| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yqiC [C]
Identifier: 74316256
GI number: 74316256
Start: 262217
End: 262480
Strand: Reverse
Name: yqiC [C]
Synonym: Tbd_0238
Alternate gene names: 74316256
Gene position: 262480-262217 (Counterclockwise)
Preceding gene: 74316260
Following gene: 74316255
Centisome position: 9.02
GC content: 64.02
Gene sequence:
>264_bases ATGAACCCGAAATTTCCCGATTCCCCTTTCCTCAACGACCTGCTGGCCCGGCTCGGCGAGGTGTTGCGCCAGTCCCCGGC GCAAGACTTCGAGCGAAATCTCAAGGCCGGGGTGACGTCGATGCTGACCAAACTCGATCTGGTGAGCCGCGAGGAGTTCG ACGTGCAGGCCGCGGTGCTCGCGCGCACGCGCGAAAAGCTGGGCCAACTCGAGGCCCGGTTGGCCGATCTGGAAAAACAC GAGCGGCAGGCGGACGAAGGCTGA
Upstream 100 bases:
>100_bases GTGCATCTGCAAAATGCCCTGCACCGTGCCTGTGCCATTGCCCGCTGCACGCGGCGCGCGACGTCGCTTGCTACACTCGC GCATCACACGGAGGTGGCCG
Downstream 100 bases:
>100_bases AGCCGTGGGCGTCGCCGTCGTCAAGAGCCGCGCGCTCGCCGGCATGAACGCGCCGGAGGTTGTCGTCGAGGCGCACCTCG CCAACGGCCTGCCCGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH ERQADEG
Sequences:
>Translated_87_residues MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH ERQADEG >Mature_87_residues MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH ERQADEG
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082201, Length=52, Percent_Identity=55.7692307692308, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9835; Mature: 9835
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVL CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTREKLGQLEARLADLEKHERQADEG HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVL CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTREKLGQLEARLADLEKHERQADEG HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA