Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316307

Identifier: 74316307

GI number: 74316307

Start: 306987

End: 308207

Strand: Direct

Name: 74316307

Synonym: Tbd_0289

Alternate gene names: NA

Gene position: 306987-308207 (Clockwise)

Preceding gene: 74316306

Following gene: 74316308

Centisome position: 10.55

GC content: 70.84

Gene sequence:

>1221_bases
ATGGACGGCCTGTTGTTCCTCGCGCACCGCATCCCGTTTCCGCCCAACAAGGGCGACAAGATCCGTTCCTTCCATCTGCT
GCGTCATCTGAGTACGCGTCACGCGATCCACCTCGGCGCCTTCGTCGACGACCCCGACGACTGGCAATACCGGGACGCGC
TGAAACCCTATTGCGCGTCGATCAAGCTCGTTCCGCTGCATCCGCGTCGCGCCCGCCTGCGCAGCGTGAGTGGACTCCTG
ACAGGCGAGGCGCTGACGCTGCCGTATTACCGCAGTGCTGCGCTCGCGCGCTGGGCCGAAGCGCTGGCGCGCGAGGGCAC
GGTCACCGGCGGGCTCGCGTTCTCCTCGGCGATGGCGCAAAGCATGCCGCCGACGCTTGCGCGGCGCGTGCTCGACATGG
TCGACGTCGACTCCGACAAATGGGCGCAGTACGCGCCGACCCGGCGCTGGCCGCTGTCGTGCATCTACGCACGCGAGGCG
CGCAAGCTCGCGGCGTGGGAAGCCCGCGTCGCCGAGACATTCGACGCCACGCTGCTCGTCTCGCCCGAGGAAGCGCGCCT
GCTGCAGCAGCGCGCGCCGGCCGCGCGCGACCGGATCGCGGCCTTCGAGAACGGCGTCGACGCCGATTATTTTTCGCCCG
AGCGCGATTATCCGAATCCGTATGCCGCCGACGTGCGCGCCGTGGTATTCACGGGCGCGATGGATTACTGGCCGAACGTC
GACGCGGTGACCTGGTTCGCCGAGCATGTTTTCCCGGCCGTCCGCGAGGCCGTGCCGACGGCGCAATTCACCATCGTCGG
CAGCCGCCCGAGCGACGCCGTGCATGCGCTCGGCCGCCGGCCCGGCGTCGTGGTCACCGGCAGCGTCGCCGACGTGCGGC
CGTGGATCGCCCACGCGGCGTGTGCGGTCGCGCCGCTGCGCATCGCCCGCGGCGTGCAGAACAAGGTGCTCGAGGCGATG
GCGATGGCGCGCCCGGTCGTCGTGACGCCGCAGGCGGCCGAAGGTATCCGCGGCGCACCCGGCCGCGAGTTCGATCTCGC
GCTCGACGAGCCGGGGCTCGTGCGCAGCGTCGTCGCCCGCCTGCTTTCGCCGGCTGCGAACCTGCTCGGGCGCGACTGCA
TCCTCGCCCGCTACGACTGGGGCCGCAACGTCGCTGCCGTCGATGCCTTGTTCACGGCGCCGCCCGCCGTCCTGCCTGAC
TCGGAGACCTGCCCCGCATGA

Upstream 100 bases:

>100_bases
AATCCGAAATACCGTCTTTTCATCGAGGCCTGGAAGCGGATGCCGCGTGCGCTCGCCAACGCGATCGGCCCCCATATCGT
GAAGAACCTGGGCTAGGTAC

Downstream 100 bases:

>100_bases
GCGCCGTGCCCGATTCCCTGCCTGCCGTGCGACCCCATGCCTGGGCGTCGGTGGCGGCGCTGACCCTCGGCGTCGCCGTG
ATCGTCGCGGGCATGTTCTG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Glycosyltransferase-Like Protein; Sugar Transferase; A-Glycosyltransferase; Mannosyl Transferase WbaD; Glycosyl Transferase Protein; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Polysaccharide Biosynthesis Protein; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDGLLFLAHRIPFPPNKGDKIRSFHLLRHLSTRHAIHLGAFVDDPDDWQYRDALKPYCASIKLVPLHPRRARLRSVSGLL
TGEALTLPYYRSAALARWAEALAREGTVTGGLAFSSAMAQSMPPTLARRVLDMVDVDSDKWAQYAPTRRWPLSCIYAREA
RKLAAWEARVAETFDATLLVSPEEARLLQQRAPAARDRIAAFENGVDADYFSPERDYPNPYAADVRAVVFTGAMDYWPNV
DAVTWFAEHVFPAVREAVPTAQFTIVGSRPSDAVHALGRRPGVVVTGSVADVRPWIAHAACAVAPLRIARGVQNKVLEAM
AMARPVVVTPQAAEGIRGAPGREFDLALDEPGLVRSVVARLLSPAANLLGRDCILARYDWGRNVAAVDALFTAPPAVLPD
SETCPA

Sequences:

>Translated_406_residues
MDGLLFLAHRIPFPPNKGDKIRSFHLLRHLSTRHAIHLGAFVDDPDDWQYRDALKPYCASIKLVPLHPRRARLRSVSGLL
TGEALTLPYYRSAALARWAEALAREGTVTGGLAFSSAMAQSMPPTLARRVLDMVDVDSDKWAQYAPTRRWPLSCIYAREA
RKLAAWEARVAETFDATLLVSPEEARLLQQRAPAARDRIAAFENGVDADYFSPERDYPNPYAADVRAVVFTGAMDYWPNV
DAVTWFAEHVFPAVREAVPTAQFTIVGSRPSDAVHALGRRPGVVVTGSVADVRPWIAHAACAVAPLRIARGVQNKVLEAM
AMARPVVVTPQAAEGIRGAPGREFDLALDEPGLVRSVVARLLSPAANLLGRDCILARYDWGRNVAAVDALFTAPPAVLPD
SETCPA
>Mature_406_residues
MDGLLFLAHRIPFPPNKGDKIRSFHLLRHLSTRHAIHLGAFVDDPDDWQYRDALKPYCASIKLVPLHPRRARLRSVSGLL
TGEALTLPYYRSAALARWAEALAREGTVTGGLAFSSAMAQSMPPTLARRVLDMVDVDSDKWAQYAPTRRWPLSCIYAREA
RKLAAWEARVAETFDATLLVSPEEARLLQQRAPAARDRIAAFENGVDADYFSPERDYPNPYAADVRAVVFTGAMDYWPNV
DAVTWFAEHVFPAVREAVPTAQFTIVGSRPSDAVHALGRRPGVVVTGSVADVRPWIAHAACAVAPLRIARGVQNKVLEAM
AMARPVVVTPQAAEGIRGAPGREFDLALDEPGLVRSVVARLLSPAANLLGRDCILARYDWGRNVAAVDALFTAPPAVLPD
SETCPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44424; Mature: 44424

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLLFLAHRIPFPPNKGDKIRSFHLLRHLSTRHAIHLGAFVDDPDDWQYRDALKPYCAS
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCC
IKLVPLHPRRARLRSVSGLLTGEALTLPYYRSAALARWAEALAREGTVTGGLAFSSAMAQ
EEEEECCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SMPPTLARRVLDMVDVDSDKWAQYAPTRRWPLSCIYAREARKLAAWEARVAETFDATLLV
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SPEEARLLQQRAPAARDRIAAFENGVDADYFSPERDYPNPYAADVRAVVFTGAMDYWPNV
CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEHEEECCHHHCCCC
DAVTWFAEHVFPAVREAVPTAQFTIVGSRPSDAVHALGRRPGVVVTGSVADVRPWIAHAA
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHHHH
CAVAPLRIARGVQNKVLEAMAMARPVVVTPQAAEGIRGAPGREFDLALDEPGLVRSVVAR
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCCCCCCCEEEECCCCHHHHHHHHH
LLSPAANLLGRDCILARYDWGRNVAAVDALFTAPPAVLPDSETCPA
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDGLLFLAHRIPFPPNKGDKIRSFHLLRHLSTRHAIHLGAFVDDPDDWQYRDALKPYCAS
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCC
IKLVPLHPRRARLRSVSGLLTGEALTLPYYRSAALARWAEALAREGTVTGGLAFSSAMAQ
EEEEECCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SMPPTLARRVLDMVDVDSDKWAQYAPTRRWPLSCIYAREARKLAAWEARVAETFDATLLV
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SPEEARLLQQRAPAARDRIAAFENGVDADYFSPERDYPNPYAADVRAVVFTGAMDYWPNV
CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEHEEECCHHHCCCC
DAVTWFAEHVFPAVREAVPTAQFTIVGSRPSDAVHALGRRPGVVVTGSVADVRPWIAHAA
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHHHH
CAVAPLRIARGVQNKVLEAMAMARPVVVTPQAAEGIRGAPGREFDLALDEPGLVRSVVAR
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCCCCCCCEEEECCCCHHHHHHHHH
LLSPAANLLGRDCILARYDWGRNVAAVDALFTAPPAVLPDSETCPA
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA