Click here to switch to the map view.

The map label for this gene is gatC [H]

Identifier: 74316277

GI number: 74316277

Start: 280863

End: 281150

Strand: Reverse

Name: gatC [H]

Synonym: Tbd_0259

Alternate gene names: 74316277

Gene position: 281150-280863 (Counterclockwise)

Preceding gene: 74316290

Following gene: 74316276

Centisome position: 9.66

GC content: 63.89

Gene sequence:

>288_bases
ATGTCCCTCAGTCTGGACGACGTCAAGCGCATCGCCGGTCTTGCGCGCATAGAAATCGACGACGCTGAGGCGCACACGAC
GCAGACCCAGCTCAACACGATTTTCGGCCTGATCGCCGCGATGCAGGCGGTCGACACCGACCAGGTTACGCCGATGGCGC
ATGCGCAGGAGGTCTACCAGCGCCTGCGCGTCGACGCCGTCGACGAGATCGACCGTCACGCCGCATTCCAGGCCGTCGCA
CCGGCGGTCGAAAACGGCCTGTATCTCGTGCCGAAAGTGATCGAGTGA

Upstream 100 bases:

>100_bases
GTGGCTGCGATCCCGGTTCGAACGGATAAAAGGGCAGAAAAAACAAGGGGGCTATGATACCCTAACGGGCTTCGTTCCCG
TAAGTCATCTAGGTGCCTCC

Downstream 100 bases:

>100_bases
GCGTCTCCCATTCCGCCGTGCCGAATCCGTAACGCCATGCCCGCACCCTCCCTTTCCGCCCTCGCTGCACAACTCGCGGC
GAAACAGGTGTCGAGCCGCG

Product: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSLSLDDVKRIAGLARIEIDDAEAHTTQTQLNTIFGLIAAMQAVDTDQVTPMAHAQEVYQRLRVDAVDEIDRHAAFQAVA
PAVENGLYLVPKVIE

Sequences:

>Translated_95_residues
MSLSLDDVKRIAGLARIEIDDAEAHTTQTQLNTIFGLIAAMQAVDTDQVTPMAHAQEVYQRLRVDAVDEIDRHAAFQAVA
PAVENGLYLVPKVIE
>Mature_94_residues
SLSLDDVKRIAGLARIEIDDAEAHTTQTQLNTIFGLIAAMQAVDTDQVTPMAHAQEVYQRLRVDAVDEIDRHAAFQAVAP
AVENGLYLVPKVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 10415; Mature: 10284

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSLDDVKRIAGLARIEIDDAEAHTTQTQLNTIFGLIAAMQAVDTDQVTPMAHAQEVYQ
CCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RLRVDAVDEIDRHAAFQAVAPAVENGLYLVPKVIE
HHCCCHHHHHHHHHHHHHHHHHHHCCEEECCEECC
>Mature Secondary Structure 
SLSLDDVKRIAGLARIEIDDAEAHTTQTQLNTIFGLIAAMQAVDTDQVTPMAHAQEVYQ
CCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RLRVDAVDEIDRHAAFQAVAPAVENGLYLVPKVIE
HHCCCHHHHHHHHHHHHHHHHHHHCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA