| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is folE [H]
Identifier: 74316260
GI number: 74316260
Start: 265418
End: 266038
Strand: Reverse
Name: folE [H]
Synonym: Tbd_0242
Alternate gene names: 74316260
Gene position: 266038-265418 (Counterclockwise)
Preceding gene: 74316270
Following gene: 74316256
Centisome position: 9.14
GC content: 66.18
Gene sequence:
>621_bases ATGACTCAGCCTCCTTCCGACACACCCCAGCGGCCCACGCGCGAAGCGGCCGAAGAAGCCGTGCGCACGCTGATCGCCTG GGCCGGCGACGACCCGTCGCGCGAAGGCCTGATCGACACGCCGGCCCGCGTCGTCCGCGCCTACGAGGAATACTTCGCCG GCTATCCCGACGACCCGGCGCAAGTGCTGGCGCGCACGTTTTCCGAAGTCGACGGCTACGACGAAATGATCGTCATGACC GACATCCGTTTCGAAAGCCATTGCGAGCACCACATGGCGCCGATCATCGGCAAGGCCCACGTCGCCTACCTTCCCACGCA CCGCGTCGTCGGCATTTCGAAGCTCGCGCGCCTCGTCGACCTCTACGCCAAGCGCCTGCAGATCCAGGAAAGAATGACCG TGCAGATCGCCGACACGCTCAACAACGTGTTGCAGCCGCAAGGCGTCGCCGTCGTGATTGAGGGCTCGCATCAGTGCATG ACGACGCGCGGTGTGCACAAGCCGGGCGCGGCGATGGTCACGAGCCGCATGCTCGGCGTCTTCCGCTCCAACGTTGCGAC GCGCCGCGAGTTTCTGGCGATGATCGGCCGCACCGGCGCGGGGCCGCTGAGCAATACCTGA
Upstream 100 bases:
>100_bases AGCAGCCTGCCCGCGCGCGCCGAGCGGTTCGGCTATTACAAGAAACAGCACCGCGCCACGCCCCCACCCCCACGGACAAG ACTGCACGCGAAAGGACATC
Downstream 100 bases:
>100_bases GGCATCGTCGGCGCGCACGTCCACGCTTCGGCCGTGCCGCCGTCCGCTGCCCGACTCAATAAAAAGGGGCGCCCTGCAGA GCGCCCCAGACCTCCAGCAG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTQPPSDTPQRPTREAAEEAVRTLIAWAGDDPSREGLIDTPARVVRAYEEYFAGYPDDPAQVLARTFSEVDGYDEMIVMT DIRFESHCEHHMAPIIGKAHVAYLPTHRVVGISKLARLVDLYAKRLQIQERMTVQIADTLNNVLQPQGVAVVIEGSHQCM TTRGVHKPGAAMVTSRMLGVFRSNVATRREFLAMIGRTGAGPLSNT
Sequences:
>Translated_206_residues MTQPPSDTPQRPTREAAEEAVRTLIAWAGDDPSREGLIDTPARVVRAYEEYFAGYPDDPAQVLARTFSEVDGYDEMIVMT DIRFESHCEHHMAPIIGKAHVAYLPTHRVVGISKLARLVDLYAKRLQIQERMTVQIADTLNNVLQPQGVAVVIEGSHQCM TTRGVHKPGAAMVTSRMLGVFRSNVATRREFLAMIGRTGAGPLSNT >Mature_205_residues TQPPSDTPQRPTREAAEEAVRTLIAWAGDDPSREGLIDTPARVVRAYEEYFAGYPDDPAQVLARTFSEVDGYDEMIVMTD IRFESHCEHHMAPIIGKAHVAYLPTHRVVGISKLARLVDLYAKRLQIQERMTVQIADTLNNVLQPQGVAVVIEGSHQCMT TRGVHKPGAAMVTSRMLGVFRSNVATRREFLAMIGRTGAGPLSNT
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=176, Percent_Identity=45.4545454545455, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI4503949, Length=176, Percent_Identity=45.4545454545455, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI66932970, Length=146, Percent_Identity=40.4109589041096, Blast_Score=130, Evalue=5e-31, Organism=Homo sapiens, GI66932972, Length=137, Percent_Identity=42.3357664233577, Blast_Score=128, Evalue=4e-30, Organism=Escherichia coli, GI1788476, Length=198, Percent_Identity=37.8787878787879, Blast_Score=120, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17560486, Length=197, Percent_Identity=42.6395939086294, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=46.6292134831461, Blast_Score=182, Evalue=5e-47, Organism=Drosophila melanogaster, GI24656782, Length=188, Percent_Identity=45.7446808510638, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI24656791, Length=189, Percent_Identity=45.5026455026455, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24656796, Length=189, Percent_Identity=45.5026455026455, Blast_Score=158, Evalue=3e-39,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22770; Mature: 22639
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPSDTPQRPTREAAEEAVRTLIAWAGDDPSREGLIDTPARVVRAYEEYFAGYPDDPA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH QVLARTFSEVDGYDEMIVMTDIRFESHCEHHMAPIIGKAHVAYLPTHRVVGISKLARLVD HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH LYAKRLQIQERMTVQIADTLNNVLQPQGVAVVIEGSHQCMTTRGVHKPGAAMVTSRMLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCHHHHHHHHHHH FRSNVATRREFLAMIGRTGAGPLSNT HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQPPSDTPQRPTREAAEEAVRTLIAWAGDDPSREGLIDTPARVVRAYEEYFAGYPDDPA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH QVLARTFSEVDGYDEMIVMTDIRFESHCEHHMAPIIGKAHVAYLPTHRVVGISKLARLVD HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH LYAKRLQIQERMTVQIADTLNNVLQPQGVAVVIEGSHQCMTTRGVHKPGAAMVTSRMLGV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCHHHHHHHHHHH FRSNVATRREFLAMIGRTGAGPLSNT HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]