| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is metA [H]
Identifier: 74316264
GI number: 74316264
Start: 268846
End: 269895
Strand: Direct
Name: metA [H]
Synonym: Tbd_0246
Alternate gene names: 74316264
Gene position: 268846-269895 (Clockwise)
Preceding gene: 74316263
Following gene: 74316265
Centisome position: 9.24
GC content: 67.62
Gene sequence:
>1050_bases GTGCCGCTCGTCGCGCACAACGCCCTGCCGACCTTCGAGCGCCTGCGCCGCGACGGCATCACGGTGCTGTCGACCGAGCG CGCCGCCAACCAGGAAATCCGCGAATTGCACGTCGGCCTGCTGAACATGATGCCCGACGCCGCGCTCGAAGCGACCGAGC GGCAGTTCTATCGGCTGGTCGGCGAATCGAACCCGATCGCGCAGTTCTACATGCACCCGTTCACGCTCGAGACGCTGCCG CGCGGCGACAAGGCGCGTGCGCATATCGGGCGCCATTACGAAAAATTCGAGGACATCCGCGCCGCCGGCCTCGACGCGCT GATCATCACCGGCGCCAACGTCAGCCACGCCAACCTTGCCGACGAGGCCTTCTGGCAGCCGCTCATCGAGGTCATCGACT GGGCGTGGGACAACGTCACCTCGACGCTGTGCTCGTGCCTCGCGACGCACGCGGTCATGCAGTTCCGCTACGCGCAGACC CGCGTGCTGCAGCCGCGCAAGATCTGGGGAGTGTTCGAGCATCGCGTGACCGACGTCCGCCACCCGCTCGTCGCCGACGT CAACACCCGCTTCGACGTGCCGCACTCACGCTGGAACGACGTCTCGCGCGCACAGTTCGAGGCCGCCGGCGTCAAGGTGC TGGTCGAGAGCGAAGAGGCGGGCGTCCACCTCGCCGTCAGCGGCGACGGGCTGCGCACGGTGTTCTTCCAGGGGCACCCC GAGTACGACACCGTGTCACTGCTGAAGGAATACAAGCGTGACCTGCTGCTCGCCACGACGGGCGCGCTTGCCGAGCCGCC CTTCCCGCGCCGTTATTTCGATCGCAAGGCGCAGGCGTTTCTGGCCGAATTCGCGCGCCGCACGCGTGTCGGCGAGACGC TCGTCTTCCCCGAAGCGGAGGTCGTTCCGCTGCTCGACAATACCTGGCACGACACGGCCGAAGCGGTGATCGGCAACTGG ATCGGCTGCGTCTATCAGGTCACCCATCGCGAACGCGGCCTGCCCTTCATGCCCGGCGTCGACCCCGACAACCCGCTGGG CCTCGCGTGA
Upstream 100 bases:
>100_bases ACGGCTACACGGTGACGTCCGAAGAGGCCGCACAGGTGCGTGACGAGCGCGATTTCCTCGCGCTGCTCGAAGCCGCGATC GCGCGCAAGGGGAGCTGACC
Downstream 100 bases:
>100_bases CCGAGGCCCACGCGCACTTCGACGAAGCGGAGGGCGCCCTCGTCGCCCGCGGCGCCTGGCACGCGGACGCCGCGGCGGCG CTTCCCGACCTTTCCGGCAA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPLVAHNALPTFERLRRDGITVLSTERAANQEIRELHVGLLNMMPDAALEATERQFYRLVGESNPIAQFYMHPFTLETLP RGDKARAHIGRHYEKFEDIRAAGLDALIITGANVSHANLADEAFWQPLIEVIDWAWDNVTSTLCSCLATHAVMQFRYAQT RVLQPRKIWGVFEHRVTDVRHPLVADVNTRFDVPHSRWNDVSRAQFEAAGVKVLVESEEAGVHLAVSGDGLRTVFFQGHP EYDTVSLLKEYKRDLLLATTGALAEPPFPRRYFDRKAQAFLAEFARRTRVGETLVFPEAEVVPLLDNTWHDTAEAVIGNW IGCVYQVTHRERGLPFMPGVDPDNPLGLA
Sequences:
>Translated_349_residues MPLVAHNALPTFERLRRDGITVLSTERAANQEIRELHVGLLNMMPDAALEATERQFYRLVGESNPIAQFYMHPFTLETLP RGDKARAHIGRHYEKFEDIRAAGLDALIITGANVSHANLADEAFWQPLIEVIDWAWDNVTSTLCSCLATHAVMQFRYAQT RVLQPRKIWGVFEHRVTDVRHPLVADVNTRFDVPHSRWNDVSRAQFEAAGVKVLVESEEAGVHLAVSGDGLRTVFFQGHP EYDTVSLLKEYKRDLLLATTGALAEPPFPRRYFDRKAQAFLAEFARRTRVGETLVFPEAEVVPLLDNTWHDTAEAVIGNW IGCVYQVTHRERGLPFMPGVDPDNPLGLA >Mature_348_residues PLVAHNALPTFERLRRDGITVLSTERAANQEIRELHVGLLNMMPDAALEATERQFYRLVGESNPIAQFYMHPFTLETLPR GDKARAHIGRHYEKFEDIRAAGLDALIITGANVSHANLADEAFWQPLIEVIDWAWDNVTSTLCSCLATHAVMQFRYAQTR VLQPRKIWGVFEHRVTDVRHPLVADVNTRFDVPHSRWNDVSRAQFEAAGVKVLVESEEAGVHLAVSGDGLRTVFFQGHPE YDTVSLLKEYKRDLLLATTGALAEPPFPRRYFDRKAQAFLAEFARRTRVGETLVFPEAEVVPLLDNTWHDTAEAVIGNWI GCVYQVTHRERGLPFMPGVDPDNPLGLA
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=274, Percent_Identity=33.9416058394161, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 39428; Mature: 39297
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVAHNALPTFERLRRDGITVLSTERAANQEIRELHVGLLNMMPDAALEATERQFYRLV CCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GESNPIAQFYMHPFTLETLPRGDKARAHIGRHYEKFEDIRAAGLDALIITGANVSHANLA CCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH DEAFWQPLIEVIDWAWDNVTSTLCSCLATHAVMQFRYAQTRVLQPRKIWGVFEHRVTDVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC HPLVADVNTRFDVPHSRWNDVSRAQFEAAGVKVLVESEEAGVHLAVSGDGLRTVFFQGHP CCCEECCCCCCCCCCHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCEEEEEECCCC EYDTVSLLKEYKRDLLLATTGALAEPPFPRRYFDRKAQAFLAEFARRTRVGETLVFPEAE CHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC VVPLLDNTWHDTAEAVIGNWIGCVYQVTHRERGLPFMPGVDPDNPLGLA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLVAHNALPTFERLRRDGITVLSTERAANQEIRELHVGLLNMMPDAALEATERQFYRLV CCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GESNPIAQFYMHPFTLETLPRGDKARAHIGRHYEKFEDIRAAGLDALIITGANVSHANLA CCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH DEAFWQPLIEVIDWAWDNVTSTLCSCLATHAVMQFRYAQTRVLQPRKIWGVFEHRVTDVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC HPLVADVNTRFDVPHSRWNDVSRAQFEAAGVKVLVESEEAGVHLAVSGDGLRTVFFQGHP CCCEECCCCCCCCCCHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCEEEEEECCCC EYDTVSLLKEYKRDLLLATTGALAEPPFPRRYFDRKAQAFLAEFARRTRVGETLVFPEAE CHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC VVPLLDNTWHDTAEAVIGNWIGCVYQVTHRERGLPFMPGVDPDNPLGLA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA