Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316167

Identifier: 74316167

GI number: 74316167

Start: 159208

End: 159690

Strand: Direct

Name: 74316167

Synonym: Tbd_0149

Alternate gene names: NA

Gene position: 159208-159690 (Clockwise)

Preceding gene: 74316166

Following gene: 74316174

Centisome position: 5.47

GC content: 68.53

Gene sequence:

>483_bases
ATGAGCGCGATGCTGCGGCGCGCGCTCGCATCTTGTCTCGTCTTTATCCTCGCGGCGTGTTCCGCGCTCGCGCCGAAGCC
TTTGCCGCCCGAGGTGAGCGTGGCGGCGGTCGAGGTCAGAAGCGTCGGGGTGTTCGAACAGCGGTTCGAGATCCTGCTGC
GCGTCACGAACCCGAATGCGTTCGCGCTCACGATCGAGGCGCTCGAGTTCGACCTCGAGGTCAACGGGCAGCCGTTCGCA
CGCGGCCTGTCGCCGCTTCCGACGCCGCTCGGTGCCACAGCGGAAACGGAGGTCGTGATCGAGGCGGTTACGCGCTCGGA
CGATCTGATCCGCCAGCTCGGCACGCTGGCGCGCGGACAGCTGAAACAGGGCGTGCCGTATCGTCTGCGCGGGCGGGTGA
AGACCGACAAGTCGCCGCGCTGGCTACCGTTCGAGCACGCCGGCGTCTACGGTGCTCCGCGCCCGCCGGACGGCACGATC
TGA

Upstream 100 bases:

>100_bases
TCTACAACCTCTACCACGTGCTCAACCACGCCAACATGTTCGGCGGCGGTTACGTCGCCCAGGCGCAGCGCATGACCGCG
CAGCTGCTGGCGGAAGTGCG

Downstream 100 bases:

>100_bases
AGGTTCAGGCCGCGAGTGCACGCAGCGTGGGGACCGCGAGGCCGAACGCGTCGGCGTGCGCCAGCGCGCGCTCGAGGCGG
GCCGGCGCCGAGCGGCCGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSAMLRRALASCLVFILAACSALAPKPLPPEVSVAAVEVRSVGVFEQRFEILLRVTNPNAFALTIEALEFDLEVNGQPFA
RGLSPLPTPLGATAETEVVIEAVTRSDDLIRQLGTLARGQLKQGVPYRLRGRVKTDKSPRWLPFEHAGVYGAPRPPDGTI

Sequences:

>Translated_160_residues
MSAMLRRALASCLVFILAACSALAPKPLPPEVSVAAVEVRSVGVFEQRFEILLRVTNPNAFALTIEALEFDLEVNGQPFA
RGLSPLPTPLGATAETEVVIEAVTRSDDLIRQLGTLARGQLKQGVPYRLRGRVKTDKSPRWLPFEHAGVYGAPRPPDGTI
>Mature_159_residues
SAMLRRALASCLVFILAACSALAPKPLPPEVSVAAVEVRSVGVFEQRFEILLRVTNPNAFALTIEALEFDLEVNGQPFAR
GLSPLPTPLGATAETEVVIEAVTRSDDLIRQLGTLARGQLKQGVPYRLRGRVKTDKSPRWLPFEHAGVYGAPRPPDGTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17315; Mature: 17184

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMLRRALASCLVFILAACSALAPKPLPPEVSVAAVEVRSVGVFEQRFEILLRVTNPNA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCHHHHHHHEEEEECCCCE
FALTIEALEFDLEVNGQPFARGLSPLPTPLGATAETEVVIEAVTRSDDLIRQLGTLARGQ
EEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LKQGVPYRLRGRVKTDKSPRWLPFEHAGVYGAPRPPDGTI
HHCCCCEEEECCEECCCCCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAMLRRALASCLVFILAACSALAPKPLPPEVSVAAVEVRSVGVFEQRFEILLRVTNPNA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCHHHHHHHEEEEECCCCE
FALTIEALEFDLEVNGQPFARGLSPLPTPLGATAETEVVIEAVTRSDDLIRQLGTLARGQ
EEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LKQGVPYRLRGRVKTDKSPRWLPFEHAGVYGAPRPPDGTI
HHCCCCEEEECCEECCCCCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA