| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316071
Identifier: 74316071
GI number: 74316071
Start: 55791
End: 56756
Strand: Reverse
Name: 74316071
Synonym: Tbd_0053
Alternate gene names: NA
Gene position: 56756-55791 (Counterclockwise)
Preceding gene: 74316072
Following gene: 74316067
Centisome position: 1.95
GC content: 69.25
Gene sequence:
>966_bases ATGCAGATCGAATGTTACGCGCAGCGCCTGCTCAATCCGTTTCGCGGGGTCGTCCAAGTCATCCGCTACGCTTCGGCCGA AGCCGTGACAACCGACGGCGTCGAGTGGGATATCTACGTCGCCAACGATGCGCTGCTCGAGGGCCTCGGCCGTGCGGGCA GGCGCGCGCAGATTTCGGACATCCGCTACGGCCACTGGTCCGCACAGACGGGGCTCAAGCGCGGACCGCTCTATCCTTCC GACGACTTCAAGCGTCTCGAGGAGATGGGCGCCGTGGTGTACGAGCATCTGCTCGCGGTGCATCGCGACGTACCCTTCAA GTTCCGCGACCGGTTCGAACTGTGGCTGCTCGACCGCGCAGACCGGCCGCTCGCCTTGCTGCATAGCGTCTGCAACGCGA GCGAGACCGACACCCGGCCGCCGCTCGACTGGCGTGCCGGCATGGCCGCGACCGCCAGTTTTCGCAGTACGGCCGTGGCG GAGTCGACAGAATCGGCGGCGGCTTGTCTCACCCGCGCCGTCAACGGTCTGGCGAGCGGCGTCGCGCAGTGGTTCCGGCG CAGCGACGACGGCGCCGCCCTCGGGCTGCACACGCTGCGCGGGGGTGAGCCCCTGCGCGGCCGCGTGCTCGACGCCGACG CCTTTCCGGCGCTCTTCCTCGCGACGCGCGAGATGGACCCCACGCAGGCGCAGCTCGTCGACGACTACCATGCCTGGCAG GCGCCCTGGCTATTGCTGCTTGCCGACCTCGACGACGCCACGCGCCACGCCCTCGAAGCGCGCGCCTGCGAGCAGGGCGA ACTGCTGGAAAAACACTGCCGCCTCTACCCGCGTGTGATCGACCGCCCGGCCCTGCAGGCCGCGCGCGTCGCCGCGGCAC TCGCGCGCACGACGCCACCCTCGAGCCGGCGCGACGAGATCTTTTCGCTCGATTACCTCGAACTCGGTCTGAGCGCCAGG GAGTGA
Upstream 100 bases:
>100_bases TCGAGGAAGCCATGCGCGCGTCGCTGTTCGCGTGGATGAGCACGTCGCCCCGCGGGGGCGCGGCGCCGCCGACCTGAAGC CCCCTAACCGCGGAGCCTCC
Downstream 100 bases:
>100_bases AGGCGGGGCGGCGTTTGCTACGGAGAACTGGCCGGCGCTTGCCCGAGCGCTCCGGCCTGTCCGCCCGACATGCGGGCGTA AAAACGCGGTCGGGGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR E
Sequences:
>Translated_321_residues MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR E >Mature_321_residues MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISDIRYGHWSAQTGLKRGPLYPS DDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRADRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVA ESTESAAACLTRAVNGLASGVAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPPSSRRDEIFSLDYLELGLSAR E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35740; Mature: 35740
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISD CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCCCCC IRYGHWSAQTGLKRGPLYPSDDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRA CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVAESTESAAACLTRAVNGLASG CCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ HHHHHHCCCCCCEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHC APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPP CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC SSRRDEIFSLDYLELGLSARE CCCCCCCEECHHHHHCCCCCC >Mature Secondary Structure MQIECYAQRLLNPFRGVVQVIRYASAEAVTTDGVEWDIYVANDALLEGLGRAGRRAQISD CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCCCCC IRYGHWSAQTGLKRGPLYPSDDFKRLEEMGAVVYEHLLAVHRDVPFKFRDRFELWLLDRA CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DRPLALLHSVCNASETDTRPPLDWRAGMAATASFRSTAVAESTESAAACLTRAVNGLASG CCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQWFRRSDDGAALGLHTLRGGEPLRGRVLDADAFPALFLATREMDPTQAQLVDDYHAWQ HHHHHHCCCCCCEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHC APWLLLLADLDDATRHALEARACEQGELLEKHCRLYPRVIDRPALQAARVAAALARTTPP CCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC SSRRDEIFSLDYLELGLSARE CCCCCCCEECHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA