| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316155
Identifier: 74316155
GI number: 74316155
Start: 146284
End: 146817
Strand: Reverse
Name: 74316155
Synonym: Tbd_0137
Alternate gene names: NA
Gene position: 146817-146284 (Counterclockwise)
Preceding gene: 74316156
Following gene: 74316154
Centisome position: 5.05
GC content: 68.16
Gene sequence:
>534_bases ATGAACTACTTCATACGCGGTGTCGCCGTGGTGGCGACGGTGGGCGCGATGAGCCTGCTCGCGTTCTCGCTGCCGTCCGG CGGGGAGGCGCGCGGCGACGGCGGCGGGCACGATCTGATGCCGCGCCAAACAAACACCAACTGGCAACAGGAGTGCGGCA GCTGTCACCTGGCCTACCCGCCGTCGCTGCTGCCGAAAGCCTCGTGGCGTCGCGTGATGGCGGACCTCGATGCGCATTTC GGCGAGAACGCGAGCCTCGAGCCGGCGACTCAGGCCGATATCCAGCGCTTTCTCGAAATCCACGCGGCCGACAGCGGCAA CAGCCGTATGGGCGACAGGGTGATGCGGCGGGCGGCACCCGCTGCGGCGCCACTGCGGATCACCGAGACACGATGGTTCG TGCGCGAGCACCATGAGGTGTCGCGGGCAACCTGGTCGCGCAAGTCGATCGGCTCGGCCGCCAACTGCGCGGCCTGCCAC CGCCAGGCCGAGCGCGGGGTATTCGAGGAAGACACGGTGAAGATCCCGCGATAA
Upstream 100 bases:
>100_bases TTTCGCCGCAATTGCATGGACGTGCTGCAACGCGAATGCAGCGCGCAGGAAAAAGGCGATTTCGTCGCCTGGCTCAGTCA GCTCAAATGAGGAGGACGAC
Downstream 100 bases:
>100_bases GCTGACGCGATGCGCATACTCCTGGTCGAAGACGACGCCCTGTTGGGCGACGGCCTCAAGGCCGGGCTCTCGCAATCGGG CTTTGCCGTCGACTGGCTGC
Product: diheme cytochrome c
Products: NA
Alternate protein names: Lipoprotein; Dihem Cytochrome C; DHC Diheme Cytochrome C; Cytochrome B; Multihaem Cytochrome; Transcriptional Regulator; Dihaem Cytochrome C; Diheme Cytochrome C
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNYFIRGVAVVATVGAMSLLAFSLPSGGEARGDGGGHDLMPRQTNTNWQQECGSCHLAYPPSLLPKASWRRVMADLDAHF GENASLEPATQADIQRFLEIHAADSGNSRMGDRVMRRAAPAAAPLRITETRWFVREHHEVSRATWSRKSIGSAANCAACH RQAERGVFEEDTVKIPR
Sequences:
>Translated_177_residues MNYFIRGVAVVATVGAMSLLAFSLPSGGEARGDGGGHDLMPRQTNTNWQQECGSCHLAYPPSLLPKASWRRVMADLDAHF GENASLEPATQADIQRFLEIHAADSGNSRMGDRVMRRAAPAAAPLRITETRWFVREHHEVSRATWSRKSIGSAANCAACH RQAERGVFEEDTVKIPR >Mature_177_residues MNYFIRGVAVVATVGAMSLLAFSLPSGGEARGDGGGHDLMPRQTNTNWQQECGSCHLAYPPSLLPKASWRRVMADLDAHF GENASLEPATQADIQRFLEIHAADSGNSRMGDRVMRRAAPAAAPLRITETRWFVREHHEVSRATWSRKSIGSAANCAACH RQAERGVFEEDTVKIPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19428; Mature: 19428
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYFIRGVAVVATVGAMSLLAFSLPSGGEARGDGGGHDLMPRQTNTNWQQECGSCHLAYP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCCC PSLLPKASWRRVMADLDAHFGENASLEPATQADIQRFLEIHAADSGNSRMGDRVMRRAAP CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC AAAPLRITETRWFVREHHEVSRATWSRKSIGSAANCAACHRQAERGVFEEDTVKIPR CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCC >Mature Secondary Structure MNYFIRGVAVVATVGAMSLLAFSLPSGGEARGDGGGHDLMPRQTNTNWQQECGSCHLAYP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCCC PSLLPKASWRRVMADLDAHFGENASLEPATQADIQRFLEIHAADSGNSRMGDRVMRRAAP CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC AAAPLRITETRWFVREHHEVSRATWSRKSIGSAANCAACHRQAERGVFEEDTVKIPR CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA