305918
End: 306982
Strand: Direct
Name: 74316306
Synonym: Tbd_0288
Alternate gene names: NA
Gene position: 305918-306982 (Clockwise)
Preceding gene: 74316305
Following gene: 74316307
Centisome position: 10.51
GC content: 65.92
Gene sequence:
>1065_bases GTGAACAGCCGCGCGCAACCCTTCGTGCACGAGGCAGCCGCGCTCTCGGTACGCACCCTCGACGCGGCCGAAGCCGCGCG CTGGGACACCTACGTCGCGGCGCATCCGGGCGCGACCTTCTTCCATCGTGCCGGCTGGAAGCGCGTGATCGAGGACGCCT TCGCGCACCGGACGCATTTCCTGCTCGCCGAGCGCGCGGGGGAAATCGTCGGCGTGCTGCCGCTGGCCGAGATCAAGAGC CGCCTCTTCGGACACAGCCTGGGCTCGCTGCCGTTCTGCGCCTACGGCGGCATTCTTGCCGACGACGACGAAGCGGCGCG CGCGCTCGATGCCGCGGCGCAGGCGCTCGCGACGCGGCTCGGCGTCGGCGCGCTCGAATACCGCAACCAGGTCGCGCAGC ATCCCGACTGGCCGACCAAGGATCTCTACGTCACGTTCAAGAAGGCGATCGCGCCCGAGGTCGAGGCGAACATGAACGCG ATCCCTCGCAAACAGCGCGCGATGGTGCGAAAGGGCATCAAGGCAGGTCTCGTCGGCGAGATCGACGGCGATACGAGGCG CTTCTTCGAGGCCTATTCGGCGAGCGTGCACCGCCTCGGTACGCCGGTCTTTTCGCGCCGCTTCTTTCGGCTGCTCAAGG ACGCGTTCGGCGACGATTGCGAAGTGCTGACGATCACGCTCAAGGGTGAGGTGATCGCGAGCGTGATCTCGTTCTATTTC CGCGACGAAGTGCTGCCGTATTACGGCGGCGGCACCGACGCCGCGCGTGCCGTCGCCGGCAACGACTTCATGTACTGGGA CCTGATGCGCCGGGCCTGCGAACGTGGGCTCAAGGTCTTCGACTTCGGTCGCAGCAAGCGCGGCACCGGCGCCTTCGATT TCAAGAAGAACTGGGGCTTCGAGCCGACGCCGCTGCATTACGAGTATTTCCTCGTCGCGGATTCGACCGTTCCCGAGATC AACCCGCTCAATCCGAAATACCGTCTTTTCATCGAGGCCTGGAAGCGGATGCCGCGTGCGCTCGCCAACGCGATCGGCCC CCATATCGTGAAGAACCTGGGCTAG
Upstream 100 bases:
>100_bases TCCGCCACTACGTCAATCTACAGCGCACCGCGGGCCGCCTGCGCCGCCTGCTGAACGACTTCGAATGGGACCGCGTTGAC CGCGTGTTCCTTGGCGAGCC
Downstream 100 bases:
>100_bases GTACATGGACGGCCTGTTGTTCCTCGCGCACCGCATCCCGTTTCCGCCCAACAAGGGCGACAAGATCCGTTCCTTCCATC TGCTGCGTCATCTGAGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNSRAQPFVHEAAALSVRTLDAAEAARWDTYVAAHPGATFFHRAGWKRVIEDAFAHRTHFLLAERAGEIVGVLPLAEIKS RLFGHSLGSLPFCAYGGILADDDEAARALDAAAQALATRLGVGALEYRNQVAQHPDWPTKDLYVTFKKAIAPEVEANMNA IPRKQRAMVRKGIKAGLVGEIDGDTRRFFEAYSASVHRLGTPVFSRRFFRLLKDAFGDDCEVLTITLKGEVIASVISFYF RDEVLPYYGGGTDAARAVAGNDFMYWDLMRRACERGLKVFDFGRSKRGTGAFDFKKNWGFEPTPLHYEYFLVADSTVPEI NPLNPKYRLFIEAWKRMPRALANAIGPHIVKNLG
Sequences:
>Translated_354_residues MNSRAQPFVHEAAALSVRTLDAAEAARWDTYVAAHPGATFFHRAGWKRVIEDAFAHRTHFLLAERAGEIVGVLPLAEIKS RLFGHSLGSLPFCAYGGILADDDEAARALDAAAQALATRLGVGALEYRNQVAQHPDWPTKDLYVTFKKAIAPEVEANMNA IPRKQRAMVRKGIKAGLVGEIDGDTRRFFEAYSASVHRLGTPVFSRRFFRLLKDAFGDDCEVLTITLKGEVIASVISFYF RDEVLPYYGGGTDAARAVAGNDFMYWDLMRRACERGLKVFDFGRSKRGTGAFDFKKNWGFEPTPLHYEYFLVADSTVPEI NPLNPKYRLFIEAWKRMPRALANAIGPHIVKNLG >Mature_354_residues MNSRAQPFVHEAAALSVRTLDAAEAARWDTYVAAHPGATFFHRAGWKRVIEDAFAHRTHFLLAERAGEIVGVLPLAEIKS RLFGHSLGSLPFCAYGGILADDDEAARALDAAAQALATRLGVGALEYRNQVAQHPDWPTKDLYVTFKKAIAPEVEANMNA IPRKQRAMVRKGIKAGLVGEIDGDTRRFFEAYSASVHRLGTPVFSRRFFRLLKDAFGDDCEVLTITLKGEVIASVISFYF RDEVLPYYGGGTDAARAVAGNDFMYWDLMRRACERGLKVFDFGRSKRGTGAFDFKKNWGFEPTPLHYEYFLVADSTVPEI NPLNPKYRLFIEAWKRMPRALANAIGPHIVKNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39476; Mature: 39476
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRAQPFVHEAAALSVRTLDAAEAARWDTYVAAHPGATFFHRAGWKRVIEDAFAHRTHF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LLAERAGEIVGVLPLAEIKSRLFGHSLGSLPFCAYGGILADDDEAARALDAAAQALATRL HHHHHCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCEECCCHHHHHHHHHHHHHHHHHH GVGALEYRNQVAQHPDWPTKDLYVTFKKAIAPEVEANMNAIPRKQRAMVRKGIKAGLVGE CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCC IDGDTRRFFEAYSASVHRLGTPVFSRRFFRLLKDAFGDDCEVLTITLKGEVIASVISFYF CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH RDEVLPYYGGGTDAARAVAGNDFMYWDLMRRACERGLKVFDFGRSKRGTGAFDFKKNWGF HHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC EPTPLHYEYFLVADSTVPEINPLNPKYRLFIEAWKRMPRALANAIGPHIVKNLG CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSRAQPFVHEAAALSVRTLDAAEAARWDTYVAAHPGATFFHRAGWKRVIEDAFAHRTHF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LLAERAGEIVGVLPLAEIKSRLFGHSLGSLPFCAYGGILADDDEAARALDAAAQALATRL HHHHHCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCEECCCHHHHHHHHHHHHHHHHHH GVGALEYRNQVAQHPDWPTKDLYVTFKKAIAPEVEANMNAIPRKQRAMVRKGIKAGLVGE CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCC IDGDTRRFFEAYSASVHRLGTPVFSRRFFRLLKDAFGDDCEVLTITLKGEVIASVISFYF CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH RDEVLPYYGGGTDAARAVAGNDFMYWDLMRRACERGLKVFDFGRSKRGTGAFDFKKNWGF HHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC EPTPLHYEYFLVADSTVPEINPLNPKYRLFIEAWKRMPRALANAIGPHIVKNLG CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA