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The map label for this gene is 74316164

Identifier: 74316164

GI number: 74316164

Start: 156732

End: 157532

Strand: Reverse

Name: 74316164

Synonym: Tbd_0146

Alternate gene names: NA

Gene position: 157532-156732 (Counterclockwise)

Preceding gene: 74316168

Following gene: 74316163

Centisome position: 5.41

GC content: 69.66

Gene sequence:

>801_bases
ATGGCCGACACGCACGCCAAGATGACTCAAGCCACTCCGCAGGAAATCCTCATCGCCATTTTGGCCGGACTGCTCGCCCC
CTTGCTGGCGATCGTCCTGATCGTTCAGTTGGTGCTCGGCATCCAGAAAGACCACAAGCCCGACACGACCAGCGAAGCCG
CGCAAAAAGCGACGCTCGCACGGATCGCTCCGGTCTCGCAGCTCGCGGCAGCCGACGCCAACGCGCCCAAGGTCGAAAAG
TCGGGCCAGGAAGTCTATGAAGCGGTGTGCGCCGCGTGCCACGGCAGCGGCGCCCTCGGCGCGCCGAAGTTCGAGGCCAA
GGGCGACTGGACGGCACGGCTCGCGCAAGGCTACGACACGCTGGTCAAGCACGCGATCGAAGGCATCCGCGCGATGCCGC
CGCGCGGCGGCGCGGCCGACCTCTCCGACGTCGAAGTCGCGCGCGCGGTCGCCTATCTCGGCAACTCCGCCGGCGCCGAT
TTCAAGGCGCCCGAGGCAGCACCGGCCGGCGCGCCTGCTGCCGCGGCGGCGAGCGCGGCCAAGCCCGACCCGGCGAAAGG
CAAGGCCGTGTACGACGCCAACTGCGTCGCCTGCCACGGCACCGGCGTCGCCGGCGCACCGAAGCTCGGCGACAAGGCCG
CGTGGGGCACGCGCCTCGACCAGGGCTTCGACACCCTCTACAGCCACGCGCTCAACGGCATCCGCGGCATGCCGGCGAAG
GGCGGCAACGCTTCGCTGTCGGAAGGCGATCTCGCCAATGCGGTGGCCTACCTCGTCACCGAAGCGGGCGGCAAGCTTTA
A

Upstream 100 bases:

>100_bases
CCGCGCTGCGTCTATCGGCGAAGGCCTTCCGCGCTTTGCTGTCAGGGTGGGTTTCCTTATAATCGCGGCTTTTGCAGCCA
ACCGCCACCAAGGAACTTTC

Downstream 100 bases:

>100_bases
GGCGGCAAAACCGGCGGCCGTGAAACTCGATCCGACCGTGAGCGCGGCCGCCGCCTCTTTCCTGAACCGGCGCGCCCGCG
CCGGCTGCAGCCGCACGCAC

Product: cytochrome c5

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MADTHAKMTQATPQEILIAILAGLLAPLLAIVLIVQLVLGIQKDHKPDTTSEAAQKATLARIAPVSQLAAADANAPKVEK
SGQEVYEAVCAACHGSGALGAPKFEAKGDWTARLAQGYDTLVKHAIEGIRAMPPRGGAADLSDVEVARAVAYLGNSAGAD
FKAPEAAPAGAPAAAAASAAKPDPAKGKAVYDANCVACHGTGVAGAPKLGDKAAWGTRLDQGFDTLYSHALNGIRGMPAK
GGNASLSEGDLANAVAYLVTEAGGKL

Sequences:

>Translated_266_residues
MADTHAKMTQATPQEILIAILAGLLAPLLAIVLIVQLVLGIQKDHKPDTTSEAAQKATLARIAPVSQLAAADANAPKVEK
SGQEVYEAVCAACHGSGALGAPKFEAKGDWTARLAQGYDTLVKHAIEGIRAMPPRGGAADLSDVEVARAVAYLGNSAGAD
FKAPEAAPAGAPAAAAASAAKPDPAKGKAVYDANCVACHGTGVAGAPKLGDKAAWGTRLDQGFDTLYSHALNGIRGMPAK
GGNASLSEGDLANAVAYLVTEAGGKL
>Mature_265_residues
ADTHAKMTQATPQEILIAILAGLLAPLLAIVLIVQLVLGIQKDHKPDTTSEAAQKATLARIAPVSQLAAADANAPKVEKS
GQEVYEAVCAACHGSGALGAPKFEAKGDWTARLAQGYDTLVKHAIEGIRAMPPRGGAADLSDVEVARAVAYLGNSAGADF
KAPEAAPAGAPAAAAASAAKPDPAKGKAVYDANCVACHGTGVAGAPKLGDKAAWGTRLDQGFDTLYSHALNGIRGMPAKG
GNASLSEGDLANAVAYLVTEAGGKL

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 26736; Mature: 26604

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTHAKMTQATPQEILIAILAGLLAPLLAIVLIVQLVLGIQKDHKPDTTSEAAQKATLA
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RIAPVSQLAAADANAPKVEKSGQEVYEAVCAACHGSGALGAPKFEAKGDWTARLAQGYDT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LVKHAIEGIRAMPPRGGAADLSDVEVARAVAYLGNSAGADFKAPEAAPAGAPAAAAASAA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCC
KPDPAKGKAVYDANCVACHGTGVAGAPKLGDKAAWGTRLDQGFDTLYSHALNGIRGMPAK
CCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGNASLSEGDLANAVAYLVTEAGGKL
CCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADTHAKMTQATPQEILIAILAGLLAPLLAIVLIVQLVLGIQKDHKPDTTSEAAQKATLA
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RIAPVSQLAAADANAPKVEKSGQEVYEAVCAACHGSGALGAPKFEAKGDWTARLAQGYDT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LVKHAIEGIRAMPPRGGAADLSDVEVARAVAYLGNSAGADFKAPEAAPAGAPAAAAASAA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCC
KPDPAKGKAVYDANCVACHGTGVAGAPKLGDKAAWGTRLDQGFDTLYSHALNGIRGMPAK
CCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGNASLSEGDLANAVAYLVTEAGGKL
CCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]