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The map label for this gene is ccsB [H]

Identifier: 74316204

GI number: 74316204

Start: 198000

End: 200012

Strand: Reverse

Name: ccsB [H]

Synonym: Tbd_0186

Alternate gene names: 74316204

Gene position: 200012-198000 (Counterclockwise)

Preceding gene: 74316205

Following gene: 74316203

Centisome position: 6.87

GC content: 63.24

Gene sequence:

>2013_bases
ATGCACACCGCTTCCCATTCCTTCGGCAAGGCCTCGTTCGAATTGCTCAGCTCGATGCGCTTCGCCATCAGCCTGCTCTC
CATCCTCGCGGTGGCGTCGATCGTCGGCACGGTGCTCAAGCAGGCCGAGCCTTACAGCAATTACCTGATCCAGTTCGGGC
CGTTCTGGTTCGAGGTCTACAAGAAACTCGGGCTCTACGACGTCTATCACGCAGGCTGGTTTCTCGTCATTCTGACCTTC
CTCGTCGTCTCGACCAGCGTCTGCATCTGGCGCAACGCGCCGAATTTCGTGCGCGAGATGAGGACTTTCCGGGAACACGT
CAGCGAGCAATCGCTCGCCGCTTTCAAGCACAAGCACGAGCGCGCGACGAGCGAGTCGCCGGAAGCGCTCGCCGCGAGCG
CCCAGCGCTATCTCGAAAGCCGTCGTTACCGGGTCAAGACGCTGCAGCGCGAAGACGGCGTGCTGCTCGCCGCCAAGGCC
GGAAGCTGGAACCGGCTCGGCTACCTGCTCGCGCATTCGGCGATCGTGATGATCTGCATCGGCGGGCTCATCGACGGCAA
CCTCGTCTTCAAGGCGCAGCAACTGCTGGGCCTCAAAAAGATCGAGACGCGCGACATTCCGCAGAGCCAGGTGCCGGCGA
TCTCGCGCCTGACGCCGGCCAATCTGTCGTTTCGAGGCAGCGTGCAGATTCCCGAGGGCTCGAGTGCGGATATCGCATTC
CTCAATGTCGCCGACGGCTACCTGGTGCAGGATTTGCCGTTCACGGTCGCGCTCAAGGAATTTCGCATCGAGCATTACAG
CAACGGCCAGCCGAAGAGCTTCGAGAGTGACGTCGAGATTTTTGACCACGCGGGCAACAAACTCCGCGAAGCGACGATCG
CCGTCAACCATCCGCTGATCCACGACGGCATCGCGATCTATCAGGCGAGCTTTGCCGACGGCGGCACGCGGCTGCAATTG
CGCGGATGGAACCTGTTCGCGCCGACGGCCGAATCCTTCCCGGTGCAGGGCACCGTATACCAGAATGCGACGCTGGCGAG
CGACGGCGGCAACTACACGCTCGAGTTCGTCGACTTCCGCCCCTTCAATATCGAAAACCTCGGCGGCGAGACAACGACCC
CGCGGGACACCATGAGCGTCCTCGGCGGAAGCCCGGTCGCCGACGACACGGGGCTTCACAACGTCGGCCCGAGCTTCCAG
TACAAGGTGCGCGACGCCCGCGGCCAGGCCCGGGAATACTCCAACTACATGCTGCCGCTGGAACTCGACGGACGCTGGTA
TTTGATGTCGGGCGTGCGCGAATCGCCGAACGAAGCCTTCCGCTACCTGCGCATGCCGCTCGATCCCGAAGGCAAGATCG
AGACCTTCATGCGCCTGCGCGGCGCATTGCTCGATCCCGCCCAGCACCCGGCGATCACGGCCGCATTTGCGCGCCAGGCC
CTGCCGCAGGAAGCCTGGGGTACCGAGATCGAGGACAAGCTCAAGCTCAGCGCAACGCAGGTTCTCGGGCTGTTTGCGCA
AGGCGGCTTCCAGTCGCTCGGGAGCTTCATCGAAAGCCGCGTCCCCGAAGCCGAACGCGAAAAGGCCGCCGGCACCTATC
TGCGCATCCTCGAACTGGCGGCCTTCGAGGCGTTGAAGATTTCCAACCGCCAGAACGGCCTTGCGGCACCCCAGGCGGAC
GAGGCGGCCGGCTGGCTGGTGCGCGACACGCTCAACAGCATGAGCGACATCTTCGTCTACGGTGCGCCGGTGTACCTGCA
ACTGATGCAATACGACGAGGTCAAGGCCAGCGGGCTGCAACTCACGCGCTCGCCCGGCAAGAACATCGTCTACCTCGGTT
CGCTTTTGCTGACGCTCGGCGTATTCTTCATGCTCTACGTCCGCGAACGCCGCGTCTGGCTGCGCATCAAACCCGGGCAC
GCACTACTCGCGATGTCGTCTGCCAAGCACACCATCGATTTCGAGACGGAATTCGCCGAACACGCCCGCGCGCTGGACGC
GCTCGCCAAATAG

Upstream 100 bases:

>100_bases
CTCGCGCCTTGCGGGTAAACTTATCCGGCTTGCTTAAGTCGATGAAAGGGTGACGCAAGTCACCCTTTTTTTCTTGTAGC
CAACAGGGCCTCGCTGCCTC

Downstream 100 bases:

>100_bases
GCACCGGGCTGCGCATCATTTAGGAGACCCACCATGGAACTCGCTCTCAACCATCCCGCCCCGCTTTTCAAGCGCCTTGC
CTGGTTCGACTGGCTGTTCG

Product: cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MHTASHSFGKASFELLSSMRFAISLLSILAVASIVGTVLKQAEPYSNYLIQFGPFWFEVYKKLGLYDVYHAGWFLVILTF
LVVSTSVCIWRNAPNFVREMRTFREHVSEQSLAAFKHKHERATSESPEALAASAQRYLESRRYRVKTLQREDGVLLAAKA
GSWNRLGYLLAHSAIVMICIGGLIDGNLVFKAQQLLGLKKIETRDIPQSQVPAISRLTPANLSFRGSVQIPEGSSADIAF
LNVADGYLVQDLPFTVALKEFRIEHYSNGQPKSFESDVEIFDHAGNKLREATIAVNHPLIHDGIAIYQASFADGGTRLQL
RGWNLFAPTAESFPVQGTVYQNATLASDGGNYTLEFVDFRPFNIENLGGETTTPRDTMSVLGGSPVADDTGLHNVGPSFQ
YKVRDARGQAREYSNYMLPLELDGRWYLMSGVRESPNEAFRYLRMPLDPEGKIETFMRLRGALLDPAQHPAITAAFARQA
LPQEAWGTEIEDKLKLSATQVLGLFAQGGFQSLGSFIESRVPEAEREKAAGTYLRILELAAFEALKISNRQNGLAAPQAD
EAAGWLVRDTLNSMSDIFVYGAPVYLQLMQYDEVKASGLQLTRSPGKNIVYLGSLLLTLGVFFMLYVRERRVWLRIKPGH
ALLAMSSAKHTIDFETEFAEHARALDALAK

Sequences:

>Translated_670_residues
MHTASHSFGKASFELLSSMRFAISLLSILAVASIVGTVLKQAEPYSNYLIQFGPFWFEVYKKLGLYDVYHAGWFLVILTF
LVVSTSVCIWRNAPNFVREMRTFREHVSEQSLAAFKHKHERATSESPEALAASAQRYLESRRYRVKTLQREDGVLLAAKA
GSWNRLGYLLAHSAIVMICIGGLIDGNLVFKAQQLLGLKKIETRDIPQSQVPAISRLTPANLSFRGSVQIPEGSSADIAF
LNVADGYLVQDLPFTVALKEFRIEHYSNGQPKSFESDVEIFDHAGNKLREATIAVNHPLIHDGIAIYQASFADGGTRLQL
RGWNLFAPTAESFPVQGTVYQNATLASDGGNYTLEFVDFRPFNIENLGGETTTPRDTMSVLGGSPVADDTGLHNVGPSFQ
YKVRDARGQAREYSNYMLPLELDGRWYLMSGVRESPNEAFRYLRMPLDPEGKIETFMRLRGALLDPAQHPAITAAFARQA
LPQEAWGTEIEDKLKLSATQVLGLFAQGGFQSLGSFIESRVPEAEREKAAGTYLRILELAAFEALKISNRQNGLAAPQAD
EAAGWLVRDTLNSMSDIFVYGAPVYLQLMQYDEVKASGLQLTRSPGKNIVYLGSLLLTLGVFFMLYVRERRVWLRIKPGH
ALLAMSSAKHTIDFETEFAEHARALDALAK
>Mature_670_residues
MHTASHSFGKASFELLSSMRFAISLLSILAVASIVGTVLKQAEPYSNYLIQFGPFWFEVYKKLGLYDVYHAGWFLVILTF
LVVSTSVCIWRNAPNFVREMRTFREHVSEQSLAAFKHKHERATSESPEALAASAQRYLESRRYRVKTLQREDGVLLAAKA
GSWNRLGYLLAHSAIVMICIGGLIDGNLVFKAQQLLGLKKIETRDIPQSQVPAISRLTPANLSFRGSVQIPEGSSADIAF
LNVADGYLVQDLPFTVALKEFRIEHYSNGQPKSFESDVEIFDHAGNKLREATIAVNHPLIHDGIAIYQASFADGGTRLQL
RGWNLFAPTAESFPVQGTVYQNATLASDGGNYTLEFVDFRPFNIENLGGETTTPRDTMSVLGGSPVADDTGLHNVGPSFQ
YKVRDARGQAREYSNYMLPLELDGRWYLMSGVRESPNEAFRYLRMPLDPEGKIETFMRLRGALLDPAQHPAITAAFARQA
LPQEAWGTEIEDKLKLSATQVLGLFAQGGFQSLGSFIESRVPEAEREKAAGTYLRILELAAFEALKISNRQNGLAAPQAD
EAAGWLVRDTLNSMSDIFVYGAPVYLQLMQYDEVKASGLQLTRSPGKNIVYLGSLLLTLGVFFMLYVRERRVWLRIKPGH
ALLAMSSAKHTIDFETEFAEHARALDALAK

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 74469; Mature: 74469

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTASHSFGKASFELLSSMRFAISLLSILAVASIVGTVLKQAEPYSNYLIQFGPFWFEVY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECHHHHHHH
KKLGLYDVYHAGWFLVILTFLVVSTSVCIWRNAPNFVREMRTFREHVSEQSLAAFKHKHE
HHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATSESPEALAASAQRYLESRRYRVKTLQREDGVLLAAKAGSWNRLGYLLAHSAIVMICI
HCCCCCHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GGLIDGNLVFKAQQLLGLKKIETRDIPQSQVPAISRLTPANLSFRGSVQIPEGSSADIAF
HHHCCCCHHEEHHHHHCCHHHCCCCCCHHHCCHHHCCCCCCCCEEEEEECCCCCCCCEEE
LNVADGYLVQDLPFTVALKEFRIEHYSNGQPKSFESDVEIFDHAGNKLREATIAVNHPLI
EEECCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHEEEEECCCCH
HDGIAIYQASFADGGTRLQLRGWNLFAPTAESFPVQGTVYQNATLASDGGNYTLEFVDFR
HCCCEEEEEECCCCCCEEEEECCEEECCCCCCCCCCEEEECCCEEECCCCCEEEEEEECC
PFNIENLGGETTTPRDTMSVLGGSPVADDTGLHNVGPSFQYKVRDARGQAREYSNYMLPL
CCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCEEEE
ELDGRWYLMSGVRESPNEAFRYLRMPLDPEGKIETFMRLRGALLDPAQHPAITAAFARQA
EECCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LPQEAWGTEIEDKLKLSATQVLGLFAQGGFQSLGSFIESRVPEAEREKAAGTYLRILELA
CCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AFEALKISNRQNGLAAPQADEAAGWLVRDTLNSMSDIFVYGAPVYLQLMQYDEVKASGLQ
HHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCEE
LTRSPGKNIVYLGSLLLTLGVFFMLYVRERRVWLRIKPGHALLAMSSAKHTIDFETEFAE
EECCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEECHHHHHH
HARALDALAK
HHHHHHHHCC
>Mature Secondary Structure
MHTASHSFGKASFELLSSMRFAISLLSILAVASIVGTVLKQAEPYSNYLIQFGPFWFEVY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECHHHHHHH
KKLGLYDVYHAGWFLVILTFLVVSTSVCIWRNAPNFVREMRTFREHVSEQSLAAFKHKHE
HHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATSESPEALAASAQRYLESRRYRVKTLQREDGVLLAAKAGSWNRLGYLLAHSAIVMICI
HCCCCCHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GGLIDGNLVFKAQQLLGLKKIETRDIPQSQVPAISRLTPANLSFRGSVQIPEGSSADIAF
HHHCCCCHHEEHHHHHCCHHHCCCCCCHHHCCHHHCCCCCCCCEEEEEECCCCCCCCEEE
LNVADGYLVQDLPFTVALKEFRIEHYSNGQPKSFESDVEIFDHAGNKLREATIAVNHPLI
EEECCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHEEEEECCCCH
HDGIAIYQASFADGGTRLQLRGWNLFAPTAESFPVQGTVYQNATLASDGGNYTLEFVDFR
HCCCEEEEEECCCCCCEEEEECCEEECCCCCCCCCCEEEECCCEEECCCCCEEEEEEECC
PFNIENLGGETTTPRDTMSVLGGSPVADDTGLHNVGPSFQYKVRDARGQAREYSNYMLPL
CCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCEEEE
ELDGRWYLMSGVRESPNEAFRYLRMPLDPEGKIETFMRLRGALLDPAQHPAITAAFARQA
EECCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LPQEAWGTEIEDKLKLSATQVLGLFAQGGFQSLGSFIESRVPEAEREKAAGTYLRILELA
CCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AFEALKISNRQNGLAAPQADEAAGWLVRDTLNSMSDIFVYGAPVYLQLMQYDEVKASGLQ
HHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCEE
LTRSPGKNIVYLGSLLLTLGVFFMLYVRERRVWLRIKPGHALLAMSSAKHTIDFETEFAE
EECCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEECHHHHHH
HARALDALAK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA