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The map label for this gene is ybeQ [H]

Identifier: 74316163

GI number: 74316163

Start: 155875

End: 156624

Strand: Reverse

Name: ybeQ [H]

Synonym: Tbd_0145

Alternate gene names: 74316163

Gene position: 156624-155875 (Counterclockwise)

Preceding gene: 74316164

Following gene: 74316158

Centisome position: 5.38

GC content: 68.27

Gene sequence:

>750_bases
ATGGCTGCCGCCTGTCCGCTGTGCGGGAGCAAGAAAATCCGCCGCGGTTCGCTCCACGCCCATGACGGCGTGCGGCACCT
GCTGCTCGACACGCCATTGCGCTGCCGCGACTGCCGGCACCGCTTCTGGGCATTCAGCCCGCTCAAACCGCTGTTGCTGC
TCGTGCTCGTCGGCGCGCTCGTCGGAGTCACGGCCTGGCTCGCGCGTGAACAACGAACGGCAGCGCCCGCCCAGGATGCC
GCGACCGTATTGCCGCACACGCGCGCCGAGCAGGGCGACGCCGAGGCGCAGTTGCAGCTCGCCCTGCGCTACGCCGACGG
CGACGGCGTGATCCAGAATGACAAGGAAGCGGCGCGCTGGTTTGCGCTCGCGGCCAAACAAGGCCTCCCCGAAGCGCAGT
ACCGATACGGGCGCGCCTTGCTCGAAGGCCGCGGCGTCGTTCAGGACTACAAAGCTGCGTTCAGCTGGATCGAAAAACCC
GCGCAGCACGGTTACGCGAAGGCGCAATACAGCCTGGGCGAACTCTATCGCTACGGCACTGGCACCGCGATCGACAAGGC
GCGCGCCTATCTCTGGTTCAACCTCGCCGCCGCGCAGGGCATGGAGGCCGCCGCGAAAGCCCGCGACAGCCTGGTGTGGC
AGCTCAAGCCCGAGCAGATCGCCGCGATGCAGGACGAGGCCCGACGCATGAGCCAGGACGCGTCCGCAGCGCCGGCGCCT
GCCACTGCGGAACAGCAGGCGCTTCAATAA

Upstream 100 bases:

>100_bases
AAACCGGCGGCCGTGAAACTCGATCCGACCGTGAGCGCGGCCGCCGCCTCTTTCCTGAACCGGCGCGCCCGCGCCGGCTG
CAGCCGCACGCACTGAGACG

Downstream 100 bases:

>100_bases
GCGCGTGGCGCCGTCCGCGCCGCCGCCCCCTCGAGCGGCGCCTGCCGTTTCCGGGGGCCGTTTTCCCGGATCGACGCCAG
CGCACGGACTAGGGGTGGGC

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAAACPLCGSKKIRRGSLHAHDGVRHLLLDTPLRCRDCRHRFWAFSPLKPLLLLVLVGALVGVTAWLAREQRTAAPAQDA
ATVLPHTRAEQGDAEAQLQLALRYADGDGVIQNDKEAARWFALAAKQGLPEAQYRYGRALLEGRGVVQDYKAAFSWIEKP
AQHGYAKAQYSLGELYRYGTGTAIDKARAYLWFNLAAAQGMEAAAKARDSLVWQLKPEQIAAMQDEARRMSQDASAAPAP
ATAEQQALQ

Sequences:

>Translated_249_residues
MAAACPLCGSKKIRRGSLHAHDGVRHLLLDTPLRCRDCRHRFWAFSPLKPLLLLVLVGALVGVTAWLAREQRTAAPAQDA
ATVLPHTRAEQGDAEAQLQLALRYADGDGVIQNDKEAARWFALAAKQGLPEAQYRYGRALLEGRGVVQDYKAAFSWIEKP
AQHGYAKAQYSLGELYRYGTGTAIDKARAYLWFNLAAAQGMEAAAKARDSLVWQLKPEQIAAMQDEARRMSQDASAAPAP
ATAEQQALQ
>Mature_248_residues
AAACPLCGSKKIRRGSLHAHDGVRHLLLDTPLRCRDCRHRFWAFSPLKPLLLLVLVGALVGVTAWLAREQRTAAPAQDAA
TVLPHTRAEQGDAEAQLQLALRYADGDGVIQNDKEAARWFALAAKQGLPEAQYRYGRALLEGRGVVQDYKAAFSWIEKPA
QHGYAKAQYSLGELYRYGTGTAIDKARAYLWFNLAAAQGMEAAAKARDSLVWQLKPEQIAAMQDEARRMSQDASAAPAPA
TAEQQALQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=113, Percent_Identity=34.5132743362832, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87081769, Length=133, Percent_Identity=36.8421052631579, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786867, Length=132, Percent_Identity=34.8484848484849, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27278; Mature: 27147

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAACPLCGSKKIRRGSLHAHDGVRHLLLDTPLRCRDCRHRFWAFSPLKPLLLLVLVGAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VGVTAWLAREQRTAAPAQDAATVLPHTRAEQGDAEAQLQLALRYADGDGVIQNDKEAARW
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCHHHHHH
FALAAKQGLPEAQYRYGRALLEGRGVVQDYKAAFSWIEKPAQHGYAKAQYSLGELYRYGT
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GTAIDKARAYLWFNLAAAQGMEAAAKARDSLVWQLKPEQIAAMQDEARRMSQDASAAPAP
CCHHHHHHHHHEEEHHHHHCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCCCCC
ATAEQQALQ
CCCHHHHCC
>Mature Secondary Structure 
AAACPLCGSKKIRRGSLHAHDGVRHLLLDTPLRCRDCRHRFWAFSPLKPLLLLVLVGAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VGVTAWLAREQRTAAPAQDAATVLPHTRAEQGDAEAQLQLALRYADGDGVIQNDKEAARW
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCHHHHHH
FALAAKQGLPEAQYRYGRALLEGRGVVQDYKAAFSWIEKPAQHGYAKAQYSLGELYRYGT
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
GTAIDKARAYLWFNLAAAQGMEAAAKARDSLVWQLKPEQIAAMQDEARRMSQDASAAPAP
CCHHHHHHHHHEEEHHHHHCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCCCCC
ATAEQQALQ
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]