Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316270

Identifier: 74316270

GI number: 74316270

Start: 273780

End: 274451

Strand: Reverse

Name: 74316270

Synonym: Tbd_0252

Alternate gene names: NA

Gene position: 274451-273780 (Counterclockwise)

Preceding gene: 74316271

Following gene: 74316260

Centisome position: 9.43

GC content: 68.3

Gene sequence:

>672_bases
ATGATCGAGTTTTCCCTGTTGAGCGCACTGCTCGCCGGGCTGCTCGGCGGCGTCCACTGCGTCGGCATGTGCGGCGGCAT
CGTCGCCGCGTTTTCCTTCCGCGCCGACGGCAGCACGCCGCCCTTCCGTCTTCATCTCGCCTACAACCTCGGACGCGTGA
CGTCCTACGTGCTGTTCGGCGCGATCGCCGGCGCGCTCGGCGCCTCGCTCAAGCTCGCGAGCTTCCTGCCCGCGCAAACG
ATGCTCTACGTGCTGGCGCAGCTCGTCATGGTGCTGCTCGGTCTCTATCTCGCGGGATTCAATCAGTGGGTGCTGGTGTT
CGAACGCGCCGGCGGCGCGGTCTGGAAACGCGTCAGGCCGCTGTTCCAGAAGCTGTTGCCGGTGAAATCCCTGCCGCAGG
CAGTGCTCGCCGGCATGGCGTGGGGCTGGCTGCCGTGCGGGCTGGTCTATTCGATTCTCGTCTCGGCGCTCGCCGCCGGG
AGCGCGACCTCGGGCGCCGCGCTGATGCTCGCCTTCGGCCTCGGCACCCTGCCGAATCTTCTCGGCATGGGCCTGTTCGC
GCGGCAGATCCAGCCTTTCATGCAGCAGCGCTGGGTGCGGCGCCTCGCCGGCCTGACCGTCGCCGGCTTCGGCGTCTGGG
GGCTCGCTGTCCTGGTGATGCGTTACCTGTAG

Upstream 100 bases:

>100_bases
CGAACTTCTTCACCGGCACCGCGCTCGTCGGCGTGCCGGTACTGTTGCTGATCTGGCTGGTCGCGCGCAGCCGCCCCGCG
GCCGAAGGCGCGCAGCGTCC

Downstream 100 bases:

>100_bases
AAGCTCTGCTCGAAGCTGAGCTCGCGCTTGGGCTCGCCCGCGACCTCGACGGTCGCGTTGAACTTGAGCGTCGCCGGCGG
GCTGACGCGGAATTCTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MIEFSLLSALLAGLLGGVHCVGMCGGIVAAFSFRADGSTPPFRLHLAYNLGRVTSYVLFGAIAGALGASLKLASFLPAQT
MLYVLAQLVMVLLGLYLAGFNQWVLVFERAGGAVWKRVRPLFQKLLPVKSLPQAVLAGMAWGWLPCGLVYSILVSALAAG
SATSGAALMLAFGLGTLPNLLGMGLFARQIQPFMQQRWVRRLAGLTVAGFGVWGLAVLVMRYL

Sequences:

>Translated_223_residues
MIEFSLLSALLAGLLGGVHCVGMCGGIVAAFSFRADGSTPPFRLHLAYNLGRVTSYVLFGAIAGALGASLKLASFLPAQT
MLYVLAQLVMVLLGLYLAGFNQWVLVFERAGGAVWKRVRPLFQKLLPVKSLPQAVLAGMAWGWLPCGLVYSILVSALAAG
SATSGAALMLAFGLGTLPNLLGMGLFARQIQPFMQQRWVRRLAGLTVAGFGVWGLAVLVMRYL
>Mature_223_residues
MIEFSLLSALLAGLLGGVHCVGMCGGIVAAFSFRADGSTPPFRLHLAYNLGRVTSYVLFGAIAGALGASLKLASFLPAQT
MLYVLAQLVMVLLGLYLAGFNQWVLVFERAGGAVWKRVRPLFQKLLPVKSLPQAVLAGMAWGWLPCGLVYSILVSALAAG
SATSGAALMLAFGLGTLPNLLGMGLFARQIQPFMQQRWVRRLAGLTVAGFGVWGLAVLVMRYL

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23661; Mature: 23661

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFSLLSALLAGLLGGVHCVGMCGGIVAAFSFRADGSTPPFRLHLAYNLGRVTSYVLFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
AIAGALGASLKLASFLPAQTMLYVLAQLVMVLLGLYLAGFNQWVLVFERAGGAVWKRVRP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
LFQKLLPVKSLPQAVLAGMAWGWLPCGLVYSILVSALAAGSATSGAALMLAFGLGTLPNL
HHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LGMGLFARQIQPFMQQRWVRRLAGLTVAGFGVWGLAVLVMRYL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIEFSLLSALLAGLLGGVHCVGMCGGIVAAFSFRADGSTPPFRLHLAYNLGRVTSYVLFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
AIAGALGASLKLASFLPAQTMLYVLAQLVMVLLGLYLAGFNQWVLVFERAGGAVWKRVRP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
LFQKLLPVKSLPQAVLAGMAWGWLPCGLVYSILVSALAAGSATSGAALMLAFGLGTLPNL
HHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LGMGLFARQIQPFMQQRWVRRLAGLTVAGFGVWGLAVLVMRYL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA