Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 74316265

GI number: 74316265

Start: 269892

End: 270986

Strand: Direct

Name: yrbE [C]

Synonym: Tbd_0247

Alternate gene names: 74316265

Gene position: 269892-270986 (Clockwise)

Preceding gene: 74316264

Following gene: 74316266

Centisome position: 9.28

GC content: 70.87

Gene sequence:

>1095_bases
GTGACCGAGGCCCACGCGCACTTCGACGAAGCGGAGGGCGCCCTCGTCGCCCGCGGCGCCTGGCACGCGGACGCCGCGGC
GGCGCTTCCCGACCTTTCCGGCAAGCGCGTGCGCGTCATCGACGGCGCAGGGGTAACGCATCTCGACACCAACGGCGCCT
GGTTGCTGCTCGCCGCAGCACAGCCCAAGGCCGACGCGCCCGCGCCTGACTTGCGCGACTTCCAGCCGCGGCACCTGAGC
ATGCTGCGGCTCGTCGCCCAGCATCGCGCCGCGACGCCGCCGCTGCCCGCGCCGCGGCAGGAGGGCGTGCTCGCGCTCAC
CGGGCGCGGTGCGCTGACCGTGTGGAGCCACCTCGTCGGCCTGCTCGATTTCGTCGGGCGCCTGGCGCTCGAACTGGCGG
GCCTCGTCGGCCAGCCCGGGCTCTGGCGCTGGCGCGAACTCGCCGCGCAGGTGCGCGACGTGTTCGTCGGCGCGATTCCG
ATCGTCAGCGGCATGATGTTCCTGCTCGGCGTCGTGTTTGCCTACCTGCTCGGCGACCAGGCGCGCCAGTTCGGCGCCAA
CATCTTCGTCGTCGACGGCCTGCTGCTCGCGGTGCTGCGCGAGATTTCCCCGGTCATCGTCGCGGTGCTCGTCGCCGGCC
GCACGGGCGCCGCGATCACGGCCCAGCTCGGGACGATGAAGGTCGCCGAGGAAATCGACGCGATCGCGACGCTCGGCCTG
TCGCCGCTCGCGGTGCTCGTGATTCCGCGCGTCCTTGCGTTGATCGTGGCCATGCCTTTGCTGGTGTTCATCGGCGACAT
CGCCGGCCTCGTCGGCGGCATGCTCGTCGTGCAGCAACAGCTCGCGATCTCGCCGCCCATCTTCCTGGACCGCCTCTACG
ACGTGATCCTGCTGAAGACGCTGATGGTCGGTCTGGGCAAGGCGCCGGTATTCGCGCTCTTCATCGCGCTGATCTCCTGC
CGCATGGGCCTCGCGGTGAGCCGCGACGCGCGCAGCGTCGGCGTCAACACGACGTCGACGGTCGTGCAGAGCCTGGTCGC
GGTCATCATCCTCAACGCGGTCTTCGCCGTGGCCTTCGTGCGGCTGGGGATCTGA

Upstream 100 bases:

>100_bases
TGATCGGCAACTGGATCGGCTGCGTCTATCAGGTCACCCATCGCGAACGCGGCCTGCCCTTCATGCCCGGCGTCGACCCC
GACAACCCGCTGGGCCTCGC

Downstream 100 bases:

>100_bases
TGGACGCGCCCGTGATCGACGTGCGCGACGTCTCCACCACGCTCGGCGGACAGCGCATCCATCGCGGCCTGAGCCTGTCG
GTTCGACGCGGGGAGGTCGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTEAHAHFDEAEGALVARGAWHADAAAALPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQPKADAPAPDLRDFQPRHLS
MLRLVAQHRAATPPLPAPRQEGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGLWRWRELAAQVRDVFVGAIP
IVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLREISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGL
SPLAVLVIPRVLALIVAMPLLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISC
RMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI

Sequences:

>Translated_364_residues
MTEAHAHFDEAEGALVARGAWHADAAAALPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQPKADAPAPDLRDFQPRHLS
MLRLVAQHRAATPPLPAPRQEGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGLWRWRELAAQVRDVFVGAIP
IVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLREISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGL
SPLAVLVIPRVLALIVAMPLLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISC
RMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI
>Mature_363_residues
TEAHAHFDEAEGALVARGAWHADAAAALPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQPKADAPAPDLRDFQPRHLSM
LRLVAQHRAATPPLPAPRQEGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGLWRWRELAAQVRDVFVGAIPI
VSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLREISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLS
PLAVLVIPRVLALIVAMPLLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISCR
MGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=160, Percent_Identity=33.125, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 38257; Mature: 38126

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAHAHFDEAEGALVARGAWHADAAAALPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAA
CCCCCCCCHHCCCCEEECCCCCCHHHHHCCCCCCCEEEEEECCCEEEEECCCCEEEEEEC
QPKADAPAPDLRDFQPRHLSMLRLVAQHRAATPPLPAPRQEGVLALTGRGALTVWSHLVG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
LLDFVGRLALELAGLVGQPGLWRWRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQFGANIFVVDGLLLAVLREISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
SPLAVLVIPRVLALIVAMPLLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMVGLGKAPVFALFIALISCRMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFV
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLGI
HHCC
>Mature Secondary Structure 
TEAHAHFDEAEGALVARGAWHADAAAALPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAA
CCCCCCCHHCCCCEEECCCCCCHHHHHCCCCCCCEEEEEECCCEEEEECCCCEEEEEEC
QPKADAPAPDLRDFQPRHLSMLRLVAQHRAATPPLPAPRQEGVLALTGRGALTVWSHLVG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
LLDFVGRLALELAGLVGQPGLWRWRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQFGANIFVVDGLLLAVLREISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
SPLAVLVIPRVLALIVAMPLLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMVGLGKAPVFALFIALISCRMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFV
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLGI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA