| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is ampG4 [H]
Identifier: 74316271
GI number: 74316271
Start: 274448
End: 275836
Strand: Reverse
Name: ampG4 [H]
Synonym: Tbd_0253
Alternate gene names: 74316271
Gene position: 275836-274448 (Counterclockwise)
Preceding gene: 74316272
Following gene: 74316270
Centisome position: 9.48
GC content: 68.03
Gene sequence:
>1389_bases ATGCCCAGCCCCTCCGCCAGCCACCCCTGGCTCGCCGCGCTCAAGGTCTACGCCCACCCGCGTGTTGTCGGCATGCTGTT TCTCGGCTTCTCGGCCGGGCTGCCACTGCTGCTCGTGCTCGGCACGCTGTCGTTCTGGCTCTCGGAGGCCGGGATCGCGC GGGCGACGATCGGGCATCTGTCTTGGGTGGGGCTCGCCTACGGCTTCAAGTTCCTGTGGTCGCCGCTGGTCGACCGGCTG CCGCTGCCGCTGCTGACGGCGCGGCTCGGCCGGCGCCGCGCGTGGCTGTTGCTGTCGCAGGTCTGCATCGCGCTCGCGCT GCTCGGGATGGCGAACACCGATCCGGTCGTGAATCTCACGCACACGGTGTTCTTCGCGCTGGCGGTCGCGTTCGCCTCGG CAACGCAGGACATCGCGCTCGACGCCTACCGCATCGAAGCGGTCGAAACCGAAAAGCAGGGCGCGATGGCCGCAAGCTAT CAGGCCGGCTATCGCATCGCGATGATCACCGCCGGCGCGGGCGCGCTATGGATCGCGGCGAGCGTCGACCCCTCCGAGGC GCACTACGACTTCCGACCCTGGCAGGTCGCCTACAGCGTGATGGCCGCGCTCATGGCGGTCGGCATCCTGACCACGCTGA TCATTCGCGAGCCGGAGCGCGAGGTGCCGCGCGAAACCGGCCTGCGCGAGACGCATGCACGGGACAAGGCCGCAGCGCTC GGCCTGTCGGGCGGTCTGCTGACCGCGGCGGCGTGGTTCTACGGTGCCGTGCTTTCGCCTTTCATCGACTTCATCGAGCG CTACAAGTGGCAGGCGGTGCTGATGCTCGCGCTGATCGCGGTCTACCGCATTTCCGACGTCGTGATGGGAGTCATGAGCA ACCCCTTCTATCAGGAGATGGGCTTCACCAAGGACGAGGTCGCGACCGTGTCGAAGGTCTACGGCGTCGTCATGACGATC GCGGGTGCGGCGCTCGGCGGCCTGCTGACGATGCGGCTCGGCGTGATGCGCACGCTGTTTCTCGGCGCCGTGCTCTCGGC CGCGACCAACCTTCTGTTCGTGTGGCTCGCCGGGCGCGGCCACGACATGGGCGCGCTCGTGTTCACGGTGTCGGCCGACA ATCTCTCGGCCGGCATCGCGTCCTCGGCCTTCGTCGCCTACCTCTCGGGGCTCGTCAACCAGGCGTATTCGGCGACGCAG TACGCGCTCTTCACCTCGGTAATGCTGCTCCTGCCCAAGTTCATCGCCGGCTTTTCGGGTGAATTCGTCGACGCCTACGG CTGGGCGAACTTCTTCACCGGCACCGCGCTCGTCGGCGTGCCGGTACTGTTGCTGATCTGGCTGGTCGCGCGCAGCCGCC CCGCGGCCGAAGGCGCGCAGCGTCCATGA
Upstream 100 bases:
>100_bases CGCTCGGCTTTCGTGTACAAGGAACAGCGGTTTTCCGACCACGCCCCGCTGGTCGTCGATTACGACCATGCGCTGTAGCT GAACACAGACCGACGCAACC
Downstream 100 bases:
>100_bases TCGAGTTTTCCCTGTTGAGCGCACTGCTCGCCGGGCTGCTCGGCGGCGTCCACTGCGTCGGCATGTGCGGCGGCATCGTC GCCGCGTTTTCCTTCCGCGC
Product: putative transport transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MPSPSASHPWLAALKVYAHPRVVGMLFLGFSAGLPLLLVLGTLSFWLSEAGIARATIGHLSWVGLAYGFKFLWSPLVDRL PLPLLTARLGRRRAWLLLSQVCIALALLGMANTDPVVNLTHTVFFALAVAFASATQDIALDAYRIEAVETEKQGAMAASY QAGYRIAMITAGAGALWIAASVDPSEAHYDFRPWQVAYSVMAALMAVGILTTLIIREPEREVPRETGLRETHARDKAAAL GLSGGLLTAAAWFYGAVLSPFIDFIERYKWQAVLMLALIAVYRISDVVMGVMSNPFYQEMGFTKDEVATVSKVYGVVMTI AGAALGGLLTMRLGVMRTLFLGAVLSAATNLLFVWLAGRGHDMGALVFTVSADNLSAGIASSAFVAYLSGLVNQAYSATQ YALFTSVMLLLPKFIAGFSGEFVDAYGWANFFTGTALVGVPVLLLIWLVARSRPAAEGAQRP
Sequences:
>Translated_462_residues MPSPSASHPWLAALKVYAHPRVVGMLFLGFSAGLPLLLVLGTLSFWLSEAGIARATIGHLSWVGLAYGFKFLWSPLVDRL PLPLLTARLGRRRAWLLLSQVCIALALLGMANTDPVVNLTHTVFFALAVAFASATQDIALDAYRIEAVETEKQGAMAASY QAGYRIAMITAGAGALWIAASVDPSEAHYDFRPWQVAYSVMAALMAVGILTTLIIREPEREVPRETGLRETHARDKAAAL GLSGGLLTAAAWFYGAVLSPFIDFIERYKWQAVLMLALIAVYRISDVVMGVMSNPFYQEMGFTKDEVATVSKVYGVVMTI AGAALGGLLTMRLGVMRTLFLGAVLSAATNLLFVWLAGRGHDMGALVFTVSADNLSAGIASSAFVAYLSGLVNQAYSATQ YALFTSVMLLLPKFIAGFSGEFVDAYGWANFFTGTALVGVPVLLLIWLVARSRPAAEGAQRP >Mature_461_residues PSPSASHPWLAALKVYAHPRVVGMLFLGFSAGLPLLLVLGTLSFWLSEAGIARATIGHLSWVGLAYGFKFLWSPLVDRLP LPLLTARLGRRRAWLLLSQVCIALALLGMANTDPVVNLTHTVFFALAVAFASATQDIALDAYRIEAVETEKQGAMAASYQ AGYRIAMITAGAGALWIAASVDPSEAHYDFRPWQVAYSVMAALMAVGILTTLIIREPEREVPRETGLRETHARDKAAALG LSGGLLTAAAWFYGAVLSPFIDFIERYKWQAVLMLALIAVYRISDVVMGVMSNPFYQEMGFTKDEVATVSKVYGVVMTIA GAALGGLLTMRLGVMRTLFLGAVLSAATNLLFVWLAGRGHDMGALVFTVSADNLSAGIASSAFVAYLSGLVNQAYSATQY ALFTSVMLLLPKFIAGFSGEFVDAYGWANFFTGTALVGVPVLLLIWLVARSRPAAEGAQRP
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=444, Percent_Identity=35.8108108108108, Blast_Score=233, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49571; Mature: 49440
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPSASHPWLAALKVYAHPRVVGMLFLGFSAGLPLLLVLGTLSFWLSEAGIARATIGHL CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH SWVGLAYGFKFLWSPLVDRLPLPLLTARLGRRRAWLLLSQVCIALALLGMANTDPVVNLT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH HTVFFALAVAFASATQDIALDAYRIEAVETEKQGAMAASYQAGYRIAMITAGAGALWIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEE SVDPSEAHYDFRPWQVAYSVMAALMAVGILTTLIIREPEREVPRETGLRETHARDKAAAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCHHHHHHHHHHHH GLSGGLLTAAAWFYGAVLSPFIDFIERYKWQAVLMLALIAVYRISDVVMGVMSNPFYQEM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GFTKDEVATVSKVYGVVMTIAGAALGGLLTMRLGVMRTLFLGAVLSAATNLLFVWLAGRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC HDMGALVFTVSADNLSAGIASSAFVAYLSGLVNQAYSATQYALFTSVMLLLPKFIAGFSG CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EFVDAYGWANFFTGTALVGVPVLLLIWLVARSRPAAEGAQRP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PSPSASHPWLAALKVYAHPRVVGMLFLGFSAGLPLLLVLGTLSFWLSEAGIARATIGHL CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH SWVGLAYGFKFLWSPLVDRLPLPLLTARLGRRRAWLLLSQVCIALALLGMANTDPVVNLT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH HTVFFALAVAFASATQDIALDAYRIEAVETEKQGAMAASYQAGYRIAMITAGAGALWIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCEEEEEE SVDPSEAHYDFRPWQVAYSVMAALMAVGILTTLIIREPEREVPRETGLRETHARDKAAAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCHHHHHHHHHHHH GLSGGLLTAAAWFYGAVLSPFIDFIERYKWQAVLMLALIAVYRISDVVMGVMSNPFYQEM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GFTKDEVATVSKVYGVVMTIAGAALGGLLTMRLGVMRTLFLGAVLSAATNLLFVWLAGRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC HDMGALVFTVSADNLSAGIASSAFVAYLSGLVNQAYSATQYALFTSVMLLLPKFIAGFSG CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EFVDAYGWANFFTGTALVGVPVLLLIWLVARSRPAAEGAQRP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA