| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is yniA [C]
Identifier: 74316166
GI number: 74316166
Start: 158321
End: 159211
Strand: Direct
Name: yniA [C]
Synonym: Tbd_0148
Alternate gene names: 74316166
Gene position: 158321-159211 (Clockwise)
Preceding gene: 74316165
Following gene: 74316167
Centisome position: 5.44
GC content: 70.93
Gene sequence:
>891_bases GTGAGCGGCGCGACAGCTTTCGCCGGCGCAATAGCCGAGGCGATCGCCGCGGCGACCGGCGCGCCGTTCCCGGCGAGTGC GCTCGAACCCGTCGCCGGAGGCGACACGAGCCAGGCTTTCCGGGTCGGCGACGGCGAGCGGCGTTTCTTCGTCAAGACCT GCAGCCGTGAGCGCGCGGCGATGTTCGACGCCGAGGTCGGCGCGCTGGACGCGCTGGCCGGCGTCGACGCGGTGCGCGTG CCGCGGCCGGTCTGCACGGGCGTCGCGTCCGACCGGGCTTATCTCGTCCTCGACTACCTCGACCTTCGCGCGCGCGGCGA CGCCGCGCTGCTCGGAACGCAACTCGCGCGTCTGCATCGCGCCCCGCAGCATCAGTTCGGCTGGAGCCGCGACAACTGGA TCGGCAGCACGTCGCAGCCGAACGGCTGGGCGCGCGACTGGATTGCATTCTGGCGCGAGCGGCGCCTCGGCTTCCAGTTC GAACGCGCGGCGCAGAGCGGCTACGGCGGCGCGCTGCAACGGGAGGGCGGCGCGCTCCTGGACCGGCTCGACGCCTTGTT CGACGGCTACGTTCCGCTGCCCTCGCTGCTGCACGGCGACCTTTGGGGCGGCAACCACGGCTATATCGCCGACGGCTCGC CGGTCGTGTTCGACCCGGCGAGCTACGTCGGCGATCGGGAATGCGACCTCGCGATGAGCGAACTGTTCGGCGGCTTCGCG CCAGCGTTTTATGCGGCCTACGAGGAGGCGTGGCCGCTTGATCCGGGCTACGCGGTGCGCAAGACGCTCTACAACCTCTA CCACGTGCTCAACCACGCCAACATGTTCGGCGGCGGTTACGTCGCCCAGGCGCAGCGCATGACCGCGCAGCTGCTGGCGG AAGTGCGATGA
Upstream 100 bases:
>100_bases GCCCAAGACCAAGTAAGCGTGGAATGAGGCTGTTGCCGCTCGACATCGACGCGCCCCGAGGGGCGCGTTTTGCTTGGGCG CGCCGGGGTGTGGCGCGGAC
Downstream 100 bases:
>100_bases GCGCGATGCTGCGGCGCGCGCTCGCATCTTGTCTCGTCTTTATCCTCGCGGCGTGTTCCGCGCTCGCGCCGAAGCCTTTG CCGCCCGAGGTGAGCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSGATAFAGAIAEAIAAATGAPFPASALEPVAGGDTSQAFRVGDGERRFFVKTCSRERAAMFDAEVGALDALAGVDAVRV PRPVCTGVASDRAYLVLDYLDLRARGDAALLGTQLARLHRAPQHQFGWSRDNWIGSTSQPNGWARDWIAFWRERRLGFQF ERAAQSGYGGALQREGGALLDRLDALFDGYVPLPSLLHGDLWGGNHGYIADGSPVVFDPASYVGDRECDLAMSELFGGFA PAFYAAYEEAWPLDPGYAVRKTLYNLYHVLNHANMFGGGYVAQAQRMTAQLLAEVR
Sequences:
>Translated_296_residues MSGATAFAGAIAEAIAAATGAPFPASALEPVAGGDTSQAFRVGDGERRFFVKTCSRERAAMFDAEVGALDALAGVDAVRV PRPVCTGVASDRAYLVLDYLDLRARGDAALLGTQLARLHRAPQHQFGWSRDNWIGSTSQPNGWARDWIAFWRERRLGFQF ERAAQSGYGGALQREGGALLDRLDALFDGYVPLPSLLHGDLWGGNHGYIADGSPVVFDPASYVGDRECDLAMSELFGGFA PAFYAAYEEAWPLDPGYAVRKTLYNLYHVLNHANMFGGGYVAQAQRMTAQLLAEVR >Mature_295_residues SGATAFAGAIAEAIAAATGAPFPASALEPVAGGDTSQAFRVGDGERRFFVKTCSRERAAMFDAEVGALDALAGVDAVRVP RPVCTGVASDRAYLVLDYLDLRARGDAALLGTQLARLHRAPQHQFGWSRDNWIGSTSQPNGWARDWIAFWRERRLGFQFE RAAQSGYGGALQREGGALLDRLDALFDGYVPLPSLLHGDLWGGNHGYIADGSPVVFDPASYVGDRECDLAMSELFGGFAP AFYAAYEEAWPLDPGYAVRKTLYNLYHVLNHANMFGGGYVAQAQRMTAQLLAEVR
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=289, Percent_Identity=34.6020761245675, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI11545906, Length=260, Percent_Identity=34.6153846153846, Blast_Score=129, Evalue=3e-30, Organism=Escherichia coli, GI1788019, Length=268, Percent_Identity=39.9253731343284, Blast_Score=177, Evalue=6e-46, Organism=Caenorhabditis elegans, GI212659227, Length=266, Percent_Identity=28.9473684210526, Blast_Score=113, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: NA
Molecular weight: Translated: 31958; Mature: 31827
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGATAFAGAIAEAIAAATGAPFPASALEPVAGGDTSQAFRVGDGERRFFVKTCSRERAA CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCCCCEEEHHHHCCHHHH MFDAEVGALDALAGVDAVRVPRPVCTGVASDRAYLVLDYLDLRARGDAALLGTQLARLHR HHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHC APQHQFGWSRDNWIGSTSQPNGWARDWIAFWRERRLGFQFERAAQSGYGGALQREGGALL CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHCCCHHHH DRLDALFDGYVPLPSLLHGDLWGGNHGYIADGSPVVFDPASYVGDRECDLAMSELFGGFA HHHHHHHCCCCCCHHHHHCCCCCCCCCEECCCCCEEECCHHHCCCCHHHHHHHHHHCCHH PAFYAAYEEAWPLDPGYAVRKTLYNLYHVLNHANMFGGGYVAQAQRMTAQLLAEVR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGATAFAGAIAEAIAAATGAPFPASALEPVAGGDTSQAFRVGDGERRFFVKTCSRERAA CCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCCCCEEEHHHHCCHHHH MFDAEVGALDALAGVDAVRVPRPVCTGVASDRAYLVLDYLDLRARGDAALLGTQLARLHR HHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHC APQHQFGWSRDNWIGSTSQPNGWARDWIAFWRERRLGFQFERAAQSGYGGALQREGGALL CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHCCCHHHH DRLDALFDGYVPLPSLLHGDLWGGNHGYIADGSPVVFDPASYVGDRECDLAMSELFGGFA HHHHHHHCCCCCCHHHHHCCCCCCCCCEECCCCCEEECCHHHCCCCHHHHHHHHHHCCHH PAFYAAYEEAWPLDPGYAVRKTLYNLYHVLNHANMFGGGYVAQAQRMTAQLLAEVR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]